RNA–Protein interactions for RNA: ENST00000536187.6

CACNB3-202, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2 BASIC

Gene CACNB3, Length 1,872 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-202ENST00000536187 NISCHQ9Y2I1 1504 aa42.04■■■■■ 4.32
CACNB3-202ENST00000536187 CCDC180Q9P1Z9 1646 aa36.88■■■■□ 3.49
CACNB3-202ENST00000536187 ABCC9O60706 1549 aa35.48■■■■□ 3.27
CACNB3-202ENST00000536187 ZCCHC6Q5VYS8 1495 aaKnown RBP35.21■■■■□ 3.23
CACNB3-202ENST00000536187 DCAF8L2P0C7V8 631 aa34.87■■■■□ 3.17
CACNB3-202ENST00000536187 DCAF1Q9Y4B6 1507 aa34.68■■■■□ 3.14
CACNB3-202ENST00000536187 NACADO15069 1562 aa34.46■■■■□ 3.11
CACNB3-202ENST00000536187 MYO15BQ96JP2 1530 aa34.46■■■■□ 3.11
CACNB3-202ENST00000536187 RB1CC1Q8TDY2 1594 aa34.31■■■■□ 3.08
CACNB3-202ENST00000536187 SHROOM4Q9ULL8 1493 aa33.96■■■■□ 3.03
CACNB3-202ENST00000536187 SCRIBQ14160 1630 aa33.94■■■■□ 3.02
CACNB3-202ENST00000536187 UNC13AQ9UPW8 1703 aa33.76■■■□□ 2.99
CACNB3-202ENST00000536187 BICRAQ9NZM4 1560 aa33.42■■■□□ 2.94
CACNB3-202ENST00000536187 PABPN1Q86U42 306 aaKnown RBP eCLIP33.35■■■□□ 2.93
CACNB3-202ENST00000536187 CECR2Q9BXF3 1484 aa32.8■■■□□ 2.84
CACNB3-202ENST00000536187 MROH2BQ7Z745 1585 aa32.52■■■□□ 2.8
CACNB3-202ENST00000536187 BAZ1AQ9NRL2 1556 aaPredicted RBP32.46■■■□□ 2.79
CACNB3-202ENST00000536187 SMARCA4P51532 1647 aa32.46■■■□□ 2.79
CACNB3-202ENST00000536187 EIF4G1Q04637 1599 aaKnown RBP32.41■■■□□ 2.78
CACNB3-202ENST00000536187 RSF1Q96T23 1441 aaPredicted RBP32.4■■■□□ 2.78
CACNB3-202ENST00000536187 SUPT5HO00267 1087 aaKnown RBP32.31■■■□□ 2.76
CACNB3-202ENST00000536187 WIZO95785 1651 aa32.24■■■□□ 2.75
CACNB3-202ENST00000536187 CC2D2AQ9P2K1 1620 aa32.09■■■□□ 2.73
CACNB3-202ENST00000536187 ATAD2BQ9ULI0 1458 aa32.05■■■□□ 2.72
CACNB3-202ENST00000536187 PEG3Q9GZU2 1588 aa32.05■■■□□ 2.72
CACNB3-202ENST00000536187 SMARCA2P51531 1590 aa31.94■■■□□ 2.7
CACNB3-202ENST00000536187 DNAJC5BQ9UF47 199 aa31.9■■■□□ 2.7
CACNB3-202ENST00000536187 NCAPD3P42695 1498 aa31.83■■■□□ 2.69
CACNB3-202ENST00000536187 BAZ1BQ9UIG0 1483 aaKnown RBP31.81■■■□□ 2.68
CACNB3-202ENST00000536187 TOP2AP11388 1531 aaKnown RBP31.8■■■□□ 2.68
CACNB3-202ENST00000536187 HMGXB3Q12766 1538 aa31.74■■■□□ 2.67
CACNB3-202ENST00000536187 CCDC88BA6NC98 1476 aa31.49■■■□□ 2.63
CACNB3-202ENST00000536187 NESP48681 1621 aa31.03■■■□□ 2.56
CACNB3-202ENST00000536187 CFTRP13569 1480 aa30.98■■■□□ 2.55
CACNB3-202ENST00000536187 CADPSQ9ULU8 1353 aa30.97■■■□□ 2.55
CACNB3-202ENST00000536187 LAMC3Q9Y6N6 1575 aa30.83■■■□□ 2.53
CACNB3-202ENST00000536187 PRDM2Q13029 1718 aa30.8■■■□□ 2.52
CACNB3-202ENST00000536187 ABCC8Q09428 1581 aa30.72■■■□□ 2.51
CACNB3-202ENST00000536187 FANCD2Q9BXW9 1451 aa30.66■■■□□ 2.5
CACNB3-202ENST00000536187 KIF21AQ7Z4S6 1674 aa30.63■■■□□ 2.49
CACNB3-202ENST00000536187 CHIC1Q5VXU3 224 aa30.62■■■□□ 2.49
CACNB3-202ENST00000536187 PDS5BQ9NTI5 1447 aa30.56■■■□□ 2.48
CACNB3-202ENST00000536187 CEP164Q9UPV0 1460 aa30.5■■■□□ 2.47
CACNB3-202ENST00000536187 SYNJ1O43426 1573 aa30.47■■■□□ 2.47
CACNB3-202ENST00000536187 WRNQ14191 1432 aaPredicted RBP eCLIP30.47■■■□□ 2.47
CACNB3-202ENST00000536187 CUX1P39880 1505 aa30.43■■■□□ 2.46
CACNB3-202ENST00000536187 ERCC6Q03468 1493 aa30.39■■■□□ 2.46
CACNB3-202ENST00000536187 URB2Q14146 1524 aaKnown RBP30.37■■■□□ 2.45
CACNB3-202ENST00000536187 TRIM41Q8WV44 630 aa30.34■■■□□ 2.45
CACNB3-202ENST00000536187 TOP2BQ02880 1626 aa30.32■■■□□ 2.44
CACNB3-202ENST00000536187 BIVM-ERCC5R4GMW8 1640 aa30.31■■■□□ 2.44
CACNB3-202ENST00000536187 TOPBP1Q92547 1522 aa30.28■■■□□ 2.44
CACNB3-202ENST00000536187 MRC2Q9UBG0 1479 aa30.27■■■□□ 2.44
CACNB3-202ENST00000536187 DNMBPQ6XZF7 1577 aa30.27■■■□□ 2.44
CACNB3-202ENST00000536187 THOC2Q8NI27 1593 aaKnown RBP30.27■■■□□ 2.44
CACNB3-202ENST00000536187 WDR62O43379 1518 aa30.17■■■□□ 2.42
CACNB3-202ENST00000536187 FGD5Q6ZNL6 1462 aa30.16■■■□□ 2.42
CACNB3-202ENST00000536187 POLA1P09884 1462 aaPredicted RBP30.11■■■□□ 2.41
CACNB3-202ENST00000536187 RAD54L2Q9Y4B4 1467 aa30.04■■■□□ 2.4
CACNB3-202ENST00000536187 CUX2O14529 1486 aa29.99■■■□□ 2.39
CACNB3-202ENST00000536187 SOGA1O94964 1423 aa29.99■■■□□ 2.39
CACNB3-202ENST00000536187 RUSC2Q8N2Y8 1516 aa29.96■■■□□ 2.39
CACNB3-202ENST00000536187 TARBP1Q13395 1621 aaKnown RBP29.91■■■□□ 2.38
CACNB3-202ENST00000536187 FAM9AQ8IZU1 332 aaPredicted RBP29.88■■■□□ 2.37
CACNB3-202ENST00000536187 WDR97A6NE52 1622 aa29.88■■■□□ 2.37
CACNB3-202ENST00000536187 ABCA10Q8WWZ4 1543 aa29.84■■■□□ 2.37
CACNB3-202ENST00000536187 IFT140Q96RY7 1462 aa29.78■■■□□ 2.36
CACNB3-202ENST00000536187 ZNF608Q9ULD9 1512 aaPredicted RBP29.77■■■□□ 2.36
CACNB3-202ENST00000536187 TDRD9Q8NDG6 1382 aaKnown RBP29.76■■■□□ 2.35
CACNB3-202ENST00000536187 KIF27Q86VH2 1401 aa29.7■■■□□ 2.35
CACNB3-202ENST00000536187 ABCA5Q8WWZ7 1642 aa29.7■■■□□ 2.35
CACNB3-202ENST00000536187 AQRO60306 1485 aaKnown RBP eCLIP29.68■■■□□ 2.34
CACNB3-202ENST00000536187 EIF4G3O43432 1585 aaKnown RBP29.63■■■□□ 2.33
CACNB3-202ENST00000536187 EEA1Q15075 1411 aa29.61■■■□□ 2.33
CACNB3-202ENST00000536187 GAPVD1Q14C86 1478 aa29.61■■■□□ 2.33
CACNB3-202ENST00000536187 CSRNP3Q8WYN3 585 aa29.58■■■□□ 2.33
CACNB3-202ENST00000536187 IGF1RP08069 1367 aa29.57■■■□□ 2.32
CACNB3-202ENST00000536187 EHMT2Q96KQ7 1210 aa29.55■■■□□ 2.32
CACNB3-202ENST00000536187 PBRM1Q86U86 1689 aa29.55■■■□□ 2.32
CACNB3-202ENST00000536187 LOC105371045A0A1W2PR82 267 aa29.49■■■□□ 2.31
CACNB3-202ENST00000536187 ERICH3Q5RHP9 1530 aa29.46■■■□□ 2.31
CACNB3-202ENST00000536187 GRIN2BQ13224 1484 aa29.44■■■□□ 2.3
CACNB3-202ENST00000536187 PRXQ9BXM0 1461 aa29.43■■■□□ 2.3
CACNB3-202ENST00000536187 RAPGEF2Q9Y4G8 1499 aa29.4■■■□□ 2.3
CACNB3-202ENST00000536187 SNAPC4Q5SXM2 1469 aa29.38■■■□□ 2.29
CACNB3-202ENST00000536187 KIF21BO75037 1637 aa29.38■■■□□ 2.29
CACNB3-202ENST00000536187 CARMIL1Q5VZK9 1371 aa29.37■■■□□ 2.29
CACNB3-202ENST00000536187 CUL7Q14999 1698 aa29.35■■■□□ 2.29
CACNB3-202ENST00000536187 ADAMTS12P58397 1594 aa29.35■■■□□ 2.29
CACNB3-202ENST00000536187 GOLGA3Q08378 1498 aa29.26■■■□□ 2.27
CACNB3-202ENST00000536187 MAGI1Q96QZ7 1491 aaPredicted RBP29.25■■■□□ 2.27
CACNB3-202ENST00000536187 FHAD1B1AJZ9 1412 aa29.25■■■□□ 2.27
CACNB3-202ENST00000536187 SYNJ2O15056 1496 aa29.17■■■□□ 2.26
CACNB3-202ENST00000536187 UBTFP17480 764 aaKnown RBP29.14■■■□□ 2.26
CACNB3-202ENST00000536187 GRIN2AQ12879 1464 aa29.13■■■□□ 2.25
CACNB3-202ENST00000536187 FBLN2P98095 1184 aa29.12■■■□□ 2.25
CACNB3-202ENST00000536187 CHD1O14646 1710 aa29.12■■■□□ 2.25
CACNB3-202ENST00000536187 CHMP7Q8WUX9 453 aaPredicted RBP29.08■■■□□ 2.25
CACNB3-202ENST00000536187 TNIKQ9UKE5 1360 aa29.04■■■□□ 2.24
CACNB3-202ENST00000536187 CEP170Q5SW79 1584 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 206.1 ms