Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.19■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.18■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 SMPD5-203ENST00000639008 1464 ntBASIC22.18■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.17■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.16■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 NTF6A-201ENST00000591175 560 ntBASIC22.16■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.16■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC22.16■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.16■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.15■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC22.15■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.14■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC22.13■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.13■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.13■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.13■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.13■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.13■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 HYI-213ENST00000583037 1322 ntTSL 5 BASIC22.12■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.12■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC22.12■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 MIR3960-201ENST00000583311 91 ntBASIC22.12■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC22.12■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.11■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC22.1■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC22.1■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC22.09■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.09■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 U85056.1-201ENST00000616429 682 ntBASIC22.09■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC22.08■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.08■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
TNFSF12-TNFSF13A0A0A6YY99 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC22.08■■□□□ 1.12
TNFSF12-TNFSF13A0A0A6YY99 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
TNFSF12-TNFSF13A0A0A6YY99 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TNFSF12-TNFSF13A0A0A6YY99 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.07■■□□□ 1.12
TNFSF12-TNFSF13A0A0A6YY99 AC007029.1-201ENST00000604183 313 ntBASIC22.07■■□□□ 1.12
TNFSF12-TNFSF13A0A0A6YY99 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.07■■□□□ 1.12
TNFSF12-TNFSF13A0A0A6YY99 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC22.06■■□□□ 1.12
TNFSF12-TNFSF13A0A0A6YY99 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TNFSF12-TNFSF13A0A0A6YY99 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TNFSF12-TNFSF13A0A0A6YY99 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TNFSF12-TNFSF13A0A0A6YY99 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.05■■□□□ 1.12
TNFSF12-TNFSF13A0A0A6YY99 RP9P-202ENST00000450133 1212 ntBASIC22.05■■□□□ 1.12
TNFSF12-TNFSF13A0A0A6YY99 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.04■■□□□ 1.12
TNFSF12-TNFSF13A0A0A6YY99 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TNFSF12-TNFSF13A0A0A6YY99 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.04■■□□□ 1.12
TNFSF12-TNFSF13A0A0A6YY99 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TNFSF12-TNFSF13A0A0A6YY99 AC012354.3-201ENST00000623734 483 ntBASIC22.04■■□□□ 1.12
TNFSF12-TNFSF13A0A0A6YY99 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.03■■□□□ 1.12
TNFSF12-TNFSF13A0A0A6YY99 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TNFSF12-TNFSF13A0A0A6YY99 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TNFSF12-TNFSF13A0A0A6YY99 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TNFSF12-TNFSF13A0A0A6YY99 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.03■■□□□ 1.12
TNFSF12-TNFSF13A0A0A6YY99 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC22.03■■□□□ 1.12
TNFSF12-TNFSF13A0A0A6YY99 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
TNFSF12-TNFSF13A0A0A6YY99 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms