RNA–Protein interactions for RNA: ENST00000436744.2

NICN1-204, Transcript of nicolin 1, humanhuman

TSL 2 BASIC

Gene NICN1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1-204ENST00000436744 NISCHQ9Y2I1 1504 aa43.48■■■■■ 4.55
NICN1-204ENST00000436744 ABCC9O60706 1549 aa39.54■■■■□ 3.92
NICN1-204ENST00000436744 CCDC180Q9P1Z9 1646 aa39.08■■■■□ 3.85
NICN1-204ENST00000436744 DNAJC5BQ9UF47 199 aa37.39■■■■□ 3.58
NICN1-204ENST00000436744 RB1CC1Q8TDY2 1594 aa37.37■■■■□ 3.57
NICN1-204ENST00000436744 NACADO15069 1562 aa37.01■■■■□ 3.52
NICN1-204ENST00000436744 DCAF8L2P0C7V8 631 aa36.93■■■■□ 3.5
NICN1-204ENST00000436744 PABPN1Q86U42 306 aaKnown RBP eCLIP36.8■■■■□ 3.48
NICN1-204ENST00000436744 UNC13AQ9UPW8 1703 aa36.63■■■■□ 3.45
NICN1-204ENST00000436744 BICRAQ9NZM4 1560 aa36.38■■■■□ 3.41
NICN1-204ENST00000436744 MYO15BQ96JP2 1530 aa36.34■■■■□ 3.41
NICN1-204ENST00000436744 ZCCHC6Q5VYS8 1495 aaKnown RBP35.98■■■■□ 3.35
NICN1-204ENST00000436744 DCAF1Q9Y4B6 1507 aa35.79■■■■□ 3.32
NICN1-204ENST00000436744 SCRIBQ14160 1630 aa35.75■■■■□ 3.31
NICN1-204ENST00000436744 SHROOM4Q9ULL8 1493 aa35.67■■■■□ 3.3
NICN1-204ENST00000436744 CC2D2AQ9P2K1 1620 aa35.65■■■■□ 3.3
NICN1-204ENST00000436744 CECR2Q9BXF3 1484 aa35.59■■■■□ 3.29
NICN1-204ENST00000436744 EIF4G1Q04637 1599 aaKnown RBP35.49■■■■□ 3.27
NICN1-204ENST00000436744 DNAJC5Q9H3Z4 198 aa34.42■■■■□ 3.1
NICN1-204ENST00000436744 NCAPD3P42695 1498 aa34.19■■■■□ 3.06
NICN1-204ENST00000436744 ERCC6Q03468 1493 aa34.1■■■■□ 3.05
NICN1-204ENST00000436744 ATAD2BQ9ULI0 1458 aa34.1■■■■□ 3.05
NICN1-204ENST00000436744 CUX2O14529 1486 aa34.07■■■■□ 3.04
NICN1-204ENST00000436744 SMARCA4P51532 1647 aa34.01■■■■□ 3.03
NICN1-204ENST00000436744 SMARCA2P51531 1590 aa33.93■■■■□ 3.02
NICN1-204ENST00000436744 HMGXB3Q12766 1538 aa33.91■■■■□ 3.02
NICN1-204ENST00000436744 NESP48681 1621 aa33.9■■■■□ 3.02
NICN1-204ENST00000436744 BAZ1BQ9UIG0 1483 aaKnown RBP33.76■■■□□ 2.99
NICN1-204ENST00000436744 BAZ1AQ9NRL2 1556 aaPredicted RBP33.73■■■□□ 2.99
NICN1-204ENST00000436744 PEG3Q9GZU2 1588 aa33.6■■■□□ 2.97
NICN1-204ENST00000436744 MROH2BQ7Z745 1585 aa33.57■■■□□ 2.96
NICN1-204ENST00000436744 THOC2Q8NI27 1593 aaKnown RBP33.55■■■□□ 2.96
NICN1-204ENST00000436744 LAMC3Q9Y6N6 1575 aa33.47■■■□□ 2.95
NICN1-204ENST00000436744 KIF21AQ7Z4S6 1674 aa33.42■■■□□ 2.94
NICN1-204ENST00000436744 PDS5BQ9NTI5 1447 aa33.28■■■□□ 2.92
NICN1-204ENST00000436744 WIZO95785 1651 aa33.17■■■□□ 2.9
NICN1-204ENST00000436744 CADPSQ9ULU8 1353 aa33.16■■■□□ 2.9
NICN1-204ENST00000436744 MRC2Q9UBG0 1479 aa33.06■■■□□ 2.88
NICN1-204ENST00000436744 WDR62O43379 1518 aa32.99■■■□□ 2.87
NICN1-204ENST00000436744 TRIM41Q8WV44 630 aa32.92■■■□□ 2.86
NICN1-204ENST00000436744 CEP164Q9UPV0 1460 aa32.87■■■□□ 2.85
NICN1-204ENST00000436744 FANCD2Q9BXW9 1451 aa32.83■■■□□ 2.85
NICN1-204ENST00000436744 RSF1Q96T23 1441 aaPredicted RBP32.73■■■□□ 2.83
NICN1-204ENST00000436744 CFTRP13569 1480 aa32.72■■■□□ 2.83
NICN1-204ENST00000436744 TOP2AP11388 1531 aaKnown RBP32.66■■■□□ 2.82
NICN1-204ENST00000436744 URB2Q14146 1524 aaKnown RBP32.61■■■□□ 2.81
NICN1-204ENST00000436744 OSCARQ8IYS5 282 aa32.47■■■□□ 2.79
NICN1-204ENST00000436744 PRDM2Q13029 1718 aa32.37■■■□□ 2.77
NICN1-204ENST00000436744 CCDC88BA6NC98 1476 aa32.32■■■□□ 2.76
NICN1-204ENST00000436744 ZNF608Q9ULD9 1512 aaPredicted RBP32.29■■■□□ 2.76
NICN1-204ENST00000436744 IFT140Q96RY7 1462 aa32.21■■■□□ 2.75
NICN1-204ENST00000436744 TOPBP1Q92547 1522 aa32.18■■■□□ 2.74
NICN1-204ENST00000436744 RIMBP3CA6NJZ7 1639 aa32.17■■■□□ 2.74
NICN1-204ENST00000436744 RIMBP3BA6NNM3 1639 aa32.17■■■□□ 2.74
NICN1-204ENST00000436744 RIMBP3Q9UFD9 1639 aa32.17■■■□□ 2.74
NICN1-204ENST00000436744 EIF4G3O43432 1585 aaKnown RBP32.06■■■□□ 2.72
NICN1-204ENST00000436744 ARHGEF11O15085 1522 aa32.02■■■□□ 2.72
NICN1-204ENST00000436744 DNMBPQ6XZF7 1577 aa32.01■■■□□ 2.71
NICN1-204ENST00000436744 ABCC8Q09428 1581 aa31.95■■■□□ 2.71
NICN1-204ENST00000436744 AQRO60306 1485 aaKnown RBP eCLIP31.95■■■□□ 2.73e-7■■■□□ 17
NICN1-204ENST00000436744 TARBP1Q13395 1621 aaKnown RBP31.92■■■□□ 2.7
NICN1-204ENST00000436744 CHD1O14646 1710 aa31.89■■■□□ 2.7
NICN1-204ENST00000436744 POLA1P09884 1462 aaPredicted RBP31.84■■■□□ 2.69
NICN1-204ENST00000436744 CYB5RLQ6IPT4 315 aa31.82■■■□□ 2.68
NICN1-204ENST00000436744 FBLN2P98095 1184 aa31.8■■■□□ 2.68
NICN1-204ENST00000436744 RAD54L2Q9Y4B4 1467 aa31.78■■■□□ 2.68
NICN1-204ENST00000436744 ARAP1Q96P48 1450 aa31.71■■■□□ 2.67
NICN1-204ENST00000436744 TDRD9Q8NDG6 1382 aaKnown RBP31.69■■■□□ 2.66
NICN1-204ENST00000436744 SOGA1O94964 1423 aa31.66■■■□□ 2.66
NICN1-204ENST00000436744 FGD5Q6ZNL6 1462 aa31.61■■■□□ 2.65
NICN1-204ENST00000436744 SNAPC4Q5SXM2 1469 aa31.6■■■□□ 2.65
NICN1-204ENST00000436744 TRHP20396 242 aaPredicted RBP31.56■■■□□ 2.64
NICN1-204ENST00000436744 CUX1P39880 1505 aa31.54■■■□□ 2.64
NICN1-204ENST00000436744 CLASP1Q7Z460 1538 aa31.48■■■□□ 2.63
NICN1-204ENST00000436744 CHMP7Q8WUX9 453 aaPredicted RBP31.45■■■□□ 2.63
NICN1-204ENST00000436744 WDR97A6NE52 1622 aa31.44■■■□□ 2.62
NICN1-204ENST00000436744 MAGI1Q96QZ7 1491 aaPredicted RBP31.41■■■□□ 2.62
NICN1-204ENST00000436744 GRIN2BQ13224 1484 aa31.4■■■□□ 2.62
NICN1-204ENST00000436744 SYNJ1O43426 1573 aa31.39■■■□□ 2.62
NICN1-204ENST00000436744 SYNJ2O15056 1496 aa31.33■■■□□ 2.61
NICN1-204ENST00000436744 PBRM1Q86U86 1689 aa31.32■■■□□ 2.6
NICN1-204ENST00000436744 GAPVD1Q14C86 1478 aa31.27■■■□□ 2.6
NICN1-204ENST00000436744 ABCA5Q8WWZ7 1642 aa31.2■■■□□ 2.58
NICN1-204ENST00000436744 ABCA10Q8WWZ4 1543 aa31.18■■■□□ 2.58
NICN1-204ENST00000436744 SUPT5HO00267 1087 aaKnown RBP31.14■■■□□ 2.58
NICN1-204ENST00000436744 ERCC6L2Q5T890 1561 aa31.07■■■□□ 2.56
NICN1-204ENST00000436744 GRIN2AQ12879 1464 aa31.03■■■□□ 2.56
NICN1-204ENST00000436744 ADAMTS12P58397 1594 aa31■■■□□ 2.55
NICN1-204ENST00000436744 CEP170Q5SW79 1584 aa30.98■■■□□ 2.55
NICN1-204ENST00000436744 WRNQ14191 1432 aaPredicted RBP eCLIP30.98■■■□□ 2.55
NICN1-204ENST00000436744 BIVM-ERCC5R4GMW8 1640 aa30.91■■■□□ 2.54
NICN1-204ENST00000436744 NUP160Q12769 1436 aa30.91■■■□□ 2.54
NICN1-204ENST00000436744 TOP2BQ02880 1626 aa30.9■■■□□ 2.54
NICN1-204ENST00000436744 FHAD1B1AJZ9 1412 aa30.84■■■□□ 2.53
NICN1-204ENST00000436744 AEBP2Q6ZN18 517 aaPredicted RBP30.82■■■□□ 2.52
NICN1-204ENST00000436744 SHROOM2Q13796 1616 aa30.81■■■□□ 2.52
NICN1-204ENST00000436744 ERICH3Q5RHP9 1530 aa30.75■■■□□ 2.51
NICN1-204ENST00000436744 PRG4Q92954 1404 aaPredicted RBP30.67■■■□□ 2.5
NICN1-204ENST00000436744 KIF13AQ9H1H9 1805 aa30.61■■■□□ 2.49
NICN1-204ENST00000436744 JPH4Q96JJ6 628 aa30.59■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms