RNA–Protein interactions for RNA: ENST00000441064.1

DDX43P3-201, Transcript of DEAD-box helicase 43 pseudogene 3, humanhuman

BASIC

Gene DDX43P3, Length 443 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43P3-201ENST00000441064 NISCHQ9Y2I1 1504 aa41.06■■■■■ 4.16
DDX43P3-201ENST00000441064 CCDC180Q9P1Z9 1646 aa36.24■■■■□ 3.39
DDX43P3-201ENST00000441064 ABCC9O60706 1549 aa35.54■■■■□ 3.28
DDX43P3-201ENST00000441064 ZCCHC6Q5VYS8 1495 aaKnown RBP34.46■■■■□ 3.11
DDX43P3-201ENST00000441064 RB1CC1Q8TDY2 1594 aa34.28■■■■□ 3.08
DDX43P3-201ENST00000441064 NACADO15069 1562 aa34.23■■■■□ 3.07
DDX43P3-201ENST00000441064 DCAF1Q9Y4B6 1507 aa34.11■■■■□ 3.05
DDX43P3-201ENST00000441064 MYO15BQ96JP2 1530 aa34.08■■■■□ 3.05
DDX43P3-201ENST00000441064 DCAF8L2P0C7V8 631 aa33.95■■■■□ 3.03
DDX43P3-201ENST00000441064 PABPN1Q86U42 306 aaKnown RBP eCLIP33.15■■■□□ 2.9
DDX43P3-201ENST00000441064 SHROOM4Q9ULL8 1493 aa33.13■■■□□ 2.89
DDX43P3-201ENST00000441064 UNC13AQ9UPW8 1703 aa33.09■■■□□ 2.89
DDX43P3-201ENST00000441064 BICRAQ9NZM4 1560 aa33.04■■■□□ 2.88
DDX43P3-201ENST00000441064 SCRIBQ14160 1630 aa32.93■■■□□ 2.86
DDX43P3-201ENST00000441064 DNAJC5BQ9UF47 199 aa32.78■■■□□ 2.84
DDX43P3-201ENST00000441064 EIF4G1Q04637 1599 aaKnown RBP32.29■■■□□ 2.76
DDX43P3-201ENST00000441064 CC2D2AQ9P2K1 1620 aa32.16■■■□□ 2.74
DDX43P3-201ENST00000441064 CECR2Q9BXF3 1484 aa32.1■■■□□ 2.73
DDX43P3-201ENST00000441064 BAZ1AQ9NRL2 1556 aaPredicted RBP31.8■■■□□ 2.68
DDX43P3-201ENST00000441064 SMARCA4P51532 1647 aa31.66■■■□□ 2.66
DDX43P3-201ENST00000441064 RSF1Q96T23 1441 aaPredicted RBP31.66■■■□□ 2.66
DDX43P3-201ENST00000441064 MROH2BQ7Z745 1585 aa31.62■■■□□ 2.65
DDX43P3-201ENST00000441064 SUPT5HO00267 1087 aaKnown RBP31.6■■■□□ 2.65
DDX43P3-201ENST00000441064 NCAPD3P42695 1498 aa31.59■■■□□ 2.65
DDX43P3-201ENST00000441064 SMARCA2P51531 1590 aa31.51■■■□□ 2.64
DDX43P3-201ENST00000441064 ATAD2BQ9ULI0 1458 aa31.46■■■□□ 2.63
DDX43P3-201ENST00000441064 HMGXB3Q12766 1538 aa31.38■■■□□ 2.61
DDX43P3-201ENST00000441064 WIZO95785 1651 aa31.36■■■□□ 2.61
DDX43P3-201ENST00000441064 PEG3Q9GZU2 1588 aa31.36■■■□□ 2.61
DDX43P3-201ENST00000441064 BAZ1BQ9UIG0 1483 aaKnown RBP31.21■■■□□ 2.59
DDX43P3-201ENST00000441064 TOP2AP11388 1531 aaKnown RBP31.14■■■□□ 2.58
DDX43P3-201ENST00000441064 ERCC6Q03468 1493 aa30.82■■■□□ 2.52
DDX43P3-201ENST00000441064 LAMC3Q9Y6N6 1575 aa30.76■■■□□ 2.52
DDX43P3-201ENST00000441064 CCDC88BA6NC98 1476 aa30.7■■■□□ 2.51
DDX43P3-201ENST00000441064 CUX2O14529 1486 aa30.7■■■□□ 2.51
DDX43P3-201ENST00000441064 PDS5BQ9NTI5 1447 aa30.67■■■□□ 2.5
DDX43P3-201ENST00000441064 CADPSQ9ULU8 1353 aa30.65■■■□□ 2.5
DDX43P3-201ENST00000441064 NESP48681 1621 aa30.6■■■□□ 2.49
DDX43P3-201ENST00000441064 CFTRP13569 1480 aa30.38■■■□□ 2.45
DDX43P3-201ENST00000441064 THOC2Q8NI27 1593 aaKnown RBP30.27■■■□□ 2.44
DDX43P3-201ENST00000441064 MRC2Q9UBG0 1479 aa30.24■■■□□ 2.43
DDX43P3-201ENST00000441064 CEP164Q9UPV0 1460 aa30.23■■■□□ 2.43
DDX43P3-201ENST00000441064 PRDM2Q13029 1718 aa30.22■■■□□ 2.43
DDX43P3-201ENST00000441064 FANCD2Q9BXW9 1451 aa30.2■■■□□ 2.43
DDX43P3-201ENST00000441064 KIF21AQ7Z4S6 1674 aa30.18■■■□□ 2.42
DDX43P3-201ENST00000441064 CHIC1Q5VXU3 224 aa30.18■■■□□ 2.42
DDX43P3-201ENST00000441064 WDR62O43379 1518 aa30.12■■■□□ 2.41
DDX43P3-201ENST00000441064 DNAJC5Q9H3Z4 198 aa30.02■■■□□ 2.4
DDX43P3-201ENST00000441064 ABCC8Q09428 1581 aa29.9■■■□□ 2.38
DDX43P3-201ENST00000441064 TRIM41Q8WV44 630 aa29.85■■■□□ 2.37
DDX43P3-201ENST00000441064 WRNQ14191 1432 aaPredicted RBP eCLIP29.85■■■□□ 2.37
DDX43P3-201ENST00000441064 URB2Q14146 1524 aaKnown RBP29.81■■■□□ 2.36
DDX43P3-201ENST00000441064 BIVM-ERCC5R4GMW8 1640 aa29.74■■■□□ 2.35
DDX43P3-201ENST00000441064 TOP2BQ02880 1626 aa29.72■■■□□ 2.35
DDX43P3-201ENST00000441064 SYNJ1O43426 1573 aa29.71■■■□□ 2.35
DDX43P3-201ENST00000441064 IFT140Q96RY7 1462 aa29.67■■■□□ 2.34
DDX43P3-201ENST00000441064 TOPBP1Q92547 1522 aa29.65■■■□□ 2.34
DDX43P3-201ENST00000441064 DNMBPQ6XZF7 1577 aa29.63■■■□□ 2.33
DDX43P3-201ENST00000441064 CUX1P39880 1505 aa29.62■■■□□ 2.33
DDX43P3-201ENST00000441064 EEA1Q15075 1411 aa29.41■■■□□ 2.3
DDX43P3-201ENST00000441064 OSCARQ8IYS5 282 aa29.4■■■□□ 2.3
DDX43P3-201ENST00000441064 POLA1P09884 1462 aaPredicted RBP29.38■■■□□ 2.29
DDX43P3-201ENST00000441064 FGD5Q6ZNL6 1462 aa29.35■■■□□ 2.29
DDX43P3-201ENST00000441064 SOGA1O94964 1423 aa29.34■■■□□ 2.29
DDX43P3-201ENST00000441064 WDR97A6NE52 1622 aa29.33■■■□□ 2.29
DDX43P3-201ENST00000441064 ZNF608Q9ULD9 1512 aaPredicted RBP29.31■■■□□ 2.28
DDX43P3-201ENST00000441064 TARBP1Q13395 1621 aaKnown RBP29.28■■■□□ 2.28
DDX43P3-201ENST00000441064 EIF4G3O43432 1585 aaKnown RBP29.22■■■□□ 2.27
DDX43P3-201ENST00000441064 AQRO60306 1485 aaKnown RBP eCLIP29.17■■■□□ 2.26
DDX43P3-201ENST00000441064 KIF27Q86VH2 1401 aa29.16■■■□□ 2.26
DDX43P3-201ENST00000441064 ABCA10Q8WWZ4 1543 aa29.15■■■□□ 2.26
DDX43P3-201ENST00000441064 RAD54L2Q9Y4B4 1467 aa29.15■■■□□ 2.26
DDX43P3-201ENST00000441064 RUSC2Q8N2Y8 1516 aa29.12■■■□□ 2.25
DDX43P3-201ENST00000441064 FAM9AQ8IZU1 332 aaPredicted RBP29.12■■■□□ 2.25
DDX43P3-201ENST00000441064 TDRD9Q8NDG6 1382 aaKnown RBP29.1■■■□□ 2.25
DDX43P3-201ENST00000441064 CSRNP3Q8WYN3 585 aa29.08■■■□□ 2.25
DDX43P3-201ENST00000441064 GRIN2BQ13224 1484 aa29.06■■■□□ 2.24
DDX43P3-201ENST00000441064 MAGI1Q96QZ7 1491 aaPredicted RBP29.04■■■□□ 2.24
DDX43P3-201ENST00000441064 KIF21BO75037 1637 aa29.01■■■□□ 2.23
DDX43P3-201ENST00000441064 GAPVD1Q14C86 1478 aa28.97■■■□□ 2.23
DDX43P3-201ENST00000441064 ABCA5Q8WWZ7 1642 aa28.96■■■□□ 2.23
DDX43P3-201ENST00000441064 FBLN2P98095 1184 aa28.94■■■□□ 2.22
DDX43P3-201ENST00000441064 CHMP7Q8WUX9 453 aaPredicted RBP28.94■■■□□ 2.22
DDX43P3-201ENST00000441064 SNAPC4Q5SXM2 1469 aa28.91■■■□□ 2.22
DDX43P3-201ENST00000441064 SYNJ2O15056 1496 aa28.9■■■□□ 2.22
DDX43P3-201ENST00000441064 GOLGA3Q08378 1498 aa28.9■■■□□ 2.22
DDX43P3-201ENST00000441064 ERICH3Q5RHP9 1530 aa28.89■■■□□ 2.21
DDX43P3-201ENST00000441064 PRXQ9BXM0 1461 aa28.87■■■□□ 2.21
DDX43P3-201ENST00000441064 LOC105371045A0A1W2PR82 267 aa28.86■■■□□ 2.21
DDX43P3-201ENST00000441064 CUL7Q14999 1698 aa28.85■■■□□ 2.21
DDX43P3-201ENST00000441064 IGF1RP08069 1367 aa28.84■■■□□ 2.21
DDX43P3-201ENST00000441064 PBRM1Q86U86 1689 aa28.8■■■□□ 2.2
DDX43P3-201ENST00000441064 CHD1O14646 1710 aa28.78■■■□□ 2.2
DDX43P3-201ENST00000441064 ARHGEF11O15085 1522 aa28.73■■■□□ 2.19
DDX43P3-201ENST00000441064 CARMIL1Q5VZK9 1371 aa28.72■■■□□ 2.19
DDX43P3-201ENST00000441064 TNIKQ9UKE5 1360 aa28.72■■■□□ 2.19
DDX43P3-201ENST00000441064 RAPGEF2Q9Y4G8 1499 aa28.72■■■□□ 2.19
DDX43P3-201ENST00000441064 FHAD1B1AJZ9 1412 aa28.7■■■□□ 2.19
DDX43P3-201ENST00000441064 RIMBP3CA6NJZ7 1639 aa28.66■■■□□ 2.18
DDX43P3-201ENST00000441064 RIMBP3BA6NNM3 1639 aa28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms