Protein–RNA interactions for Protein: Q9BY41

HDAC8, Histone deacetylase 8, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8Q9BY41 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC8Q9BY41 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.51■□□□□ 0.39
HDAC8Q9BY41 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
HDAC8Q9BY41 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC8Q9BY41 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.51■□□□□ 0.39
HDAC8Q9BY41 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC8Q9BY41 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC8Q9BY41 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC8Q9BY41 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.5■□□□□ 0.39
HDAC8Q9BY41 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HDAC8Q9BY41 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
HDAC8Q9BY41 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.5■□□□□ 0.39
HDAC8Q9BY41 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.5■□□□□ 0.39
HDAC8Q9BY41 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HDAC8Q9BY41 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.5■□□□□ 0.39
HDAC8Q9BY41 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HDAC8Q9BY41 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC8Q9BY41 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
HDAC8Q9BY41 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.5■□□□□ 0.39
HDAC8Q9BY41 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC8Q9BY41 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC8Q9BY41 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.5■□□□□ 0.39
HDAC8Q9BY41 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.5■□□□□ 0.39
HDAC8Q9BY41 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC8Q9BY41 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC8Q9BY41 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC8Q9BY41 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC8Q9BY41 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC8Q9BY41 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HDAC8Q9BY41 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC8Q9BY41 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC8Q9BY41 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC8Q9BY41 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
HDAC8Q9BY41 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HDAC8Q9BY41 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HDAC8Q9BY41 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HDAC8Q9BY41 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC8Q9BY41 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.5■□□□□ 0.39
HDAC8Q9BY41 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.5■□□□□ 0.39
HDAC8Q9BY41 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.5■□□□□ 0.39
HDAC8Q9BY41 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HDAC8Q9BY41 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC8Q9BY41 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC8Q9BY41 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC8Q9BY41 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC8Q9BY41 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.49■□□□□ 0.39
HDAC8Q9BY41 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC8Q9BY41 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC8Q9BY41 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC8Q9BY41 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
HDAC8Q9BY41 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
HDAC8Q9BY41 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
HDAC8Q9BY41 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.49■□□□□ 0.39
HDAC8Q9BY41 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.49■□□□□ 0.39
HDAC8Q9BY41 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC8Q9BY41 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC8Q9BY41 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC8Q9BY41 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC8Q9BY41 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.49■□□□□ 0.39
HDAC8Q9BY41 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.49■□□□□ 0.39
HDAC8Q9BY41 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.49■□□□□ 0.39
HDAC8Q9BY41 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.49■□□□□ 0.39
HDAC8Q9BY41 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC8Q9BY41 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.49■□□□□ 0.39
HDAC8Q9BY41 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.49■□□□□ 0.39
HDAC8Q9BY41 AL139424.1-201ENST00000607572 797 ntBASIC17.49■□□□□ 0.39
HDAC8Q9BY41 AC027601.4-201ENST00000611259 610 ntBASIC17.49■□□□□ 0.39
HDAC8Q9BY41 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.49■□□□□ 0.39
HDAC8Q9BY41 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC8Q9BY41 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.49■□□□□ 0.39
HDAC8Q9BY41 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC8Q9BY41 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC8Q9BY41 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HDAC8Q9BY41 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC8Q9BY41 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC8Q9BY41 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC8Q9BY41 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
HDAC8Q9BY41 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
HDAC8Q9BY41 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.48■□□□□ 0.39
HDAC8Q9BY41 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.48■□□□□ 0.39
HDAC8Q9BY41 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC8Q9BY41 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
HDAC8Q9BY41 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC8Q9BY41 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
HDAC8Q9BY41 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC8Q9BY41 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.48■□□□□ 0.39
HDAC8Q9BY41 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC8Q9BY41 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.48■□□□□ 0.39
HDAC8Q9BY41 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HDAC8Q9BY41 AL591424.1-201ENST00000442569 1213 ntBASIC17.48■□□□□ 0.39
HDAC8Q9BY41 AC009947.1-201ENST00000444350 727 ntBASIC17.48■□□□□ 0.39
HDAC8Q9BY41 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC8Q9BY41 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.48■□□□□ 0.39
HDAC8Q9BY41 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HDAC8Q9BY41 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.48■□□□□ 0.39
HDAC8Q9BY41 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
HDAC8Q9BY41 FAM197Y3-203ENST00000618346 717 ntBASIC17.48■□□□□ 0.39
HDAC8Q9BY41 AC023511.2-201ENST00000618803 211 ntBASIC17.48■□□□□ 0.39
HDAC8Q9BY41 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.48■□□□□ 0.39
HDAC8Q9BY41 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms