Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC12.79□□□□□ -0.36
TRGV1A0A0A0MS02 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV1A0A0A0MS02 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC12.79□□□□□ -0.36
TRGV1A0A0A0MS02 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV1A0A0A0MS02 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV1A0A0A0MS02 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
TRGV1A0A0A0MS02 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV1A0A0A0MS02 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV1A0A0A0MS02 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV1A0A0A0MS02 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC12.79□□□□□ -0.36
TRGV1A0A0A0MS02 KRT8P47-201ENST00000604727 1398 ntBASIC12.79□□□□□ -0.36
TRGV1A0A0A0MS02 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV1A0A0A0MS02 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV1A0A0A0MS02 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV1A0A0A0MS02 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC12.79□□□□□ -0.36
TRGV1A0A0A0MS02 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV1A0A0A0MS02 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV1A0A0A0MS02 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV1A0A0A0MS02 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
TRGV1A0A0A0MS02 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
TRGV1A0A0A0MS02 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC12.78□□□□□ -0.36
TRGV1A0A0A0MS02 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV1A0A0A0MS02 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV1A0A0A0MS02 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC12.78□□□□□ -0.36
TRGV1A0A0A0MS02 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC12.78□□□□□ -0.36
TRGV1A0A0A0MS02 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV1A0A0A0MS02 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV1A0A0A0MS02 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC12.78□□□□□ -0.36
TRGV1A0A0A0MS02 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV1A0A0A0MS02 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC12.78□□□□□ -0.36
TRGV1A0A0A0MS02 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV1A0A0A0MS02 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV1A0A0A0MS02 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
TRGV1A0A0A0MS02 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV1A0A0A0MS02 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC12.78□□□□□ -0.36
TRGV1A0A0A0MS02 MTCL1P1-201ENST00000446207 792 ntBASIC12.78□□□□□ -0.36
TRGV1A0A0A0MS02 GUSBP12-201ENST00000513727 720 ntBASIC12.78□□□□□ -0.36
TRGV1A0A0A0MS02 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC12.78□□□□□ -0.36
TRGV1A0A0A0MS02 WDR6-223ENST00000627177 207 ntTSL 2 BASIC12.78□□□□□ -0.36
TRGV1A0A0A0MS02 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV1A0A0A0MS02 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV1A0A0A0MS02 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
TRGV1A0A0A0MS02 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV1A0A0A0MS02 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
TRGV1A0A0A0MS02 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV1A0A0A0MS02 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC12.78□□□□□ -0.36
TRGV1A0A0A0MS02 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV1A0A0A0MS02 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC12.78□□□□□ -0.36
TRGV1A0A0A0MS02 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV1A0A0A0MS02 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
TRGV1A0A0A0MS02 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
TRGV1A0A0A0MS02 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV1A0A0A0MS02 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV1A0A0A0MS02 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV1A0A0A0MS02 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV1A0A0A0MS02 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV1A0A0A0MS02 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV1A0A0A0MS02 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
TRGV1A0A0A0MS02 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
TRGV1A0A0A0MS02 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRGV1A0A0A0MS02 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC12.77□□□□□ -0.36
TRGV1A0A0A0MS02 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.36
TRGV1A0A0A0MS02 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRGV1A0A0A0MS02 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRGV1A0A0A0MS02 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TRGV1A0A0A0MS02 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
TRGV1A0A0A0MS02 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC12.77□□□□□ -0.36
TRGV1A0A0A0MS02 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TRGV1A0A0A0MS02 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC12.77□□□□□ -0.36
TRGV1A0A0A0MS02 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRGV1A0A0A0MS02 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRGV1A0A0A0MS02 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRGV1A0A0A0MS02 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRGV1A0A0A0MS02 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV1A0A0A0MS02 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
TRGV1A0A0A0MS02 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC12.77□□□□□ -0.37
TRGV1A0A0A0MS02 AC007326.2-201ENST00000624224 7579 ntBASIC12.77□□□□□ -0.37
TRGV1A0A0A0MS02 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV1A0A0A0MS02 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV1A0A0A0MS02 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV1A0A0A0MS02 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV1A0A0A0MS02 TSPY22P-201ENST00000427496 604 ntBASIC12.77□□□□□ -0.37
TRGV1A0A0A0MS02 DDX43P3-201ENST00000441064 443 ntBASIC12.77□□□□□ -0.37
TRGV1A0A0A0MS02 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV1A0A0A0MS02 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV1A0A0A0MS02 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV1A0A0A0MS02 CD320-202ENST00000537716 1119 ntTSL 2 BASIC12.77□□□□□ -0.37
TRGV1A0A0A0MS02 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC12.77□□□□□ -0.37
TRGV1A0A0A0MS02 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC12.77□□□□□ -0.37
TRGV1A0A0A0MS02 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV1A0A0A0MS02 NTF6B-201ENST00000591913 560 ntBASIC12.77□□□□□ -0.37
TRGV1A0A0A0MS02 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC12.77□□□□□ -0.37
TRGV1A0A0A0MS02 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV1A0A0A0MS02 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV1A0A0A0MS02 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
TRGV1A0A0A0MS02 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV1A0A0A0MS02 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV1A0A0A0MS02 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV1A0A0A0MS02 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV1A0A0A0MS02 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms