Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RAB42Q8N4Z0 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB42Q8N4Z0 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAB42Q8N4Z0 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB42Q8N4Z0 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB42Q8N4Z0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB42Q8N4Z0 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB42Q8N4Z0 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
RAB42Q8N4Z0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAB42Q8N4Z0 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB42Q8N4Z0 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB42Q8N4Z0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB42Q8N4Z0 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB42Q8N4Z0 AC009949.1-201ENST00000623048 1830 ntBASIC17.24■□□□□ 0.35
RAB42Q8N4Z0 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RAB42Q8N4Z0 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB42Q8N4Z0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.24■□□□□ 0.35
RAB42Q8N4Z0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB42Q8N4Z0 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB42Q8N4Z0 FAM220CP-201ENST00000395253 831 ntBASIC17.24■□□□□ 0.35
RAB42Q8N4Z0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB42Q8N4Z0 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB42Q8N4Z0 AC096582.2-201ENST00000510860 516 ntBASIC17.24■□□□□ 0.35
RAB42Q8N4Z0 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.24■□□□□ 0.35
RAB42Q8N4Z0 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB42Q8N4Z0 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.24■□□□□ 0.35
RAB42Q8N4Z0 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.24■□□□□ 0.35
RAB42Q8N4Z0 PRELID1P1-202ENST00000567272 903 ntBASIC17.24■□□□□ 0.35
RAB42Q8N4Z0 AC005336.2-201ENST00000593183 939 ntBASIC17.24■□□□□ 0.35
RAB42Q8N4Z0 AC099336.1-202ENST00000602961 463 ntBASIC17.24■□□□□ 0.35
RAB42Q8N4Z0 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
RAB42Q8N4Z0 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RAB42Q8N4Z0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB42Q8N4Z0 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB42Q8N4Z0 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB42Q8N4Z0 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB42Q8N4Z0 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RAB42Q8N4Z0 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.24■□□□□ 0.35
RAB42Q8N4Z0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB42Q8N4Z0 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB42Q8N4Z0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.24■□□□□ 0.35
RAB42Q8N4Z0 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB42Q8N4Z0 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RAB42Q8N4Z0 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RAB42Q8N4Z0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RAB42Q8N4Z0 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB42Q8N4Z0 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB42Q8N4Z0 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RAB42Q8N4Z0 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
RAB42Q8N4Z0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB42Q8N4Z0 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB42Q8N4Z0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB42Q8N4Z0 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB42Q8N4Z0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB42Q8N4Z0 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB42Q8N4Z0 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB42Q8N4Z0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB42Q8N4Z0 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RAB42Q8N4Z0 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB42Q8N4Z0 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB42Q8N4Z0 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB42Q8N4Z0 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB42Q8N4Z0 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB42Q8N4Z0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RAB42Q8N4Z0 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB42Q8N4Z0 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB42Q8N4Z0 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB42Q8N4Z0 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
RAB42Q8N4Z0 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB42Q8N4Z0 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RAB42Q8N4Z0 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.23■□□□□ 0.35
RAB42Q8N4Z0 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.23■□□□□ 0.35
RAB42Q8N4Z0 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.23■□□□□ 0.35
RAB42Q8N4Z0 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB42Q8N4Z0 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB42Q8N4Z0 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB42Q8N4Z0 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB42Q8N4Z0 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RAB42Q8N4Z0 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB42Q8N4Z0 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB42Q8N4Z0 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB42Q8N4Z0 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.22■□□□□ 0.35
RAB42Q8N4Z0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB42Q8N4Z0 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB42Q8N4Z0 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.22■□□□□ 0.35
RAB42Q8N4Z0 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
RAB42Q8N4Z0 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB42Q8N4Z0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB42Q8N4Z0 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB42Q8N4Z0 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB42Q8N4Z0 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.22■□□□□ 0.35
RAB42Q8N4Z0 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB42Q8N4Z0 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB42Q8N4Z0 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.22■□□□□ 0.35
RAB42Q8N4Z0 IGHV3-47-201ENST00000425060 335 ntBASIC17.22■□□□□ 0.35
RAB42Q8N4Z0 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RAB42Q8N4Z0 NUS1P1-201ENST00000446295 882 ntBASIC17.22■□□□□ 0.35
RAB42Q8N4Z0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.22■□□□□ 0.35
RAB42Q8N4Z0 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB42Q8N4Z0 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms