Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 AL356652.1-201ENST00000615962 565 ntBASIC8.95□□□□□ -0.98
LINC01554Q52M75 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC8.95□□□□□ -0.98
LINC01554Q52M75 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01554Q52M75 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC8.95□□□□□ -0.98
LINC01554Q52M75 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01554Q52M75 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01554Q52M75 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01554Q52M75 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC8.95□□□□□ -0.98
LINC01554Q52M75 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC8.95□□□□□ -0.98
LINC01554Q52M75 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC8.95□□□□□ -0.98
LINC01554Q52M75 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01554Q52M75 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01554Q52M75 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
LINC01554Q52M75 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01554Q52M75 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01554Q52M75 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01554Q52M75 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01554Q52M75 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01554Q52M75 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01554Q52M75 LYSMD4-203ENST00000378904 2122 ntBASIC8.95□□□□□ -0.98
LINC01554Q52M75 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01554Q52M75 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01554Q52M75 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01554Q52M75 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC8.95□□□□□ -0.98
LINC01554Q52M75 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
LINC01554Q52M75 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01554Q52M75 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LINC01554Q52M75 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
LINC01554Q52M75 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01554Q52M75 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC8.94□□□□□ -0.98
LINC01554Q52M75 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC8.94□□□□□ -0.98
LINC01554Q52M75 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01554Q52M75 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC8.94□□□□□ -0.98
LINC01554Q52M75 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01554Q52M75 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01554Q52M75 CD37-204ENST00000535669 1674 ntTSL 2 BASIC8.94□□□□□ -0.98
LINC01554Q52M75 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC8.94□□□□□ -0.98
LINC01554Q52M75 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01554Q52M75 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
LINC01554Q52M75 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC8.94□□□□□ -0.98
LINC01554Q52M75 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC8.94□□□□□ -0.98
LINC01554Q52M75 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01554Q52M75 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01554Q52M75 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC8.94□□□□□ -0.98
LINC01554Q52M75 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC8.94□□□□□ -0.98
LINC01554Q52M75 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC8.94□□□□□ -0.98
LINC01554Q52M75 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01554Q52M75 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01554Q52M75 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01554Q52M75 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01554Q52M75 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01554Q52M75 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC8.94□□□□□ -0.98
LINC01554Q52M75 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC8.94□□□□□ -0.98
LINC01554Q52M75 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01554Q52M75 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
LINC01554Q52M75 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC8.94□□□□□ -0.98
LINC01554Q52M75 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC8.94□□□□□ -0.98
LINC01554Q52M75 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
LINC01554Q52M75 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01554Q52M75 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01554Q52M75 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01554Q52M75 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01554Q52M75 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01554Q52M75 AC091799.1-201ENST00000422823 811 ntBASIC8.94□□□□□ -0.98
LINC01554Q52M75 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC8.94□□□□□ -0.98
LINC01554Q52M75 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC8.94□□□□□ -0.98
LINC01554Q52M75 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC8.94□□□□□ -0.98
LINC01554Q52M75 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC8.94□□□□□ -0.98
LINC01554Q52M75 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01554Q52M75 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01554Q52M75 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
LINC01554Q52M75 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01554Q52M75 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC8.94□□□□□ -0.98
LINC01554Q52M75 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC8.94□□□□□ -0.98
LINC01554Q52M75 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
LINC01554Q52M75 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01554Q52M75 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
LINC01554Q52M75 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC8.94□□□□□ -0.98
LINC01554Q52M75 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01554Q52M75 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01554Q52M75 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01554Q52M75 KRT16P6-202ENST00000425692 1426 ntBASIC8.94□□□□□ -0.98
LINC01554Q52M75 RBM17P2-201ENST00000616397 1405 ntBASIC8.94□□□□□ -0.98
LINC01554Q52M75 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01554Q52M75 OR2I1P-209ENST00000641730 5365 ntBASIC8.94□□□□□ -0.98
LINC01554Q52M75 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01554Q52M75 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01554Q52M75 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01554Q52M75 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01554Q52M75 AC105917.1-201ENST00000506637 2539 ntBASIC8.94□□□□□ -0.98
LINC01554Q52M75 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC8.94□□□□□ -0.98
LINC01554Q52M75 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01554Q52M75 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01554Q52M75 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
LINC01554Q52M75 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01554Q52M75 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01554Q52M75 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LINC01554Q52M75 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC8.94□□□□□ -0.98
LINC01554Q52M75 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
LINC01554Q52M75 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms