Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 NIFKP9-201ENST00000419265 221 ntBASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 C1QL1P1-201ENST00000568105 661 ntBASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 HLA-DQB1-201ENST00000374943 1656 ntBASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV9-2A0A087WT02 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TRAV9-2A0A087WT02 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV9-2A0A087WT02 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV9-2A0A087WT02 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV9-2A0A087WT02 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV9-2A0A087WT02 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV9-2A0A087WT02 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.23□□□□□ -0.29
TRAV9-2A0A087WT02 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV9-2A0A087WT02 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV9-2A0A087WT02 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV9-2A0A087WT02 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV9-2A0A087WT02 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV9-2A0A087WT02 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV9-2A0A087WT02 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV9-2A0A087WT02 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV9-2A0A087WT02 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
TRAV9-2A0A087WT02 SAPCD2P4-201ENST00000424595 1171 ntBASIC13.23□□□□□ -0.29
TRAV9-2A0A087WT02 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV9-2A0A087WT02 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV9-2A0A087WT02 SNORA78-201ENST00000459373 127 ntBASIC13.23□□□□□ -0.29
TRAV9-2A0A087WT02 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC13.23□□□□□ -0.29
TRAV9-2A0A087WT02 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC13.23□□□□□ -0.29
TRAV9-2A0A087WT02 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC13.23□□□□□ -0.29
TRAV9-2A0A087WT02 CR392000.1-201ENST00000624770 1228 ntBASIC13.23□□□□□ -0.29
TRAV9-2A0A087WT02 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV9-2A0A087WT02 SDHAP1-207ENST00000440850 2000 ntBASIC13.23□□□□□ -0.29
TRAV9-2A0A087WT02 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC13.23□□□□□ -0.29
TRAV9-2A0A087WT02 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV9-2A0A087WT02 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV9-2A0A087WT02 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV9-2A0A087WT02 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV9-2A0A087WT02 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV9-2A0A087WT02 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV9-2A0A087WT02 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV9-2A0A087WT02 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.23□□□□□ -0.29
TRAV9-2A0A087WT02 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TRAV9-2A0A087WT02 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TRAV9-2A0A087WT02 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV9-2A0A087WT02 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
TRAV9-2A0A087WT02 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
TRAV9-2A0A087WT02 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.22□□□□□ -0.29
TRAV9-2A0A087WT02 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV9-2A0A087WT02 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV9-2A0A087WT02 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
TRAV9-2A0A087WT02 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV9-2A0A087WT02 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
TRAV9-2A0A087WT02 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV9-2A0A087WT02 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV9-2A0A087WT02 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV9-2A0A087WT02 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV9-2A0A087WT02 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV9-2A0A087WT02 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV9-2A0A087WT02 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV9-2A0A087WT02 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV9-2A0A087WT02 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
TRAV9-2A0A087WT02 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV9-2A0A087WT02 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC13.22□□□□□ -0.29
TRAV9-2A0A087WT02 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms