Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TGFAP01135 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
TGFAP01135 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.16■□□□□ 0.82
TGFAP01135 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
TGFAP01135 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TGFAP01135 AC103724.3-201ENST00000564481 992 ntBASIC20.16■□□□□ 0.82
TGFAP01135 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TGFAP01135 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.16■□□□□ 0.82
TGFAP01135 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TGFAP01135 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TGFAP01135 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TGFAP01135 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
TGFAP01135 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TGFAP01135 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TGFAP01135 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TGFAP01135 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.15■□□□□ 0.82
TGFAP01135 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TGFAP01135 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TGFAP01135 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TGFAP01135 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
TGFAP01135 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TGFAP01135 GUSBP5-201ENST00000418136 578 ntBASIC20.14■□□□□ 0.81
TGFAP01135 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
TGFAP01135 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.14■□□□□ 0.81
TGFAP01135 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TGFAP01135 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TGFAP01135 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TGFAP01135 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TGFAP01135 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.13■□□□□ 0.81
TGFAP01135 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.13■□□□□ 0.81
TGFAP01135 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TGFAP01135 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.13■□□□□ 0.81
TGFAP01135 THA1P-201ENST00000590384 1145 ntBASIC20.13■□□□□ 0.81
TGFAP01135 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TGFAP01135 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TGFAP01135 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TGFAP01135 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TGFAP01135 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TGFAP01135 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TGFAP01135 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.11■□□□□ 0.81
TGFAP01135 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TGFAP01135 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TGFAP01135 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TGFAP01135 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TGFAP01135 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TGFAP01135 AC087393.1-201ENST00000582896 145 ntBASIC20.1■□□□□ 0.81
TGFAP01135 AC019171.1-201ENST00000601251 1056 ntBASIC20.1■□□□□ 0.81
TGFAP01135 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
TGFAP01135 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
TGFAP01135 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
TGFAP01135 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TGFAP01135 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TGFAP01135 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TGFAP01135 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TGFAP01135 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.09■□□□□ 0.81
TGFAP01135 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TGFAP01135 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TGFAP01135 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.08■□□□□ 0.81
TGFAP01135 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
TGFAP01135 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TGFAP01135 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.08■□□□□ 0.81
TGFAP01135 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
TGFAP01135 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.08■□□□□ 0.81
TGFAP01135 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.08■□□□□ 0.81
TGFAP01135 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TGFAP01135 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.08■□□□□ 0.8
TGFAP01135 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.07■□□□□ 0.8
TGFAP01135 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TGFAP01135 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.07■□□□□ 0.8
TGFAP01135 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TGFAP01135 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
TGFAP01135 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TGFAP01135 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TGFAP01135 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TGFAP01135 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.06■□□□□ 0.8
TGFAP01135 AC239859.2-201ENST00000444165 318 ntBASIC20.06■□□□□ 0.8
TGFAP01135 RPS2P7-201ENST00000447334 885 ntBASIC20.06■□□□□ 0.8
TGFAP01135 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
TGFAP01135 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TGFAP01135 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TGFAP01135 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.05■□□□□ 0.8
TGFAP01135 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TGFAP01135 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TGFAP01135 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TGFAP01135 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.05■□□□□ 0.8
TGFAP01135 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TGFAP01135 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC20.04■□□□□ 0.8
TGFAP01135 AL356441.2-201ENST00000443009 864 ntBASIC20.04■□□□□ 0.8
TGFAP01135 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.04■□□□□ 0.8
TGFAP01135 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.04■□□□□ 0.8
TGFAP01135 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TGFAP01135 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TGFAP01135 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.03■□□□□ 0.8
TGFAP01135 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.03■□□□□ 0.8
TGFAP01135 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.03■□□□□ 0.8
TGFAP01135 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.03■□□□□ 0.8
TGFAP01135 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.03■□□□□ 0.8
TGFAP01135 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TGFAP01135 LONRF2P2-201ENST00000439212 571 ntBASIC20.02■□□□□ 0.8
TGFAP01135 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms