RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 NISCHQ9Y2I1 1504 aa35.5■■■■□ 3.27
SMURF1-203ENST00000472627 ABCC9O60706 1549 aa32.62■■■□□ 2.81
SMURF1-203ENST00000472627 CCDC180Q9P1Z9 1646 aa32.14■■■□□ 2.74
SMURF1-203ENST00000472627 DNAJC5BQ9UF47 199 aa30.95■■■□□ 2.55
SMURF1-203ENST00000472627 RB1CC1Q8TDY2 1594 aa30.89■■■□□ 2.54
SMURF1-203ENST00000472627 NACADO15069 1562 aa30.54■■■□□ 2.48
SMURF1-203ENST00000472627 DCAF8L2P0C7V8 631 aa30.26■■■□□ 2.43
SMURF1-203ENST00000472627 PABPN1Q86U42 306 aaKnown RBP eCLIP30.26■■■□□ 2.432e-6■■■■□ 23
SMURF1-203ENST00000472627 UNC13AQ9UPW8 1703 aa30.02■■■□□ 2.4
SMURF1-203ENST00000472627 MYO15BQ96JP2 1530 aa29.94■■■□□ 2.38
SMURF1-203ENST00000472627 BICRAQ9NZM4 1560 aa29.86■■■□□ 2.37
SMURF1-203ENST00000472627 SHROOM4Q9ULL8 1493 aa29.61■■■□□ 2.33
SMURF1-203ENST00000472627 CECR2Q9BXF3 1484 aa29.48■■■□□ 2.31
SMURF1-203ENST00000472627 CC2D2AQ9P2K1 1620 aa29.43■■■□□ 2.3
SMURF1-203ENST00000472627 DCAF1Q9Y4B6 1507 aa29.34■■■□□ 2.29
SMURF1-203ENST00000472627 ZCCHC6Q5VYS8 1495 aaKnown RBP29.3■■■□□ 2.28
SMURF1-203ENST00000472627 EIF4G1Q04637 1599 aaKnown RBP29.26■■■□□ 2.27
SMURF1-203ENST00000472627 SCRIBQ14160 1630 aa29.2■■■□□ 2.26
SMURF1-203ENST00000472627 DNAJC5Q9H3Z4 198 aa28.97■■■□□ 2.23
SMURF1-203ENST00000472627 CUX2O14529 1486 aa28.43■■■□□ 2.14
SMURF1-203ENST00000472627 ERCC6Q03468 1493 aa28.32■■■□□ 2.12
SMURF1-203ENST00000472627 NCAPD3P42695 1498 aa28.16■■■□□ 2.1
SMURF1-203ENST00000472627 ATAD2BQ9ULI0 1458 aa27.97■■■□□ 2.07
SMURF1-203ENST00000472627 SMARCA2P51531 1590 aa27.94■■■□□ 2.06
SMURF1-203ENST00000472627 HMGXB3Q12766 1538 aa27.92■■■□□ 2.06
SMURF1-203ENST00000472627 NESP48681 1621 aa27.81■■■□□ 2.04
SMURF1-203ENST00000472627 SMARCA4P51532 1647 aa27.8■■■□□ 2.04
SMURF1-203ENST00000472627 BAZ1BQ9UIG0 1483 aaKnown RBP27.74■■■□□ 2.03
SMURF1-203ENST00000472627 THOC2Q8NI27 1593 aaKnown RBP27.68■■■□□ 2.02
SMURF1-203ENST00000472627 BAZ1AQ9NRL2 1556 aaPredicted RBP27.65■■■□□ 2.02
SMURF1-203ENST00000472627 LAMC3Q9Y6N6 1575 aa27.65■■■□□ 2.02
SMURF1-203ENST00000472627 PDS5BQ9NTI5 1447 aa27.56■■■□□ 2
SMURF1-203ENST00000472627 PEG3Q9GZU2 1588 aa27.55■■■□□ 2
SMURF1-203ENST00000472627 TRIM41Q8WV44 630 aa27.51■■□□□ 1.99
SMURF1-203ENST00000472627 KIF21AQ7Z4S6 1674 aa27.45■■□□□ 1.98
SMURF1-203ENST00000472627 MRC2Q9UBG0 1479 aa27.3■■□□□ 1.96
SMURF1-203ENST00000472627 CADPSQ9ULU8 1353 aa27.29■■□□□ 1.96
SMURF1-203ENST00000472627 MROH2BQ7Z745 1585 aa27.29■■□□□ 1.96
SMURF1-203ENST00000472627 WDR62O43379 1518 aa27.22■■□□□ 1.95
SMURF1-203ENST00000472627 CEP164Q9UPV0 1460 aa27.1■■□□□ 1.93
SMURF1-203ENST00000472627 OSCARQ8IYS5 282 aa27.04■■□□□ 1.92
SMURF1-203ENST00000472627 FANCD2Q9BXW9 1451 aa26.99■■□□□ 1.91
SMURF1-203ENST00000472627 WIZO95785 1651 aa26.92■■□□□ 1.9
SMURF1-203ENST00000472627 CFTRP13569 1480 aa26.85■■□□□ 1.89
SMURF1-203ENST00000472627 URB2Q14146 1524 aaKnown RBP26.73■■□□□ 1.87
SMURF1-203ENST00000472627 RIMBP3CA6NJZ7 1639 aa26.66■■□□□ 1.86
SMURF1-203ENST00000472627 RIMBP3BA6NNM3 1639 aa26.66■■□□□ 1.86
SMURF1-203ENST00000472627 RIMBP3Q9UFD9 1639 aa26.66■■□□□ 1.86
SMURF1-203ENST00000472627 TOP2AP11388 1531 aaKnown RBP26.64■■□□□ 1.85
SMURF1-203ENST00000472627 IFT140Q96RY7 1462 aa26.58■■□□□ 1.85
SMURF1-203ENST00000472627 RSF1Q96T23 1441 aaPredicted RBP26.56■■□□□ 1.84
SMURF1-203ENST00000472627 ARHGEF11O15085 1522 aa26.55■■□□□ 1.84
SMURF1-203ENST00000472627 PRDM2Q13029 1718 aa26.52■■□□□ 1.84
SMURF1-203ENST00000472627 ZNF608Q9ULD9 1512 aaPredicted RBP26.48■■□□□ 1.83
SMURF1-203ENST00000472627 CYB5RLQ6IPT4 315 aa26.41■■□□□ 1.82
SMURF1-203ENST00000472627 ABCC8Q09428 1581 aa26.41■■□□□ 1.82
SMURF1-203ENST00000472627 TOPBP1Q92547 1522 aa26.39■■□□□ 1.81
SMURF1-203ENST00000472627 TRHP20396 242 aaPredicted RBP26.36■■□□□ 1.81
SMURF1-203ENST00000472627 EIF4G3O43432 1585 aaKnown RBP26.36■■□□□ 1.81
SMURF1-203ENST00000472627 CCDC88BA6NC98 1476 aa26.29■■□□□ 1.8
SMURF1-203ENST00000472627 DNMBPQ6XZF7 1577 aa26.27■■□□□ 1.8
SMURF1-203ENST00000472627 FBLN2P98095 1184 aa26.23■■□□□ 1.79
SMURF1-203ENST00000472627 CHD1O14646 1710 aa26.22■■□□□ 1.79
SMURF1-203ENST00000472627 ARAP1Q96P48 1450 aa26.22■■□□□ 1.79
SMURF1-203ENST00000472627 AQRO60306 1485 aaKnown RBP eCLIP26.2■■□□□ 1.789e-7■■□□□ 14.3
SMURF1-203ENST00000472627 TARBP1Q13395 1621 aaKnown RBP26.15■■□□□ 1.78
SMURF1-203ENST00000472627 POLA1P09884 1462 aaPredicted RBP26.08■■□□□ 1.77
SMURF1-203ENST00000472627 AEBP2Q6ZN18 517 aaPredicted RBP26.06■■□□□ 1.76
SMURF1-203ENST00000472627 WDR97A6NE52 1622 aa25.99■■□□□ 1.75
SMURF1-203ENST00000472627 SOGA1O94964 1423 aa25.98■■□□□ 1.75
SMURF1-203ENST00000472627 SYNJ1O43426 1573 aa25.97■■□□□ 1.75
SMURF1-203ENST00000472627 TDRD9Q8NDG6 1382 aaKnown RBP25.96■■□□□ 1.75
SMURF1-203ENST00000472627 CHMP7Q8WUX9 453 aaPredicted RBP25.96■■□□□ 1.75
SMURF1-203ENST00000472627 SNAPC4Q5SXM2 1469 aa25.96■■□□□ 1.75
SMURF1-203ENST00000472627 RAD54L2Q9Y4B4 1467 aa25.95■■□□□ 1.74
SMURF1-203ENST00000472627 CLASP1Q7Z460 1538 aa25.93■■□□□ 1.74
SMURF1-203ENST00000472627 MAGI1Q96QZ7 1491 aaPredicted RBP25.91■■□□□ 1.74
SMURF1-203ENST00000472627 GRIN2BQ13224 1484 aa25.85■■□□□ 1.73
SMURF1-203ENST00000472627 FGD5Q6ZNL6 1462 aa25.85■■□□□ 1.73
SMURF1-203ENST00000472627 SYNJ2O15056 1496 aa25.82■■□□□ 1.72
SMURF1-203ENST00000472627 GAPVD1Q14C86 1478 aa25.74■■□□□ 1.71
SMURF1-203ENST00000472627 CUX1P39880 1505 aa25.69■■□□□ 1.7
SMURF1-203ENST00000472627 PBRM1Q86U86 1689 aa25.64■■□□□ 1.69
SMURF1-203ENST00000472627 ABCA10Q8WWZ4 1543 aa25.53■■□□□ 1.68
SMURF1-203ENST00000472627 ABCA5Q8WWZ7 1642 aa25.52■■□□□ 1.68
SMURF1-203ENST00000472627 GRIN2AQ12879 1464 aa25.49■■□□□ 1.67
SMURF1-203ENST00000472627 CEP170Q5SW79 1584 aa25.42■■□□□ 1.66
SMURF1-203ENST00000472627 ERCC6L2Q5T890 1561 aa25.41■■□□□ 1.66
SMURF1-203ENST00000472627 NUP160Q12769 1436 aa25.4■■□□□ 1.66
SMURF1-203ENST00000472627 ADAMTS12P58397 1594 aa25.39■■□□□ 1.65
SMURF1-203ENST00000472627 WRNQ14191 1432 aaPredicted RBP eCLIP25.38■■□□□ 1.65
SMURF1-203ENST00000472627 FHAD1B1AJZ9 1412 aa25.33■■□□□ 1.65
SMURF1-203ENST00000472627 SHROOM2Q13796 1616 aa25.33■■□□□ 1.65
SMURF1-203ENST00000472627 KIF13AQ9H1H9 1805 aa25.25■■□□□ 1.63
SMURF1-203ENST00000472627 ERICH3Q5RHP9 1530 aa25.23■■□□□ 1.63
SMURF1-203ENST00000472627 NPM1P06748 294 aaKnown RBP eCLIP25.23■■□□□ 1.63
SMURF1-203ENST00000472627 PRG4Q92954 1404 aaPredicted RBP25.22■■□□□ 1.63
SMURF1-203ENST00000472627 TOP2BQ02880 1626 aa25.17■■□□□ 1.62
SMURF1-203ENST00000472627 FAM69CQ0P6D2 419 aa25.17■■□□□ 1.62
SMURF1-203ENST00000472627 BIVM-ERCC5R4GMW8 1640 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms