Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CTNND1O60716 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
CTNND1O60716 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC28.82■■■□□ 2.2
CTNND1O60716 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC28.81■■■□□ 2.2
CTNND1O60716 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CTNND1O60716 HES6-204ENST00000409182 863 ntTSL 2 BASIC28.81■■■□□ 2.2
CTNND1O60716 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC28.81■■■□□ 2.2
CTNND1O60716 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC28.8■■■□□ 2.2
CTNND1O60716 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
CTNND1O60716 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC28.8■■■□□ 2.2
CTNND1O60716 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CTNND1O60716 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
CTNND1O60716 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
CTNND1O60716 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
CTNND1O60716 AC103724.3-201ENST00000564481 992 ntBASIC28.79■■■□□ 2.2
CTNND1O60716 AC087393.1-201ENST00000582896 145 ntBASIC28.79■■■□□ 2.2
CTNND1O60716 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
CTNND1O60716 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CTNND1O60716 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CTNND1O60716 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC28.77■■■□□ 2.2
CTNND1O60716 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC28.77■■■□□ 2.2
CTNND1O60716 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC28.77■■■□□ 2.2
CTNND1O60716 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
CTNND1O60716 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC28.76■■■□□ 2.19
CTNND1O60716 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC28.75■■■□□ 2.19
CTNND1O60716 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CTNND1O60716 OR2A1-AS1-204ENST00000470435 602 ntBASIC28.74■■■□□ 2.19
CTNND1O60716 PRTG-204ENST00000561292 833 ntTSL 3 BASIC28.74■■■□□ 2.19
CTNND1O60716 AL031848.2-201ENST00000607670 837 ntBASIC28.74■■■□□ 2.19
CTNND1O60716 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CTNND1O60716 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC28.73■■■□□ 2.19
CTNND1O60716 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC28.73■■■□□ 2.19
CTNND1O60716 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CTNND1O60716 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC28.73■■■□□ 2.19
CTNND1O60716 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
CTNND1O60716 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CTNND1O60716 GUSBP5-201ENST00000418136 578 ntBASIC28.72■■■□□ 2.19
CTNND1O60716 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CTNND1O60716 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC28.72■■■□□ 2.19
CTNND1O60716 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC28.72■■■□□ 2.19
CTNND1O60716 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
CTNND1O60716 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
CTNND1O60716 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CTNND1O60716 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC28.71■■■□□ 2.19
CTNND1O60716 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
CTNND1O60716 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC28.71■■■□□ 2.19
CTNND1O60716 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
CTNND1O60716 RPS2P7-201ENST00000447334 885 ntBASIC28.71■■■□□ 2.19
CTNND1O60716 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
CTNND1O60716 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC28.7■■■□□ 2.19
CTNND1O60716 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
CTNND1O60716 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.19
CTNND1O60716 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC28.7■■■□□ 2.18
CTNND1O60716 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
CTNND1O60716 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
CTNND1O60716 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC28.69■■■□□ 2.18
CTNND1O60716 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
CTNND1O60716 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC28.69■■■□□ 2.18
CTNND1O60716 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
CTNND1O60716 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
CTNND1O60716 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CTNND1O60716 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CTNND1O60716 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC28.68■■■□□ 2.18
CTNND1O60716 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
CTNND1O60716 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CTNND1O60716 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC28.68■■■□□ 2.18
CTNND1O60716 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC28.68■■■□□ 2.18
CTNND1O60716 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC28.68■■■□□ 2.18
CTNND1O60716 LONRF2P2-201ENST00000439212 571 ntBASIC28.68■■■□□ 2.18
CTNND1O60716 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC28.68■■■□□ 2.18
CTNND1O60716 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CTNND1O60716 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC28.67■■■□□ 2.18
CTNND1O60716 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
CTNND1O60716 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC28.67■■■□□ 2.18
CTNND1O60716 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
CTNND1O60716 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC28.66■■■□□ 2.18
CTNND1O60716 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
CTNND1O60716 AL592295.1-201ENST00000400984 884 ntBASIC28.66■■■□□ 2.18
CTNND1O60716 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC28.66■■■□□ 2.18
CTNND1O60716 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC28.66■■■□□ 2.18
CTNND1O60716 AL449106.1-201ENST00000608517 1980 ntBASIC28.65■■■□□ 2.18
CTNND1O60716 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
CTNND1O60716 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC28.65■■■□□ 2.18
CTNND1O60716 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC28.65■■■□□ 2.18
CTNND1O60716 DRD5P2-201ENST00000421395 2012 ntBASIC28.65■■■□□ 2.18
CTNND1O60716 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC28.65■■■□□ 2.18
CTNND1O60716 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC28.65■■■□□ 2.18
CTNND1O60716 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
CTNND1O60716 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC28.64■■■□□ 2.18
CTNND1O60716 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.18
CTNND1O60716 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
CTNND1O60716 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
CTNND1O60716 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC28.63■■■□□ 2.17
CTNND1O60716 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
CTNND1O60716 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC28.63■■■□□ 2.17
CTNND1O60716 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC28.62■■■□□ 2.17
CTNND1O60716 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
CTNND1O60716 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC28.61■■■□□ 2.17
CTNND1O60716 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC28.61■■■□□ 2.17
CTNND1O60716 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms