Protein–RNA interactions for Protein: Q5TGY1

TMCO4, Transmembrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO4Q5TGY1 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.02■■□□□ 1.6
TMCO4Q5TGY1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TMCO4Q5TGY1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TMCO4Q5TGY1 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
TMCO4Q5TGY1 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.01■■□□□ 1.59
TMCO4Q5TGY1 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TMCO4Q5TGY1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.01■■□□□ 1.59
TMCO4Q5TGY1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25■■□□□ 1.59
TMCO4Q5TGY1 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25■■□□□ 1.59
TMCO4Q5TGY1 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25■■□□□ 1.59
TMCO4Q5TGY1 RNF126P1-201ENST00000567452 1320 ntBASIC25■■□□□ 1.59
TMCO4Q5TGY1 REST-210ENST00000638187 1334 ntTSL 5 BASIC25■■□□□ 1.59
TMCO4Q5TGY1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TMCO4Q5TGY1 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC25■■□□□ 1.59
TMCO4Q5TGY1 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC24.99■■□□□ 1.59
TMCO4Q5TGY1 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
TMCO4Q5TGY1 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
TMCO4Q5TGY1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC24.99■■□□□ 1.59
TMCO4Q5TGY1 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TMCO4Q5TGY1 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
TMCO4Q5TGY1 AC025884.2-201ENST00000553429 711 ntBASIC24.98■■□□□ 1.59
TMCO4Q5TGY1 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TMCO4Q5TGY1 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
TMCO4Q5TGY1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
TMCO4Q5TGY1 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TMCO4Q5TGY1 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
TMCO4Q5TGY1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.96■■□□□ 1.59
TMCO4Q5TGY1 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.96■■□□□ 1.59
TMCO4Q5TGY1 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
TMCO4Q5TGY1 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
TMCO4Q5TGY1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC24.96■■□□□ 1.59
TMCO4Q5TGY1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC24.96■■□□□ 1.59
TMCO4Q5TGY1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC24.96■■□□□ 1.59
TMCO4Q5TGY1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
TMCO4Q5TGY1 SMPD5-203ENST00000639008 1464 ntBASIC24.96■■□□□ 1.59
TMCO4Q5TGY1 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
TMCO4Q5TGY1 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.95■■□□□ 1.58
TMCO4Q5TGY1 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.95■■□□□ 1.58
TMCO4Q5TGY1 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC24.95■■□□□ 1.58
TMCO4Q5TGY1 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
TMCO4Q5TGY1 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
TMCO4Q5TGY1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
TMCO4Q5TGY1 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
TMCO4Q5TGY1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.94■■□□□ 1.58
TMCO4Q5TGY1 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
TMCO4Q5TGY1 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.93■■□□□ 1.58
TMCO4Q5TGY1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC24.93■■□□□ 1.58
TMCO4Q5TGY1 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC24.93■■□□□ 1.58
TMCO4Q5TGY1 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24.93■■□□□ 1.58
TMCO4Q5TGY1 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
TMCO4Q5TGY1 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
TMCO4Q5TGY1 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.92■■□□□ 1.58
TMCO4Q5TGY1 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TMCO4Q5TGY1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC24.92■■□□□ 1.58
TMCO4Q5TGY1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.92■■□□□ 1.58
TMCO4Q5TGY1 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.92■■□□□ 1.58
TMCO4Q5TGY1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC24.92■■□□□ 1.58
TMCO4Q5TGY1 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
TMCO4Q5TGY1 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
TMCO4Q5TGY1 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
TMCO4Q5TGY1 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
TMCO4Q5TGY1 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.92■■□□□ 1.58
TMCO4Q5TGY1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
TMCO4Q5TGY1 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
TMCO4Q5TGY1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.91■■□□□ 1.58
TMCO4Q5TGY1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
TMCO4Q5TGY1 MIR3960-201ENST00000583311 91 ntBASIC24.91■■□□□ 1.58
TMCO4Q5TGY1 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
TMCO4Q5TGY1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
TMCO4Q5TGY1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
TMCO4Q5TGY1 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.9■■□□□ 1.58
TMCO4Q5TGY1 RARRES2P2-201ENST00000394842 485 ntBASIC24.9■■□□□ 1.58
TMCO4Q5TGY1 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.9■■□□□ 1.58
TMCO4Q5TGY1 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
TMCO4Q5TGY1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC24.9■■□□□ 1.58
TMCO4Q5TGY1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
TMCO4Q5TGY1 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
TMCO4Q5TGY1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
TMCO4Q5TGY1 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
TMCO4Q5TGY1 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC24.89■■□□□ 1.57
TMCO4Q5TGY1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC24.89■■□□□ 1.57
TMCO4Q5TGY1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.57
TMCO4Q5TGY1 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
TMCO4Q5TGY1 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
TMCO4Q5TGY1 AC007029.1-201ENST00000604183 313 ntBASIC24.88■■□□□ 1.57
TMCO4Q5TGY1 BRD4-212ENST00000630599 726 ntTSL 2 BASIC24.88■■□□□ 1.57
TMCO4Q5TGY1 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
TMCO4Q5TGY1 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
TMCO4Q5TGY1 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
TMCO4Q5TGY1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC24.87■■□□□ 1.57
TMCO4Q5TGY1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24.87■■□□□ 1.57
TMCO4Q5TGY1 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
TMCO4Q5TGY1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
TMCO4Q5TGY1 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
TMCO4Q5TGY1 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC24.86■■□□□ 1.57
TMCO4Q5TGY1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.86■■□□□ 1.57
TMCO4Q5TGY1 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
TMCO4Q5TGY1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
TMCO4Q5TGY1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC24.86■■□□□ 1.57
TMCO4Q5TGY1 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms