Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 HIST2H3DP1-201ENST00000401004 416 ntBASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 DDX43P3-201ENST00000441064 443 ntBASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 FDX1P1-201ENST00000449115 551 ntBASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 FAM197Y8-203ENST00000450145 560 ntBASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 FGFR3P6-201ENST00000457012 610 ntBASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 SCARNA2-201ENST00000458748 420 ntBASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 MOK-208ENST00000519058 917 ntTSL 2 BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 COX5A-202ENST00000562233 441 ntTSL 3 BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 TMED1-207ENST00000591695 809 ntTSL 5 BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 VPS51-217ENST00000639871 243 ntTSL 5 BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 BX276092.7-203ENST00000637198 1536 ntBASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
IGHV4-28A0A0C4DH34 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 SIRPAP1-201ENST00000448467 1770 ntBASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 SOD2-201ENST00000337404 991 ntTSL 2 BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 AC103564.2-201ENST00000432853 1299 ntBASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 AF186996.4-201ENST00000467186 377 ntBASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 AC073648.2-201ENST00000510116 352 ntBASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 AL662844.1-201ENST00000546340 181 ntBASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 AC064862.7-201ENST00000604520 867 ntBASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
IGHV4-28A0A0C4DH34 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
IGHV4-28A0A0C4DH34 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.38
IGHV4-28A0A0C4DH34 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
IGHV4-28A0A0C4DH34 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
IGHV4-28A0A0C4DH34 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
IGHV4-28A0A0C4DH34 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
IGHV4-28A0A0C4DH34 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
IGHV4-28A0A0C4DH34 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
IGHV4-28A0A0C4DH34 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC12.71□□□□□ -0.38
IGHV4-28A0A0C4DH34 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
IGHV4-28A0A0C4DH34 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
IGHV4-28A0A0C4DH34 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms