RNA–Protein interactions for RNA: ENST00000230901.9

BRD8-201, Transcript of bromodomain containing 8, humanhuman

TSL 1 (best) BASIC

Gene BRD8, Length 3,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD8-201ENST00000230901 NISCHQ9Y2I1 1504 aa15.63■□□□□ 0.09
BRD8-201ENST00000230901 HRCP23327 699 aa13.46□□□□□ -0.25
BRD8-201ENST00000230901 CCDC180Q9P1Z9 1646 aa13.45□□□□□ -0.26
BRD8-201ENST00000230901 MYO15BQ96JP2 1530 aa13.27□□□□□ -0.29
BRD8-201ENST00000230901 SHROOM4Q9ULL8 1493 aa13.18□□□□□ -0.3
BRD8-201ENST00000230901 ZCCHC6Q5VYS8 1495 aaKnown RBP13.17□□□□□ -0.3
BRD8-201ENST00000230901 SUPT5HO00267 1087 aaKnown RBP13.1□□□□□ -0.31
BRD8-201ENST00000230901 PPARGC1BQ86YN6 1023 aaKnown RBP13.09□□□□□ -0.31
BRD8-201ENST00000230901 CHIC1Q5VXU3 224 aa13.08□□□□□ -0.32
BRD8-201ENST00000230901 PCGF6Q9BYE7 350 aa13.05□□□□□ -0.32
BRD8-201ENST00000230901 DCAF1Q9Y4B6 1507 aa13.02□□□□□ -0.33
BRD8-201ENST00000230901 DCAF8L2P0C7V8 631 aa12.95□□□□□ -0.34
BRD8-201ENST00000230901 PELP1Q8IZL8 1130 aaKnown RBP12.94□□□□□ -0.34
BRD8-201ENST00000230901 TRIM26Q12899 539 aaPredicted RBP12.73□□□□□ -0.37
BRD8-201ENST00000230901 SCAF1Q9H7N4 1312 aaKnown RBP12.72□□□□□ -0.37
BRD8-201ENST00000230901 LOC105371045A0A1W2PR82 267 aa12.68□□□□□ -0.38
BRD8-201ENST00000230901 ZEB1P37275 1124 aaPredicted RBP12.63□□□□□ -0.39
BRD8-201ENST00000230901 ABCC9O60706 1549 aa12.55□□□□□ -0.4
BRD8-201ENST00000230901 NACADO15069 1562 aa12.49□□□□□ -0.41
BRD8-201ENST00000230901 SCRIBQ14160 1630 aa12.47□□□□□ -0.41
BRD8-201ENST00000230901 MYT1Q01538 1121 aa12.42□□□□□ -0.42
BRD8-201ENST00000230901 ACIN1Q9UKV3 1341 aaKnown RBP12.4□□□□□ -0.42
BRD8-201ENST00000230901 NEUROD1Q13562 356 aa12.34□□□□□ -0.43
BRD8-201ENST00000230901 RB1CC1Q8TDY2 1594 aa12.33□□□□□ -0.44
BRD8-201ENST00000230901 RSF1Q96T23 1441 aaPredicted RBP12.25□□□□□ -0.45
BRD8-201ENST00000230901 GTF3C3Q9Y5Q9 886 aa12.22□□□□□ -0.45
BRD8-201ENST00000230901 TRIM41Q8WV44 630 aa12.17□□□□□ -0.46
BRD8-201ENST00000230901 CECR2Q9BXF3 1484 aa12.14□□□□□ -0.47
BRD8-201ENST00000230901 CENPBP07199 599 aaPredicted RBP12.13□□□□□ -0.47
BRD8-201ENST00000230901 DIEXFQ68CQ4 756 aaKnown RBP12.13□□□□□ -0.47
BRD8-201ENST00000230901 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.1□□□□□ -0.47
BRD8-201ENST00000230901 MROH2BQ7Z745 1585 aa12.09□□□□□ -0.47
BRD8-201ENST00000230901 UNC13AQ9UPW8 1703 aa12.07□□□□□ -0.48
BRD8-201ENST00000230901 FAM9AQ8IZU1 332 aaPredicted RBP12.06□□□□□ -0.48
BRD8-201ENST00000230901 BAZ1AQ9NRL2 1556 aaPredicted RBP12.05□□□□□ -0.48
BRD8-201ENST00000230901 CCER1Q8TC90 406 aaPredicted RBP12.04□□□□□ -0.48
BRD8-201ENST00000230901 EIF4G1Q04637 1599 aaKnown RBP12.02□□□□□ -0.49
BRD8-201ENST00000230901 WRNQ14191 1432 aaPredicted RBP eCLIP12.02□□□□□ -0.49
BRD8-201ENST00000230901 WIZO95785 1651 aa12.01□□□□□ -0.49
BRD8-201ENST00000230901 SMARCA4P51532 1647 aa11.95□□□□□ -0.5
BRD8-201ENST00000230901 ZNF316A6NFI3 1004 aaPredicted RBP11.94□□□□□ -0.5
BRD8-201ENST00000230901 PABPN1Q86U42 306 aaKnown RBP eCLIP11.93□□□□□ -0.53e-6■■■■□ 23.3
BRD8-201ENST00000230901 BICRAQ9NZM4 1560 aa11.93□□□□□ -0.5
BRD8-201ENST00000230901 EHMT2Q96KQ7 1210 aa11.91□□□□□ -0.5
BRD8-201ENST00000230901 TOP2AP11388 1531 aaKnown RBP11.88□□□□□ -0.51
BRD8-201ENST00000230901 MIER1Q8N108 512 aa11.85□□□□□ -0.51
BRD8-201ENST00000230901 CEP162Q5TB80 1403 aa11.83□□□□□ -0.52
BRD8-201ENST00000230901 YTHDC1Q96MU7 727 aaKnown RBP11.79□□□□□ -0.52
BRD8-201ENST00000230901 TNIKQ9UKE5 1360 aa11.79□□□□□ -0.52
BRD8-201ENST00000230901 CCDC88BA6NC98 1476 aa11.79□□□□□ -0.52
BRD8-201ENST00000230901 SMARCA2P51531 1590 aa11.77□□□□□ -0.52
BRD8-201ENST00000230901 PEG3Q9GZU2 1588 aa11.76□□□□□ -0.53
BRD8-201ENST00000230901 CLSPNQ9HAW4 1339 aa11.74□□□□□ -0.53
BRD8-201ENST00000230901 ABCC8Q09428 1581 aa11.73□□□□□ -0.53
BRD8-201ENST00000230901 SUPT16HQ9Y5B9 1047 aaKnown RBP11.7□□□□□ -0.54
BRD8-201ENST00000230901 TTBK1Q5TCY1 1321 aaPredicted RBP11.7□□□□□ -0.54
BRD8-201ENST00000230901 ATAD2BQ9ULI0 1458 aa11.69□□□□□ -0.54
BRD8-201ENST00000230901 SOGA1O94964 1423 aa11.69□□□□□ -0.54
BRD8-201ENST00000230901 EEA1Q15075 1411 aa11.67□□□□□ -0.54
BRD8-201ENST00000230901 TSHZ2Q9NRE2 1034 aa11.67□□□□□ -0.54
BRD8-201ENST00000230901 ANP32EQ9BTT0 268 aa11.67□□□□□ -0.54
BRD8-201ENST00000230901 BAZ1BQ9UIG0 1483 aaKnown RBP11.66□□□□□ -0.54
BRD8-201ENST00000230901 RUSC2Q8N2Y8 1516 aa11.64□□□□□ -0.55
BRD8-201ENST00000230901 GOLGA3Q08378 1498 aa11.62□□□□□ -0.55
BRD8-201ENST00000230901 BCL11AQ9H165 835 aa11.61□□□□□ -0.55
BRD8-201ENST00000230901 CSRNP3Q8WYN3 585 aa11.58□□□□□ -0.56
BRD8-201ENST00000230901 KIF21BO75037 1637 aa11.58□□□□□ -0.56
BRD8-201ENST00000230901 NCAPD3P42695 1498 aa11.54□□□□□ -0.56
BRD8-201ENST00000230901 HNRNPUL2Q1KMD3 747 aaKnown RBP11.53□□□□□ -0.56
BRD8-201ENST00000230901 VPS8Q8N3P4 1428 aa11.53□□□□□ -0.56
BRD8-201ENST00000230901 HMGXB3Q12766 1538 aa11.53□□□□□ -0.56
BRD8-201ENST00000230901 CLIP1P30622 1438 aa11.53□□□□□ -0.56
BRD8-201ENST00000230901 DHX57Q6P158 1386 aaKnown RBP11.52□□□□□ -0.56
BRD8-201ENST00000230901 CEP164Q9UPV0 1460 aa11.5□□□□□ -0.57
BRD8-201ENST00000230901 UBTFP17480 764 aaKnown RBP11.49□□□□□ -0.57
BRD8-201ENST00000230901 CUX2O14529 1486 aa11.45□□□□□ -0.58
BRD8-201ENST00000230901 SYNJ1O43426 1573 aa11.45□□□□□ -0.58
BRD8-201ENST00000230901 RAPGEF2Q9Y4G8 1499 aa11.39□□□□□ -0.59
BRD8-201ENST00000230901 KCNH8Q96L42 1107 aa11.38□□□□□ -0.59
BRD8-201ENST00000230901 RRBP1Q9P2E9 1410 aaKnown RBP11.38□□□□□ -0.59
BRD8-201ENST00000230901 TOP2BQ02880 1626 aa11.38□□□□□ -0.59
BRD8-201ENST00000230901 CFTRP13569 1480 aa11.36□□□□□ -0.59
BRD8-201ENST00000230901 RBM19Q9Y4C8 960 aaKnown RBP11.36□□□□□ -0.59
BRD8-201ENST00000230901 BIVM-ERCC5R4GMW8 1640 aa11.35□□□□□ -0.59
BRD8-201ENST00000230901 ARAP1Q96P48 1450 aa11.34□□□□□ -0.59
BRD8-201ENST00000230901 MAPKBP1O60336 1514 aa11.33□□□□□ -0.59
BRD8-201ENST00000230901 CC2D2AQ9P2K1 1620 aa11.33□□□□□ -0.6
BRD8-201ENST00000230901 MSH5O43196 834 aa11.32□□□□□ -0.6
BRD8-201ENST00000230901 FKBP8Q14318 412 aa11.3□□□□□ -0.6
BRD8-201ENST00000230901 ERICH3Q5RHP9 1530 aa11.29□□□□□ -0.6
BRD8-201ENST00000230901 PRDM2Q13029 1718 aa11.29□□□□□ -0.6
BRD8-201ENST00000230901 CADPSQ9ULU8 1353 aa11.29□□□□□ -0.6
BRD8-201ENST00000230901 CUX1P39880 1505 aa11.28□□□□□ -0.6
BRD8-201ENST00000230901 BCANQ96GW7 911 aa11.28□□□□□ -0.6
BRD8-201ENST00000230901 APLP2Q06481 763 aa11.27□□□□□ -0.6
BRD8-201ENST00000230901 KANK4Q5T7N3 995 aaPredicted RBP11.27□□□□□ -0.61
BRD8-201ENST00000230901 PRXQ9BXM0 1461 aa11.26□□□□□ -0.61
BRD8-201ENST00000230901 PPP1R15AO75807 674 aaPredicted RBP11.25□□□□□ -0.61
BRD8-201ENST00000230901 WDR97A6NE52 1622 aa11.24□□□□□ -0.61
BRD8-201ENST00000230901 FANCIQ9NVI1 1328 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms