Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PRAMEF11O60813 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC24.88■■□□□ 1.57
PRAMEF11O60813 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PRAMEF11O60813 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
PRAMEF11O60813 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PRAMEF11O60813 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.87■■□□□ 1.57
PRAMEF11O60813 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PRAMEF11O60813 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.87■■□□□ 1.57
PRAMEF11O60813 AC093536.1-201ENST00000569153 554 ntBASIC24.87■■□□□ 1.57
PRAMEF11O60813 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.87■■□□□ 1.57
PRAMEF11O60813 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PRAMEF11O60813 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PRAMEF11O60813 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PRAMEF11O60813 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.86■■□□□ 1.57
PRAMEF11O60813 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PRAMEF11O60813 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
PRAMEF11O60813 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC24.84■■□□□ 1.57
PRAMEF11O60813 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PRAMEF11O60813 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PRAMEF11O60813 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.84■■□□□ 1.57
PRAMEF11O60813 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
PRAMEF11O60813 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.84■■□□□ 1.57
PRAMEF11O60813 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.84■■□□□ 1.57
PRAMEF11O60813 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.84■■□□□ 1.57
PRAMEF11O60813 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PRAMEF11O60813 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PRAMEF11O60813 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.84■■□□□ 1.57
PRAMEF11O60813 ABHD17AP5-201ENST00000580133 923 ntBASIC24.83■■□□□ 1.57
PRAMEF11O60813 AC026202.3-201ENST00000600805 1127 ntBASIC24.83■■□□□ 1.57
PRAMEF11O60813 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PRAMEF11O60813 HYI-213ENST00000583037 1322 ntTSL 5 BASIC24.83■■□□□ 1.56
PRAMEF11O60813 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.82■■□□□ 1.56
PRAMEF11O60813 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
PRAMEF11O60813 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
PRAMEF11O60813 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PRAMEF11O60813 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PRAMEF11O60813 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
PRAMEF11O60813 RAP2CP1-202ENST00000605179 643 ntBASIC24.81■■□□□ 1.56
PRAMEF11O60813 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PRAMEF11O60813 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PRAMEF11O60813 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PRAMEF11O60813 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PRAMEF11O60813 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PRAMEF11O60813 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
PRAMEF11O60813 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC24.8■■□□□ 1.56
PRAMEF11O60813 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PRAMEF11O60813 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC24.8■■□□□ 1.56
PRAMEF11O60813 AC009831.1-201ENST00000580420 1582 ntBASIC24.8■■□□□ 1.56
PRAMEF11O60813 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PRAMEF11O60813 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.79■■□□□ 1.56
PRAMEF11O60813 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC24.79■■□□□ 1.56
PRAMEF11O60813 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PRAMEF11O60813 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC24.79■■□□□ 1.56
PRAMEF11O60813 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
PRAMEF11O60813 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PRAMEF11O60813 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.78■■□□□ 1.56
PRAMEF11O60813 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
PRAMEF11O60813 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
PRAMEF11O60813 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PRAMEF11O60813 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PRAMEF11O60813 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PRAMEF11O60813 AC133552.2-201ENST00000619106 1032 ntBASIC24.77■■□□□ 1.56
PRAMEF11O60813 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PRAMEF11O60813 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC24.77■■□□□ 1.56
PRAMEF11O60813 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PRAMEF11O60813 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PRAMEF11O60813 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PRAMEF11O60813 U85056.1-201ENST00000616429 682 ntBASIC24.76■■□□□ 1.55
PRAMEF11O60813 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PRAMEF11O60813 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.75■■□□□ 1.55
PRAMEF11O60813 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PRAMEF11O60813 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
PRAMEF11O60813 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC24.75■■□□□ 1.55
PRAMEF11O60813 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC24.75■■□□□ 1.55
PRAMEF11O60813 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PRAMEF11O60813 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
PRAMEF11O60813 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.74■■□□□ 1.55
PRAMEF11O60813 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
PRAMEF11O60813 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
PRAMEF11O60813 HES4-204ENST00000484667 667 ntTSL 3 BASIC24.74■■□□□ 1.55
PRAMEF11O60813 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC24.74■■□□□ 1.55
PRAMEF11O60813 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PRAMEF11O60813 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.73■■□□□ 1.55
PRAMEF11O60813 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PRAMEF11O60813 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC24.73■■□□□ 1.55
PRAMEF11O60813 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
PRAMEF11O60813 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PRAMEF11O60813 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
PRAMEF11O60813 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PRAMEF11O60813 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PRAMEF11O60813 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PRAMEF11O60813 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PRAMEF11O60813 NTF6A-201ENST00000591175 560 ntBASIC24.71■■□□□ 1.55
PRAMEF11O60813 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PRAMEF11O60813 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PRAMEF11O60813 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC24.7■■□□□ 1.54
PRAMEF11O60813 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PRAMEF11O60813 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
PRAMEF11O60813 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
PRAMEF11O60813 AL592293.1-201ENST00000502889 1188 ntBASIC24.69■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms