Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DUXBA0A1W2PPF3 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DUXBA0A1W2PPF3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
DUXBA0A1W2PPF3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DUXBA0A1W2PPF3 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DUXBA0A1W2PPF3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.81■□□□□ 0.76
DUXBA0A1W2PPF3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.81■□□□□ 0.76
DUXBA0A1W2PPF3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.81■□□□□ 0.76
DUXBA0A1W2PPF3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DUXBA0A1W2PPF3 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DUXBA0A1W2PPF3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DUXBA0A1W2PPF3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DUXBA0A1W2PPF3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DUXBA0A1W2PPF3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DUXBA0A1W2PPF3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DUXBA0A1W2PPF3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DUXBA0A1W2PPF3 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.79■□□□□ 0.76
DUXBA0A1W2PPF3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DUXBA0A1W2PPF3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DUXBA0A1W2PPF3 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DUXBA0A1W2PPF3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.79■□□□□ 0.76
DUXBA0A1W2PPF3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.79■□□□□ 0.76
DUXBA0A1W2PPF3 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DUXBA0A1W2PPF3 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
DUXBA0A1W2PPF3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.78■□□□□ 0.76
DUXBA0A1W2PPF3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DUXBA0A1W2PPF3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
DUXBA0A1W2PPF3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
DUXBA0A1W2PPF3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DUXBA0A1W2PPF3 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DUXBA0A1W2PPF3 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DUXBA0A1W2PPF3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.78■□□□□ 0.76
DUXBA0A1W2PPF3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.78■□□□□ 0.76
DUXBA0A1W2PPF3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DUXBA0A1W2PPF3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
DUXBA0A1W2PPF3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
DUXBA0A1W2PPF3 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.76
DUXBA0A1W2PPF3 DUX4L28-201ENST00000623687 678 ntBASIC19.77■□□□□ 0.76
DUXBA0A1W2PPF3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
DUXBA0A1W2PPF3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.77■□□□□ 0.76
DUXBA0A1W2PPF3 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.76■□□□□ 0.75
DUXBA0A1W2PPF3 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.76■□□□□ 0.75
DUXBA0A1W2PPF3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.76■□□□□ 0.75
DUXBA0A1W2PPF3 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DUXBA0A1W2PPF3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DUXBA0A1W2PPF3 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
DUXBA0A1W2PPF3 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
DUXBA0A1W2PPF3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DUXBA0A1W2PPF3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
DUXBA0A1W2PPF3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DUXBA0A1W2PPF3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DUXBA0A1W2PPF3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
DUXBA0A1W2PPF3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DUXBA0A1W2PPF3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DUXBA0A1W2PPF3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.73■□□□□ 0.75
DUXBA0A1W2PPF3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
DUXBA0A1W2PPF3 MIR3665-201ENST00000578708 105 ntBASIC19.73■□□□□ 0.75
DUXBA0A1W2PPF3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DUXBA0A1W2PPF3 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DUXBA0A1W2PPF3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DUXBA0A1W2PPF3 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
DUXBA0A1W2PPF3 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
DUXBA0A1W2PPF3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.73■□□□□ 0.75
DUXBA0A1W2PPF3 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
DUXBA0A1W2PPF3 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
DUXBA0A1W2PPF3 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.72■□□□□ 0.75
DUXBA0A1W2PPF3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DUXBA0A1W2PPF3 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DUXBA0A1W2PPF3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DUXBA0A1W2PPF3 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.72■□□□□ 0.75
DUXBA0A1W2PPF3 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DUXBA0A1W2PPF3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DUXBA0A1W2PPF3 AC096887.2-201ENST00000623443 1957 ntBASIC19.72■□□□□ 0.75
DUXBA0A1W2PPF3 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DUXBA0A1W2PPF3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
DUXBA0A1W2PPF3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DUXBA0A1W2PPF3 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.71■□□□□ 0.75
DUXBA0A1W2PPF3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.71■□□□□ 0.75
DUXBA0A1W2PPF3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.71■□□□□ 0.75
DUXBA0A1W2PPF3 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DUXBA0A1W2PPF3 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
DUXBA0A1W2PPF3 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DUXBA0A1W2PPF3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
DUXBA0A1W2PPF3 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.7■□□□□ 0.74
DUXBA0A1W2PPF3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.7■□□□□ 0.74
DUXBA0A1W2PPF3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
DUXBA0A1W2PPF3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.7■□□□□ 0.74
DUXBA0A1W2PPF3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
DUXBA0A1W2PPF3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DUXBA0A1W2PPF3 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DUXBA0A1W2PPF3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.7■□□□□ 0.74
DUXBA0A1W2PPF3 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC19.7■□□□□ 0.74
DUXBA0A1W2PPF3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.7■□□□□ 0.74
DUXBA0A1W2PPF3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
DUXBA0A1W2PPF3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.7■□□□□ 0.74
DUXBA0A1W2PPF3 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.7■□□□□ 0.74
DUXBA0A1W2PPF3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
DUXBA0A1W2PPF3 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.7■□□□□ 0.74
DUXBA0A1W2PPF3 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DUXBA0A1W2PPF3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms