Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
RCL1Q9Y2P8 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RCL1Q9Y2P8 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RCL1Q9Y2P8 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RCL1Q9Y2P8 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RCL1Q9Y2P8 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC14.37□□□□□ -0.11
RCL1Q9Y2P8 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.37□□□□□ -0.11
RCL1Q9Y2P8 AC073195.1-201ENST00000607241 877 ntBASIC14.37□□□□□ -0.11
RCL1Q9Y2P8 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RCL1Q9Y2P8 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RCL1Q9Y2P8 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
RCL1Q9Y2P8 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RCL1Q9Y2P8 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RCL1Q9Y2P8 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RCL1Q9Y2P8 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RCL1Q9Y2P8 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RCL1Q9Y2P8 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RCL1Q9Y2P8 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RCL1Q9Y2P8 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.37□□□□□ -0.11
RCL1Q9Y2P8 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RCL1Q9Y2P8 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RCL1Q9Y2P8 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RCL1Q9Y2P8 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RCL1Q9Y2P8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RCL1Q9Y2P8 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RCL1Q9Y2P8 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.37□□□□□ -0.11
RCL1Q9Y2P8 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RCL1Q9Y2P8 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 AC116353.5-201ENST00000638148 1699 ntBASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 RNF121-214ENST00000533380 870 ntTSL 3 BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 AC104390.1-201ENST00000555663 520 ntBASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 SLC25A1P4-201ENST00000567977 778 ntBASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 AF186192.3-201ENST00000583427 947 ntBASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.36□□□□□ -0.11
RCL1Q9Y2P8 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.35□□□□□ -0.11
RCL1Q9Y2P8 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RCL1Q9Y2P8 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RCL1Q9Y2P8 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RCL1Q9Y2P8 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.35□□□□□ -0.11
RCL1Q9Y2P8 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RCL1Q9Y2P8 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.35□□□□□ -0.11
RCL1Q9Y2P8 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RCL1Q9Y2P8 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RCL1Q9Y2P8 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.35□□□□□ -0.11
RCL1Q9Y2P8 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.35□□□□□ -0.11
RCL1Q9Y2P8 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RCL1Q9Y2P8 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RCL1Q9Y2P8 DDX43P3-201ENST00000441064 443 ntBASIC14.35□□□□□ -0.11
RCL1Q9Y2P8 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC14.35□□□□□ -0.11
RCL1Q9Y2P8 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC14.35□□□□□ -0.11
RCL1Q9Y2P8 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.35□□□□□ -0.11
RCL1Q9Y2P8 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.35□□□□□ -0.11
RCL1Q9Y2P8 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RCL1Q9Y2P8 AC026691.1-201ENST00000602502 2017 ntBASIC14.35□□□□□ -0.11
RCL1Q9Y2P8 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms