Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB5CP51148 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB5CP51148 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5CP51148 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5CP51148 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
RAB5CP51148 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5CP51148 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5CP51148 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5CP51148 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB5CP51148 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5CP51148 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5CP51148 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5CP51148 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB5CP51148 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5CP51148 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB5CP51148 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
RAB5CP51148 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5CP51148 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5CP51148 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5CP51148 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5CP51148 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
RAB5CP51148 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5CP51148 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5CP51148 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
RAB5CP51148 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5CP51148 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5CP51148 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.13□□□□□ -0.15
RAB5CP51148 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.13□□□□□ -0.15
RAB5CP51148 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5CP51148 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5CP51148 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5CP51148 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC14.13□□□□□ -0.15
RAB5CP51148 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5CP51148 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5CP51148 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.13□□□□□ -0.15
RAB5CP51148 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC14.13□□□□□ -0.15
RAB5CP51148 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC14.13□□□□□ -0.15
RAB5CP51148 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5CP51148 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5CP51148 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5CP51148 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RAB5CP51148 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5CP51148 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5CP51148 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5CP51148 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
RAB5CP51148 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5CP51148 PTPA-216ENST00000432651 857 ntTSL 2 BASIC14.13□□□□□ -0.15
RAB5CP51148 ELP6-205ENST00000439305 880 ntTSL 2 BASIC14.13□□□□□ -0.15
RAB5CP51148 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5CP51148 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5CP51148 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC14.13□□□□□ -0.15
RAB5CP51148 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC14.13□□□□□ -0.15
RAB5CP51148 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
RAB5CP51148 NTF6G-201ENST00000591094 616 ntBASIC14.13□□□□□ -0.15
RAB5CP51148 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC14.13□□□□□ -0.15
RAB5CP51148 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5CP51148 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5CP51148 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5CP51148 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
RAB5CP51148 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.13□□□□□ -0.15
RAB5CP51148 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5CP51148 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
RAB5CP51148 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5CP51148 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
RAB5CP51148 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5CP51148 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
RAB5CP51148 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5CP51148 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC14.13□□□□□ -0.15
RAB5CP51148 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5CP51148 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5CP51148 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5CP51148 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RAB5CP51148 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5CP51148 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
RAB5CP51148 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5CP51148 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5CP51148 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB5CP51148 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB5CP51148 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.12□□□□□ -0.15
RAB5CP51148 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.12□□□□□ -0.15
RAB5CP51148 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB5CP51148 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.12□□□□□ -0.15
RAB5CP51148 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB5CP51148 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB5CP51148 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB5CP51148 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB5CP51148 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RAB5CP51148 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RAB5CP51148 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.12□□□□□ -0.15
RAB5CP51148 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB5CP51148 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC14.12□□□□□ -0.15
RAB5CP51148 ASL-204ENST00000395331 1538 ntTSL 5 BASIC14.12□□□□□ -0.15
RAB5CP51148 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB5CP51148 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.12□□□□□ -0.15
RAB5CP51148 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB5CP51148 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB5CP51148 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB5CP51148 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB5CP51148 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.12□□□□□ -0.15
RAB5CP51148 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms