RNA–Protein interactions for RNA: ENST00000344300.3

C15orf48-201, Transcript of chromosome 15 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C15orf48, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C15orf48-201ENST00000344300 NISCHQ9Y2I1 1504 aa49.55■■■■■ 5.52
C15orf48-201ENST00000344300 CCDC180Q9P1Z9 1646 aa44.23■■■■■ 4.67
C15orf48-201ENST00000344300 ABCC9O60706 1549 aa43.86■■■■■ 4.61
C15orf48-201ENST00000344300 RB1CC1Q8TDY2 1594 aa41.89■■■■■ 4.3
C15orf48-201ENST00000344300 NACADO15069 1562 aa41.73■■■■■ 4.27
C15orf48-201ENST00000344300 DCAF8L2P0C7V8 631 aa41.61■■■■■ 4.25
C15orf48-201ENST00000344300 MYO15BQ96JP2 1530 aa41.3■■■■■ 4.2
C15orf48-201ENST00000344300 ZCCHC6Q5VYS8 1495 aaKnown RBP41.15■■■■■ 4.18
C15orf48-201ENST00000344300 UNC13AQ9UPW8 1703 aa41■■■■■ 4.15
C15orf48-201ENST00000344300 DCAF1Q9Y4B6 1507 aa40.94■■■■■ 4.14
C15orf48-201ENST00000344300 PABPN1Q86U42 306 aaKnown RBP eCLIP40.93■■■■■ 4.14
C15orf48-201ENST00000344300 DNAJC5BQ9UF47 199 aa40.85■■■■■ 4.13
C15orf48-201ENST00000344300 BICRAQ9NZM4 1560 aa40.74■■■■■ 4.11
C15orf48-201ENST00000344300 SCRIBQ14160 1630 aa40.35■■■■■ 4.05
C15orf48-201ENST00000344300 SHROOM4Q9ULL8 1493 aa40.14■■■■■ 4.02
C15orf48-201ENST00000344300 EIF4G1Q04637 1599 aaKnown RBP39.66■■■■□ 3.94
C15orf48-201ENST00000344300 CC2D2AQ9P2K1 1620 aa39.64■■■■□ 3.94
C15orf48-201ENST00000344300 CECR2Q9BXF3 1484 aa39.45■■■■□ 3.91
C15orf48-201ENST00000344300 NCAPD3P42695 1498 aa38.55■■■■□ 3.76
C15orf48-201ENST00000344300 SMARCA4P51532 1647 aa38.55■■■■□ 3.76
C15orf48-201ENST00000344300 ATAD2BQ9ULI0 1458 aa38.49■■■■□ 3.75
C15orf48-201ENST00000344300 BAZ1AQ9NRL2 1556 aaPredicted RBP38.4■■■■□ 3.74
C15orf48-201ENST00000344300 SMARCA2P51531 1590 aa38.36■■■■□ 3.73
C15orf48-201ENST00000344300 HMGXB3Q12766 1538 aa38.28■■■■□ 3.72
C15orf48-201ENST00000344300 MROH2BQ7Z745 1585 aa38.2■■■■□ 3.71
C15orf48-201ENST00000344300 PEG3Q9GZU2 1588 aa38.18■■■■□ 3.7
C15orf48-201ENST00000344300 BAZ1BQ9UIG0 1483 aaKnown RBP38.11■■■■□ 3.69
C15orf48-201ENST00000344300 NESP48681 1621 aa37.83■■■■□ 3.65
C15orf48-201ENST00000344300 ERCC6Q03468 1493 aa37.78■■■■□ 3.64
C15orf48-201ENST00000344300 WIZO95785 1651 aa37.76■■■■□ 3.63
C15orf48-201ENST00000344300 CUX2O14529 1486 aa37.58■■■■□ 3.61
C15orf48-201ENST00000344300 RSF1Q96T23 1441 aaPredicted RBP37.57■■■■□ 3.6
C15orf48-201ENST00000344300 LAMC3Q9Y6N6 1575 aa37.57■■■■□ 3.6
C15orf48-201ENST00000344300 CADPSQ9ULU8 1353 aa37.39■■■■□ 3.58
C15orf48-201ENST00000344300 PDS5BQ9NTI5 1447 aa37.34■■■■□ 3.57
C15orf48-201ENST00000344300 THOC2Q8NI27 1593 aaKnown RBP37.33■■■■□ 3.57
C15orf48-201ENST00000344300 KIF21AQ7Z4S6 1674 aa37.32■■■■□ 3.57
C15orf48-201ENST00000344300 TOP2AP11388 1531 aaKnown RBP37.28■■■■□ 3.56
C15orf48-201ENST00000344300 DNAJC5Q9H3Z4 198 aa37.14■■■■□ 3.54
C15orf48-201ENST00000344300 CFTRP13569 1480 aa37.06■■■■□ 3.52
C15orf48-201ENST00000344300 MRC2Q9UBG0 1479 aa37.01■■■■□ 3.51
C15orf48-201ENST00000344300 FANCD2Q9BXW9 1451 aa36.95■■■■□ 3.51
C15orf48-201ENST00000344300 CEP164Q9UPV0 1460 aa36.94■■■■□ 3.5
C15orf48-201ENST00000344300 WDR62O43379 1518 aa36.91■■■■□ 3.5
C15orf48-201ENST00000344300 CCDC88BA6NC98 1476 aa36.89■■■■□ 3.5
C15orf48-201ENST00000344300 PRDM2Q13029 1718 aa36.68■■■■□ 3.46
C15orf48-201ENST00000344300 URB2Q14146 1524 aaKnown RBP36.65■■■■□ 3.46
C15orf48-201ENST00000344300 TOPBP1Q92547 1522 aa36.31■■■■□ 3.4
C15orf48-201ENST00000344300 ABCC8Q09428 1581 aa36.22■■■■□ 3.39
C15orf48-201ENST00000344300 SUPT5HO00267 1087 aaKnown RBP36.2■■■■□ 3.39
C15orf48-201ENST00000344300 DNMBPQ6XZF7 1577 aa36.19■■■■□ 3.38
C15orf48-201ENST00000344300 IFT140Q96RY7 1462 aa36.18■■■■□ 3.38
C15orf48-201ENST00000344300 ZNF608Q9ULD9 1512 aaPredicted RBP36.13■■■■□ 3.38
C15orf48-201ENST00000344300 TARBP1Q13395 1621 aaKnown RBP35.97■■■■□ 3.35
C15orf48-201ENST00000344300 OSCARQ8IYS5 282 aa35.97■■■■□ 3.35
C15orf48-201ENST00000344300 POLA1P09884 1462 aaPredicted RBP35.97■■■■□ 3.35
C15orf48-201ENST00000344300 EIF4G3O43432 1585 aaKnown RBP35.92■■■■□ 3.34
C15orf48-201ENST00000344300 CUX1P39880 1505 aa35.87■■■■□ 3.33
C15orf48-201ENST00000344300 AQRO60306 1485 aaKnown RBP eCLIP35.86■■■■□ 3.33
C15orf48-201ENST00000344300 RAD54L2Q9Y4B4 1467 aa35.86■■■■□ 3.33
C15orf48-201ENST00000344300 SOGA1O94964 1423 aa35.81■■■■□ 3.32
C15orf48-201ENST00000344300 FGD5Q6ZNL6 1462 aa35.8■■■■□ 3.32
C15orf48-201ENST00000344300 TDRD9Q8NDG6 1382 aaKnown RBP35.7■■■■□ 3.31
C15orf48-201ENST00000344300 TRIM41Q8WV44 630 aa35.65■■■■□ 3.3
C15orf48-201ENST00000344300 WDR97A6NE52 1622 aa35.57■■■■□ 3.29
C15orf48-201ENST00000344300 CHD1O14646 1710 aa35.57■■■■□ 3.29
C15orf48-201ENST00000344300 FBLN2P98095 1184 aa35.49■■■■□ 3.27
C15orf48-201ENST00000344300 SNAPC4Q5SXM2 1469 aa35.48■■■■□ 3.27
C15orf48-201ENST00000344300 RIMBP3CA6NJZ7 1639 aa35.46■■■■□ 3.27
C15orf48-201ENST00000344300 RIMBP3BA6NNM3 1639 aa35.46■■■■□ 3.27
C15orf48-201ENST00000344300 RIMBP3Q9UFD9 1639 aa35.46■■■■□ 3.27
C15orf48-201ENST00000344300 GRIN2BQ13224 1484 aa35.43■■■■□ 3.26
C15orf48-201ENST00000344300 ABCA10Q8WWZ4 1543 aa35.42■■■■□ 3.26
C15orf48-201ENST00000344300 WRNQ14191 1432 aaPredicted RBP eCLIP35.4■■■■□ 3.26
C15orf48-201ENST00000344300 ARHGEF11O15085 1522 aa35.39■■■■□ 3.26
C15orf48-201ENST00000344300 GAPVD1Q14C86 1478 aa35.38■■■■□ 3.25
C15orf48-201ENST00000344300 MAGI1Q96QZ7 1491 aaPredicted RBP35.38■■■■□ 3.25
C15orf48-201ENST00000344300 TOP2BQ02880 1626 aa35.38■■■■□ 3.25
C15orf48-201ENST00000344300 SYNJ1O43426 1573 aa35.38■■■■□ 3.25
C15orf48-201ENST00000344300 BIVM-ERCC5R4GMW8 1640 aa35.37■■■■□ 3.25
C15orf48-201ENST00000344300 ABCA5Q8WWZ7 1642 aa35.32■■■■□ 3.25
C15orf48-201ENST00000344300 PBRM1Q86U86 1689 aa35.32■■■■□ 3.24
C15orf48-201ENST00000344300 CHMP7Q8WUX9 453 aaPredicted RBP35.3■■■■□ 3.24
C15orf48-201ENST00000344300 SYNJ2O15056 1496 aa35.27■■■■□ 3.24
C15orf48-201ENST00000344300 CLASP1Q7Z460 1538 aa35.2■■■■□ 3.23
C15orf48-201ENST00000344300 CYB5RLQ6IPT4 315 aa35.11■■■■□ 3.21
C15orf48-201ENST00000344300 ARAP1Q96P48 1450 aa35.09■■■■□ 3.21
C15orf48-201ENST00000344300 ADAMTS12P58397 1594 aa35.02■■■■□ 3.2
C15orf48-201ENST00000344300 GRIN2AQ12879 1464 aa34.99■■■■□ 3.19
C15orf48-201ENST00000344300 ERICH3Q5RHP9 1530 aa34.97■■■■□ 3.19
C15orf48-201ENST00000344300 FHAD1B1AJZ9 1412 aa34.94■■■■□ 3.18
C15orf48-201ENST00000344300 NUP160Q12769 1436 aa34.88■■■■□ 3.17
C15orf48-201ENST00000344300 CEP170Q5SW79 1584 aa34.86■■■■□ 3.17
C15orf48-201ENST00000344300 ERCC6L2Q5T890 1561 aa34.71■■■■□ 3.15
C15orf48-201ENST00000344300 KIF27Q86VH2 1401 aa34.68■■■■□ 3.14
C15orf48-201ENST00000344300 IGF1RP08069 1367 aa34.67■■■■□ 3.14
C15orf48-201ENST00000344300 SHROOM2Q13796 1616 aa34.66■■■■□ 3.14
C15orf48-201ENST00000344300 TRHP20396 242 aaPredicted RBP34.54■■■■□ 3.12
C15orf48-201ENST00000344300 CUL7Q14999 1698 aa34.52■■■■□ 3.12
C15orf48-201ENST00000344300 JPH4Q96JJ6 628 aa34.52■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms