RNA–Protein interactions for RNA: ENST00000567988.5

FANCA-229, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 915 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-229ENST00000567988 NISCHQ9Y2I1 1504 aa30.32■■■□□ 2.44
FANCA-229ENST00000567988 CCDC180Q9P1Z9 1646 aa26.97■■□□□ 1.91
FANCA-229ENST00000567988 ABCC9O60706 1549 aa26.33■■□□□ 1.81
FANCA-229ENST00000567988 NACADO15069 1562 aa25.35■■□□□ 1.65
FANCA-229ENST00000567988 RB1CC1Q8TDY2 1594 aa25.34■■□□□ 1.65
FANCA-229ENST00000567988 MYO15BQ96JP2 1530 aa25.3■■□□□ 1.64
FANCA-229ENST00000567988 ZCCHC6Q5VYS8 1495 aaKnown RBP25.29■■□□□ 1.64
FANCA-229ENST00000567988 DCAF1Q9Y4B6 1507 aa25.17■■□□□ 1.62
FANCA-229ENST00000567988 DCAF8L2P0C7V8 631 aa25.03■■□□□ 1.6
FANCA-229ENST00000567988 UNC13AQ9UPW8 1703 aa24.8■■□□□ 1.56
FANCA-229ENST00000567988 BICRAQ9NZM4 1560 aa24.7■■□□□ 1.54
FANCA-229ENST00000567988 PABPN1Q86U42 306 aaKnown RBP eCLIP24.55■■□□□ 1.525e-8■■■■□ 22.6
FANCA-229ENST00000567988 SCRIBQ14160 1630 aa24.52■■□□□ 1.52
FANCA-229ENST00000567988 SHROOM4Q9ULL8 1493 aa24.44■■□□□ 1.5
FANCA-229ENST00000567988 DNAJC5BQ9UF47 199 aa24.28■■□□□ 1.48
FANCA-229ENST00000567988 EIF4G1Q04637 1599 aaKnown RBP23.98■■□□□ 1.43
FANCA-229ENST00000567988 CC2D2AQ9P2K1 1620 aa23.85■■□□□ 1.41
FANCA-229ENST00000567988 CECR2Q9BXF3 1484 aa23.68■■□□□ 1.38
FANCA-229ENST00000567988 SMARCA4P51532 1647 aa23.52■■□□□ 1.36
FANCA-229ENST00000567988 BAZ1AQ9NRL2 1556 aaPredicted RBP23.47■■□□□ 1.35
FANCA-229ENST00000567988 NCAPD3P42695 1498 aa23.43■■□□□ 1.34
FANCA-229ENST00000567988 ATAD2BQ9ULI0 1458 aa23.42■■□□□ 1.34
FANCA-229ENST00000567988 PEG3Q9GZU2 1588 aa23.38■■□□□ 1.33
FANCA-229ENST00000567988 MROH2BQ7Z745 1585 aa23.36■■□□□ 1.33
FANCA-229ENST00000567988 SMARCA2P51531 1590 aa23.34■■□□□ 1.33
FANCA-229ENST00000567988 HMGXB3Q12766 1538 aa23.32■■□□□ 1.32
FANCA-229ENST00000567988 BAZ1BQ9UIG0 1483 aaKnown RBP23.15■■□□□ 1.3
FANCA-229ENST00000567988 RSF1Q96T23 1441 aaPredicted RBP23.09■■□□□ 1.29
FANCA-229ENST00000567988 WIZO95785 1651 aa23.06■■□□□ 1.28
FANCA-229ENST00000567988 TOP2AP11388 1531 aaKnown RBP22.85■■□□□ 1.25
FANCA-229ENST00000567988 NESP48681 1621 aa22.82■■□□□ 1.24
FANCA-229ENST00000567988 LAMC3Q9Y6N6 1575 aa22.76■■□□□ 1.23
FANCA-229ENST00000567988 CADPSQ9ULU8 1353 aa22.69■■□□□ 1.22
FANCA-229ENST00000567988 ERCC6Q03468 1493 aa22.62■■□□□ 1.21
FANCA-229ENST00000567988 CFTRP13569 1480 aa22.6■■□□□ 1.21
FANCA-229ENST00000567988 CCDC88BA6NC98 1476 aa22.57■■□□□ 1.2
FANCA-229ENST00000567988 PDS5BQ9NTI5 1447 aa22.57■■□□□ 1.2
FANCA-229ENST00000567988 THOC2Q8NI27 1593 aaKnown RBP22.55■■□□□ 1.2
FANCA-229ENST00000567988 CUX2O14529 1486 aa22.53■■□□□ 1.2
FANCA-229ENST00000567988 KIF21AQ7Z4S6 1674 aa22.52■■□□□ 1.2
FANCA-229ENST00000567988 FANCD2Q9BXW9 1451 aa22.41■■□□□ 1.18
FANCA-229ENST00000567988 MRC2Q9UBG0 1479 aa22.37■■□□□ 1.17
FANCA-229ENST00000567988 CEP164Q9UPV0 1460 aa22.36■■□□□ 1.17
FANCA-229ENST00000567988 WDR62O43379 1518 aa22.36■■□□□ 1.17
FANCA-229ENST00000567988 PRDM2Q13029 1718 aa22.35■■□□□ 1.17
FANCA-229ENST00000567988 URB2Q14146 1524 aaKnown RBP22.25■■□□□ 1.15
FANCA-229ENST00000567988 SUPT5HO00267 1087 aaKnown RBP22.24■■□□□ 1.15
FANCA-229ENST00000567988 TOPBP1Q92547 1522 aa22.07■■□□□ 1.12
FANCA-229ENST00000567988 DNMBPQ6XZF7 1577 aa22.04■■□□□ 1.12
FANCA-229ENST00000567988 ABCC8Q09428 1581 aa22.04■■□□□ 1.12
FANCA-229ENST00000567988 IFT140Q96RY7 1462 aa21.93■■□□□ 1.1
FANCA-229ENST00000567988 CUX1P39880 1505 aa21.92■■□□□ 1.1
FANCA-229ENST00000567988 POLA1P09884 1462 aaPredicted RBP21.9■■□□□ 1.1
FANCA-229ENST00000567988 TARBP1Q13395 1621 aaKnown RBP21.88■■□□□ 1.09
FANCA-229ENST00000567988 ZNF608Q9ULD9 1512 aaPredicted RBP21.85■■□□□ 1.09
FANCA-229ENST00000567988 DNAJC5Q9H3Z4 198 aa21.84■■□□□ 1.09
FANCA-229ENST00000567988 FGD5Q6ZNL6 1462 aa21.81■■□□□ 1.08
FANCA-229ENST00000567988 RAD54L2Q9Y4B4 1467 aa21.77■■□□□ 1.07
FANCA-229ENST00000567988 EIF4G3O43432 1585 aaKnown RBP21.75■■□□□ 1.07
FANCA-229ENST00000567988 SOGA1O94964 1423 aa21.73■■□□□ 1.07
FANCA-229ENST00000567988 BIVM-ERCC5R4GMW8 1640 aa21.72■■□□□ 1.07
FANCA-229ENST00000567988 SYNJ1O43426 1573 aa21.71■■□□□ 1.07
FANCA-229ENST00000567988 TOP2BQ02880 1626 aa21.71■■□□□ 1.07
FANCA-229ENST00000567988 WRNQ14191 1432 aaPredicted RBP eCLIP21.71■■□□□ 1.07
FANCA-229ENST00000567988 WDR97A6NE52 1622 aa21.69■■□□□ 1.06
FANCA-229ENST00000567988 AQRO60306 1485 aaKnown RBP eCLIP21.69■■□□□ 1.062e-6■■■■■ 28.6
FANCA-229ENST00000567988 ABCA10Q8WWZ4 1543 aa21.65■■□□□ 1.06
FANCA-229ENST00000567988 TDRD9Q8NDG6 1382 aaKnown RBP21.61■■□□□ 1.05
FANCA-229ENST00000567988 ABCA5Q8WWZ7 1642 aa21.57■■□□□ 1.04
FANCA-229ENST00000567988 GRIN2BQ13224 1484 aa21.52■■□□□ 1.03
FANCA-229ENST00000567988 GAPVD1Q14C86 1478 aa21.51■■□□□ 1.03
FANCA-229ENST00000567988 SNAPC4Q5SXM2 1469 aa21.49■■□□□ 1.03
FANCA-229ENST00000567988 MAGI1Q96QZ7 1491 aaPredicted RBP21.49■■□□□ 1.03
FANCA-229ENST00000567988 OSCARQ8IYS5 282 aa21.47■■□□□ 1.03
FANCA-229ENST00000567988 PBRM1Q86U86 1689 aa21.45■■□□□ 1.02
FANCA-229ENST00000567988 CHD1O14646 1710 aa21.43■■□□□ 1.02
FANCA-229ENST00000567988 SYNJ2O15056 1496 aa21.39■■□□□ 1.02
FANCA-229ENST00000567988 ERICH3Q5RHP9 1530 aa21.37■■□□□ 1.01
FANCA-229ENST00000567988 ADAMTS12P58397 1594 aa21.34■■□□□ 1.01
FANCA-229ENST00000567988 CLASP1Q7Z460 1538 aa21.32■■□□□ 1
FANCA-229ENST00000567988 FHAD1B1AJZ9 1412 aa21.27■■□□□ 1
FANCA-229ENST00000567988 GRIN2AQ12879 1464 aa21.26■□□□□ 0.99
FANCA-229ENST00000567988 FBLN2P98095 1184 aa21.25■□□□□ 0.99
FANCA-229ENST00000567988 CHMP7Q8WUX9 453 aaPredicted RBP21.25■□□□□ 0.99
FANCA-229ENST00000567988 KIF27Q86VH2 1401 aa21.23■□□□□ 0.99
FANCA-229ENST00000567988 ARHGEF11O15085 1522 aa21.23■□□□□ 0.99
FANCA-229ENST00000567988 IGF1RP08069 1367 aa21.23■□□□□ 0.99
FANCA-229ENST00000567988 NUP160Q12769 1436 aa21.22■□□□□ 0.99
FANCA-229ENST00000567988 RIMBP3CA6NJZ7 1639 aa21.22■□□□□ 0.99
FANCA-229ENST00000567988 RIMBP3BA6NNM3 1639 aa21.22■□□□□ 0.99
FANCA-229ENST00000567988 RIMBP3Q9UFD9 1639 aa21.22■□□□□ 0.99
FANCA-229ENST00000567988 CEP170Q5SW79 1584 aa21.18■□□□□ 0.98
FANCA-229ENST00000567988 CUL7Q14999 1698 aa21.12■□□□□ 0.97
FANCA-229ENST00000567988 RUSC2Q8N2Y8 1516 aa21.09■□□□□ 0.97
FANCA-229ENST00000567988 ARAP1Q96P48 1450 aa21.08■□□□□ 0.97
FANCA-229ENST00000567988 SHROOM2Q13796 1616 aa21.07■□□□□ 0.96
FANCA-229ENST00000567988 CARMIL1Q5VZK9 1371 aa21.03■□□□□ 0.96
FANCA-229ENST00000567988 TRIM41Q8WV44 630 aa21.03■□□□□ 0.96
FANCA-229ENST00000567988 ERCC6L2Q5T890 1561 aa20.98■□□□□ 0.95
FANCA-229ENST00000567988 KIAA0586Q9BVV6 1533 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms