RNA–Protein interactions for RNA: ENST00000307435.10

FAM90A1-201, Transcript of family with sequence similarity 90 member A1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM90A1, Length 2,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A1-201ENST00000307435 NISCHQ9Y2I1 1504 aa38.71■■■■□ 3.79
FAM90A1-201ENST00000307435 CCDC180Q9P1Z9 1646 aa32.96■■■□□ 2.87
FAM90A1-201ENST00000307435 SHROOM4Q9ULL8 1493 aa32.91■■■□□ 2.86
FAM90A1-201ENST00000307435 ZCCHC6Q5VYS8 1495 aaKnown RBP32.79■■■□□ 2.84
FAM90A1-201ENST00000307435 SUPT5HO00267 1087 aaKnown RBP32.28■■■□□ 2.76
FAM90A1-201ENST00000307435 DCAF8L2P0C7V8 631 aa31.85■■■□□ 2.69
FAM90A1-201ENST00000307435 DCAF1Q9Y4B6 1507 aa31.82■■■□□ 2.68
FAM90A1-201ENST00000307435 CHIC1Q5VXU3 224 aa31.49■■■□□ 2.63
FAM90A1-201ENST00000307435 MYO15BQ96JP2 1530 aa31.45■■■□□ 2.62
FAM90A1-201ENST00000307435 ABCC9O60706 1549 aa30.98■■■□□ 2.55
FAM90A1-201ENST00000307435 SCRIBQ14160 1630 aa30.82■■■□□ 2.52
FAM90A1-201ENST00000307435 HRCP23327 699 aa30.66■■■□□ 2.5
FAM90A1-201ENST00000307435 RSF1Q96T23 1441 aaPredicted RBP30.63■■■□□ 2.49
FAM90A1-201ENST00000307435 PCGF6Q9BYE7 350 aa30.54■■■□□ 2.48
FAM90A1-201ENST00000307435 LOC105371045A0A1W2PR82 267 aa30.5■■■□□ 2.47
FAM90A1-201ENST00000307435 NACADO15069 1562 aa30.41■■■□□ 2.46
FAM90A1-201ENST00000307435 RB1CC1Q8TDY2 1594 aa30.36■■■□□ 2.45
FAM90A1-201ENST00000307435 CECR2Q9BXF3 1484 aa30.13■■■□□ 2.41
FAM90A1-201ENST00000307435 TRIM41Q8WV44 630 aa30.11■■■□□ 2.41
FAM90A1-201ENST00000307435 MROH2BQ7Z745 1585 aa30.07■■■□□ 2.4
FAM90A1-201ENST00000307435 TRIM26Q12899 539 aaPredicted RBP30■■■□□ 2.39
FAM90A1-201ENST00000307435 PPARGC1BQ86YN6 1023 aaKnown RBP29.94■■■□□ 2.38
FAM90A1-201ENST00000307435 WIZO95785 1651 aa29.94■■■□□ 2.38
FAM90A1-201ENST00000307435 BAZ1AQ9NRL2 1556 aaPredicted RBP29.81■■■□□ 2.36
FAM90A1-201ENST00000307435 FAM9AQ8IZU1 332 aaPredicted RBP29.8■■■□□ 2.36
FAM90A1-201ENST00000307435 EIF4G1Q04637 1599 aaKnown RBP29.65■■■□□ 2.34
FAM90A1-201ENST00000307435 UNC13AQ9UPW8 1703 aa29.5■■■□□ 2.31
FAM90A1-201ENST00000307435 TOP2AP11388 1531 aaKnown RBP29.5■■■□□ 2.31
FAM90A1-201ENST00000307435 EHMT2Q96KQ7 1210 aa29.5■■■□□ 2.31
FAM90A1-201ENST00000307435 SMARCA4P51532 1647 aa29.49■■■□□ 2.31
FAM90A1-201ENST00000307435 ZEB1P37275 1124 aaPredicted RBP29.39■■■□□ 2.3
FAM90A1-201ENST00000307435 SMARCA2P51531 1590 aa29.33■■■□□ 2.29
FAM90A1-201ENST00000307435 CCDC88BA6NC98 1476 aa29.32■■■□□ 2.28
FAM90A1-201ENST00000307435 ABCC8Q09428 1581 aa29.27■■■□□ 2.28
FAM90A1-201ENST00000307435 BICRAQ9NZM4 1560 aa29.08■■■□□ 2.25
FAM90A1-201ENST00000307435 SOGA1O94964 1423 aa28.98■■■□□ 2.23
FAM90A1-201ENST00000307435 PEG3Q9GZU2 1588 aa28.95■■■□□ 2.23
FAM90A1-201ENST00000307435 WRNQ14191 1432 aaPredicted RBP eCLIP28.94■■■□□ 2.22
FAM90A1-201ENST00000307435 PABPN1Q86U42 306 aaKnown RBP eCLIP28.94■■■□□ 2.22
FAM90A1-201ENST00000307435 EEA1Q15075 1411 aa28.91■■■□□ 2.22
FAM90A1-201ENST00000307435 CEP162Q5TB80 1403 aa28.91■■■□□ 2.22
FAM90A1-201ENST00000307435 TNIKQ9UKE5 1360 aa28.87■■■□□ 2.21
FAM90A1-201ENST00000307435 RUSC2Q8N2Y8 1516 aa28.83■■■□□ 2.21
FAM90A1-201ENST00000307435 CSRNP3Q8WYN3 585 aa28.8■■■□□ 2.2
FAM90A1-201ENST00000307435 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.74■■■□□ 2.19
FAM90A1-201ENST00000307435 GOLGA3Q08378 1498 aa28.71■■■□□ 2.19
FAM90A1-201ENST00000307435 CCER1Q8TC90 406 aaPredicted RBP28.68■■■□□ 2.18
FAM90A1-201ENST00000307435 ATAD2BQ9ULI0 1458 aa28.67■■■□□ 2.18
FAM90A1-201ENST00000307435 SYNJ1O43426 1573 aa28.66■■■□□ 2.18
FAM90A1-201ENST00000307435 UBTFP17480 764 aaKnown RBP28.65■■■□□ 2.18
FAM90A1-201ENST00000307435 BAZ1BQ9UIG0 1483 aaKnown RBP28.6■■■□□ 2.17
FAM90A1-201ENST00000307435 TTBK1Q5TCY1 1321 aaPredicted RBP28.6■■■□□ 2.17
FAM90A1-201ENST00000307435 KIF21BO75037 1637 aa28.56■■■□□ 2.16
FAM90A1-201ENST00000307435 CEP164Q9UPV0 1460 aa28.54■■■□□ 2.16
FAM90A1-201ENST00000307435 CLIP1P30622 1438 aa28.35■■■□□ 2.13
FAM90A1-201ENST00000307435 TOP2BQ02880 1626 aa28.33■■■□□ 2.13
FAM90A1-201ENST00000307435 RAPGEF2Q9Y4G8 1499 aa28.29■■■□□ 2.12
FAM90A1-201ENST00000307435 SCAF1Q9H7N4 1312 aaKnown RBP28.26■■■□□ 2.12
FAM90A1-201ENST00000307435 VPS8Q8N3P4 1428 aa28.26■■■□□ 2.11
FAM90A1-201ENST00000307435 BIVM-ERCC5R4GMW8 1640 aa28.25■■■□□ 2.11
FAM90A1-201ENST00000307435 DIEXFQ68CQ4 756 aaKnown RBP28.17■■■□□ 2.1
FAM90A1-201ENST00000307435 HMGXB3Q12766 1538 aa28.16■■■□□ 2.1
FAM90A1-201ENST00000307435 NCAPD3P42695 1498 aa28.11■■■□□ 2.09
FAM90A1-201ENST00000307435 ERICH3Q5RHP9 1530 aa28.08■■■□□ 2.09
FAM90A1-201ENST00000307435 HNRNPUL2Q1KMD3 747 aaKnown RBP28.04■■■□□ 2.08
FAM90A1-201ENST00000307435 PRXQ9BXM0 1461 aa28.04■■■□□ 2.08
FAM90A1-201ENST00000307435 APLP2Q06481 763 aa28.03■■■□□ 2.08
FAM90A1-201ENST00000307435 CUX1P39880 1505 aa28.01■■■□□ 2.07
FAM90A1-201ENST00000307435 ACIN1Q9UKV3 1341 aaKnown RBP28■■■□□ 2.07
FAM90A1-201ENST00000307435 RANGAP1P46060 587 aaPredicted RBP28■■■□□ 2.07
FAM90A1-201ENST00000307435 ZNF316A6NFI3 1004 aaPredicted RBP27.97■■■□□ 2.07
FAM90A1-201ENST00000307435 NEUROD1Q13562 356 aa27.93■■■□□ 2.06
FAM90A1-201ENST00000307435 ARAP1Q96P48 1450 aa27.92■■■□□ 2.06
FAM90A1-201ENST00000307435 CFTRP13569 1480 aa27.91■■■□□ 2.06
FAM90A1-201ENST00000307435 KIF27Q86VH2 1401 aa27.87■■■□□ 2.05
FAM90A1-201ENST00000307435 CENPBP07199 599 aaPredicted RBP27.83■■■□□ 2.05
FAM90A1-201ENST00000307435 PRDM2Q13029 1718 aa27.81■■■□□ 2.04
FAM90A1-201ENST00000307435 PELP1Q8IZL8 1130 aaKnown RBP27.77■■■□□ 2.04
FAM90A1-201ENST00000307435 KANK4Q5T7N3 995 aaPredicted RBP27.69■■■□□ 2.02
FAM90A1-201ENST00000307435 ARHGAP35Q9NRY4 1499 aa27.66■■■□□ 2.02
FAM90A1-201ENST00000307435 GTF3C3Q9Y5Q9 886 aa27.64■■■□□ 2.02
FAM90A1-201ENST00000307435 RRBP1Q9P2E9 1410 aaKnown RBP27.63■■■□□ 2.01
FAM90A1-201ENST00000307435 CLSPNQ9HAW4 1339 aa27.61■■■□□ 2.01
FAM90A1-201ENST00000307435 DHX57Q6P158 1386 aaKnown RBP27.61■■■□□ 2.01
FAM90A1-201ENST00000307435 CUX2O14529 1486 aa27.58■■■□□ 2.01
FAM90A1-201ENST00000307435 CADPSQ9ULU8 1353 aa27.55■■■□□ 2
FAM90A1-201ENST00000307435 MIER1Q8N108 512 aa27.54■■■□□ 2
FAM90A1-201ENST00000307435 IGF1RP08069 1367 aa27.54■■■□□ 2
FAM90A1-201ENST00000307435 FGD5Q6ZNL6 1462 aa27.48■■□□□ 1.99
FAM90A1-201ENST00000307435 CCNB3Q8WWL7 1395 aa27.47■■□□□ 1.99
FAM90A1-201ENST00000307435 YTHDC1Q96MU7 727 aaKnown RBP27.45■■□□□ 1.99
FAM90A1-201ENST00000307435 CARMIL1Q5VZK9 1371 aa27.42■■□□□ 1.98
FAM90A1-201ENST00000307435 TIAM1Q13009 1591 aa27.4■■□□□ 1.98
FAM90A1-201ENST00000307435 MAP3K1Q13233 1512 aa27.4■■□□□ 1.98
FAM90A1-201ENST00000307435 CC2D2AQ9P2K1 1620 aa27.36■■□□□ 1.97
FAM90A1-201ENST00000307435 FANCD2Q9BXW9 1451 aa27.3■■□□□ 1.96
FAM90A1-201ENST00000307435 LRRC9Q6ZRR7 1453 aa27.27■■□□□ 1.96
FAM90A1-201ENST00000307435 ITGAEP38570 1179 aa27.25■■□□□ 1.95
FAM90A1-201ENST00000307435 CFAP43Q8NDM7 1665 aa27.24■■□□□ 1.95
FAM90A1-201ENST00000307435 DNMBPQ6XZF7 1577 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms