Protein–RNA interactions for Protein: O14828

SCAMP3, Secretory carrier-associated membrane protein 3, humanhuman

Known RBP Predictions only

Length 347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3O14828 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.28■□□□□ 0.52
SCAMP3O14828 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.28■□□□□ 0.52
SCAMP3O14828 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SCAMP3O14828 AC104109.2-201ENST00000602919 1418 ntBASIC18.28■□□□□ 0.52
SCAMP3O14828 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.28■□□□□ 0.52
SCAMP3O14828 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCAMP3O14828 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SCAMP3O14828 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.28■□□□□ 0.52
SCAMP3O14828 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SCAMP3O14828 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCAMP3O14828 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCAMP3O14828 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCAMP3O14828 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SCAMP3O14828 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.28■□□□□ 0.52
SCAMP3O14828 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCAMP3O14828 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCAMP3O14828 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.27■□□□□ 0.52
SCAMP3O14828 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.27■□□□□ 0.52
SCAMP3O14828 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.27■□□□□ 0.52
SCAMP3O14828 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
SCAMP3O14828 HLA-J-201ENST00000462773 1622 ntBASIC18.27■□□□□ 0.52
SCAMP3O14828 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
SCAMP3O14828 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCAMP3O14828 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SCAMP3O14828 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SCAMP3O14828 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SCAMP3O14828 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
SCAMP3O14828 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCAMP3O14828 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCAMP3O14828 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCAMP3O14828 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.27■□□□□ 0.52
SCAMP3O14828 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.27■□□□□ 0.52
SCAMP3O14828 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.27■□□□□ 0.52
SCAMP3O14828 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.27■□□□□ 0.52
SCAMP3O14828 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.27■□□□□ 0.52
SCAMP3O14828 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.27■□□□□ 0.52
SCAMP3O14828 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCAMP3O14828 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.27■□□□□ 0.52
SCAMP3O14828 AC073592.5-201ENST00000624854 528 ntBASIC18.27■□□□□ 0.52
SCAMP3O14828 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCAMP3O14828 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SCAMP3O14828 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SCAMP3O14828 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCAMP3O14828 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.27■□□□□ 0.51
SCAMP3O14828 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SCAMP3O14828 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.27■□□□□ 0.51
SCAMP3O14828 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SCAMP3O14828 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SCAMP3O14828 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SCAMP3O14828 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SCAMP3O14828 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
SCAMP3O14828 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SCAMP3O14828 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
SCAMP3O14828 FZD10-202ENST00000539839 3282 ntBASIC18.27■□□□□ 0.51
SCAMP3O14828 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
SCAMP3O14828 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
SCAMP3O14828 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SCAMP3O14828 AC148477.5-201ENST00000625164 1645 ntBASIC18.27■□□□□ 0.51
SCAMP3O14828 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
SCAMP3O14828 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SCAMP3O14828 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.27■□□□□ 0.51
SCAMP3O14828 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SCAMP3O14828 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCAMP3O14828 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.26■□□□□ 0.51
SCAMP3O14828 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCAMP3O14828 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.26■□□□□ 0.51
SCAMP3O14828 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.26■□□□□ 0.51
SCAMP3O14828 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCAMP3O14828 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCAMP3O14828 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.26■□□□□ 0.51
SCAMP3O14828 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.26■□□□□ 0.51
SCAMP3O14828 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCAMP3O14828 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SCAMP3O14828 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
SCAMP3O14828 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCAMP3O14828 COX5BP2-201ENST00000392354 334 ntBASIC18.26■□□□□ 0.51
SCAMP3O14828 PMS2P1-201ENST00000431037 1228 ntBASIC18.26■□□□□ 0.51
SCAMP3O14828 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.26■□□□□ 0.51
SCAMP3O14828 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.26■□□□□ 0.51
SCAMP3O14828 AC106730.1-201ENST00000566722 1090 ntBASIC18.26■□□□□ 0.51
SCAMP3O14828 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.26■□□□□ 0.51
SCAMP3O14828 AD001527.2-201ENST00000622994 785 ntBASIC18.26■□□□□ 0.51
SCAMP3O14828 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCAMP3O14828 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCAMP3O14828 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCAMP3O14828 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.26■□□□□ 0.51
SCAMP3O14828 AC079776.2-201ENST00000641154 1609 ntBASIC18.26■□□□□ 0.51
SCAMP3O14828 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SCAMP3O14828 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCAMP3O14828 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
SCAMP3O14828 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.25■□□□□ 0.51
SCAMP3O14828 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCAMP3O14828 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCAMP3O14828 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.25■□□□□ 0.51
SCAMP3O14828 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SCAMP3O14828 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.25■□□□□ 0.51
SCAMP3O14828 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.25■□□□□ 0.51
SCAMP3O14828 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCAMP3O14828 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
SCAMP3O14828 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms