Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNIH3Q8TBE1 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
CNIH3Q8TBE1 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNIH3Q8TBE1 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNIH3Q8TBE1 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNIH3Q8TBE1 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CNIH3Q8TBE1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.15■□□□□ 0.18
CNIH3Q8TBE1 KRT8P7-201ENST00000533003 1432 ntBASIC16.15■□□□□ 0.18
CNIH3Q8TBE1 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CNIH3Q8TBE1 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.15■□□□□ 0.18
CNIH3Q8TBE1 AC009065.1-201ENST00000564055 1225 ntBASIC16.15■□□□□ 0.18
CNIH3Q8TBE1 RARRES2P10-201ENST00000564312 460 ntBASIC16.15■□□□□ 0.18
CNIH3Q8TBE1 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.15■□□□□ 0.18
CNIH3Q8TBE1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.15■□□□□ 0.18
CNIH3Q8TBE1 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.15■□□□□ 0.18
CNIH3Q8TBE1 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CNIH3Q8TBE1 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.15■□□□□ 0.18
CNIH3Q8TBE1 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.15■□□□□ 0.18
CNIH3Q8TBE1 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CNIH3Q8TBE1 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CNIH3Q8TBE1 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNIH3Q8TBE1 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.15■□□□□ 0.18
CNIH3Q8TBE1 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNIH3Q8TBE1 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNIH3Q8TBE1 RNF216P1-203ENST00000404404 2427 ntBASIC16.15■□□□□ 0.18
CNIH3Q8TBE1 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CNIH3Q8TBE1 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNIH3Q8TBE1 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.15■□□□□ 0.18
CNIH3Q8TBE1 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.18
CNIH3Q8TBE1 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CNIH3Q8TBE1 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.14■□□□□ 0.17
CNIH3Q8TBE1 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CNIH3Q8TBE1 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNIH3Q8TBE1 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.14■□□□□ 0.17
CNIH3Q8TBE1 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNIH3Q8TBE1 FER1L4-210ENST00000615531 5998 ntBASIC16.14■□□□□ 0.17
CNIH3Q8TBE1 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CNIH3Q8TBE1 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNIH3Q8TBE1 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.14■□□□□ 0.17
CNIH3Q8TBE1 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNIH3Q8TBE1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.14■□□□□ 0.17
CNIH3Q8TBE1 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CNIH3Q8TBE1 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNIH3Q8TBE1 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNIH3Q8TBE1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.14■□□□□ 0.17
CNIH3Q8TBE1 MFAP1P1-201ENST00000442257 1255 ntBASIC16.14■□□□□ 0.17
CNIH3Q8TBE1 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.14■□□□□ 0.17
CNIH3Q8TBE1 AC026366.1-201ENST00000488803 879 ntBASIC16.14■□□□□ 0.17
CNIH3Q8TBE1 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.14■□□□□ 0.17
CNIH3Q8TBE1 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.14■□□□□ 0.17
CNIH3Q8TBE1 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNIH3Q8TBE1 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CNIH3Q8TBE1 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNIH3Q8TBE1 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNIH3Q8TBE1 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CNIH3Q8TBE1 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNIH3Q8TBE1 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CNIH3Q8TBE1 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CNIH3Q8TBE1 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNIH3Q8TBE1 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CNIH3Q8TBE1 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.14■□□□□ 0.17
CNIH3Q8TBE1 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNIH3Q8TBE1 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNIH3Q8TBE1 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNIH3Q8TBE1 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.14■□□□□ 0.17
CNIH3Q8TBE1 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.14■□□□□ 0.17
CNIH3Q8TBE1 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.14■□□□□ 0.17
CNIH3Q8TBE1 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNIH3Q8TBE1 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 AC016396.2-201ENST00000562575 1417 ntBASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 AL353807.1-201ENST00000427475 662 ntBASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 AC116407.2-201ENST00000613639 860 ntBASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNIH3Q8TBE1 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms