RNA–Protein interactions for RNA: ENST00000399603.5

CACNA1C-209, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-209ENST00000399603 DCAF8L2P0C7V8 631 aa20.99■□□□□ 0.95
CACNA1C-209ENST00000399603 PELP1Q8IZL8 1130 aaKnown RBP20.68■□□□□ 0.9
CACNA1C-209ENST00000399603 ERICH6Q7L0X2 663 aa20.21■□□□□ 0.83
CACNA1C-209ENST00000399603 NISCHQ9Y2I1 1504 aa20.1■□□□□ 0.81
CACNA1C-209ENST00000399603 MYT1Q01538 1121 aa19.93■□□□□ 0.78
CACNA1C-209ENST00000399603 SUPT5HO00267 1087 aaKnown RBP19.88■□□□□ 0.77
CACNA1C-209ENST00000399603 EHMT2Q96KQ7 1210 aa19.85■□□□□ 0.77
CACNA1C-209ENST00000399603 CCER1Q8TC90 406 aaPredicted RBP19.74■□□□□ 0.75
CACNA1C-209ENST00000399603 SHROOM4Q9ULL8 1493 aa19.67■□□□□ 0.74
CACNA1C-209ENST00000399603 CENPBP07199 599 aaPredicted RBP19.3■□□□□ 0.68
CACNA1C-209ENST00000399603 TTBK1Q5TCY1 1321 aaPredicted RBP19.24■□□□□ 0.67
CACNA1C-209ENST00000399603 APLP2Q06481 763 aa19.21■□□□□ 0.67
CACNA1C-209ENST00000399603 NEFLP07196 543 aa19.1■□□□□ 0.65
CACNA1C-209ENST00000399603 YTHDC1Q96MU7 727 aaKnown RBP19.06■□□□□ 0.64
CACNA1C-209ENST00000399603 PCGF6Q9BYE7 350 aa19.05■□□□□ 0.64
CACNA1C-209ENST00000399603 DAXXQ9UER7 740 aaPredicted RBP19.01■□□□□ 0.63
CACNA1C-209ENST00000399603 FAM9AQ8IZU1 332 aaPredicted RBP18.78■□□□□ 0.6
CACNA1C-209ENST00000399603 RANGAP1P46060 587 aaPredicted RBP18.7■□□□□ 0.58
CACNA1C-209ENST00000399603 ATP1B4Q9UN42 357 aaPredicted RBP18.59■□□□□ 0.57
CACNA1C-209ENST00000399603 RTL5Q5HYW3 569 aaPredicted RBP18.54■□□□□ 0.56
CACNA1C-209ENST00000399603 ZNF316A6NFI3 1004 aaPredicted RBP18.49■□□□□ 0.55
CACNA1C-209ENST00000399603 ZEB1P37275 1124 aaPredicted RBP18.46■□□□□ 0.55
CACNA1C-209ENST00000399603 CNGB1Q14028 1251 aaPredicted RBP18.4■□□□□ 0.54
CACNA1C-209ENST00000399603 POLR3GLQ9BT43 218 aa18.4■□□□□ 0.54
CACNA1C-209ENST00000399603 CLSPNQ9HAW4 1339 aa18.34■□□□□ 0.53
CACNA1C-209ENST00000399603 TRIM41Q8WV44 630 aa18.3■□□□□ 0.52
CACNA1C-209ENST00000399603 EIF5BO60841 1220 aaKnown RBP18.14■□□□□ 0.49
CACNA1C-209ENST00000399603 SLC4A1APQ9BWU0 796 aaKnown RBP18.09■□□□□ 0.49
CACNA1C-209ENST00000399603 PPARGC1BQ86YN6 1023 aaKnown RBP18.05■□□□□ 0.48
CACNA1C-209ENST00000399603 UBTFP17480 764 aaKnown RBP18.05■□□□□ 0.48
CACNA1C-209ENST00000399603 CHIC1Q5VXU3 224 aa18.01■□□□□ 0.47
CACNA1C-209ENST00000399603 MYT1LQ9UL68 1186 aa18.01■□□□□ 0.47
CACNA1C-209ENST00000399603 BCL11AQ9H165 835 aa17.99■□□□□ 0.47
CACNA1C-209ENST00000399603 BCANQ96GW7 911 aa17.89■□□□□ 0.45
CACNA1C-209ENST00000399603 ITGAEP38570 1179 aa17.87■□□□□ 0.45
CACNA1C-209ENST00000399603 GLIPR1L2Q4G1C9 344 aa17.77■□□□□ 0.43
CACNA1C-209ENST00000399603 ZBTB47Q9UFB7 747 aaPredicted RBP17.76■□□□□ 0.43
CACNA1C-209ENST00000399603 HRCP23327 699 aa17.76■□□□□ 0.43
CACNA1C-209ENST00000399603 SLC24A1O60721 1099 aa17.68■□□□□ 0.42
CACNA1C-209ENST00000399603 LOC105371045A0A1W2PR82 267 aa17.66■□□□□ 0.42
CACNA1C-209ENST00000399603 CDK11AQ9UQ88 783 aaPredicted RBP17.65■□□□□ 0.42
CACNA1C-209ENST00000399603 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.64■□□□□ 0.41
CACNA1C-209ENST00000399603 HNRNPUL2Q1KMD3 747 aaKnown RBP17.64■□□□□ 0.41
CACNA1C-209ENST00000399603 PABPN1Q86U42 306 aaKnown RBP eCLIP17.59■□□□□ 0.41
CACNA1C-209ENST00000399603 ANP32BQ92688 251 aaKnown RBP17.59■□□□□ 0.41
CACNA1C-209ENST00000399603 NPM2Q86SE8 214 aaKnown RBP17.57■□□□□ 0.4
CACNA1C-209ENST00000399603 ABCC9O60706 1549 aa17.55■□□□□ 0.4
CACNA1C-209ENST00000399603 GTF3C3Q9Y5Q9 886 aa17.5■□□□□ 0.39
CACNA1C-209ENST00000399603 ARXQ96QS3 562 aa17.49■□□□□ 0.39
CACNA1C-209ENST00000399603 CANXP27824 592 aaKnown RBP17.49■□□□□ 0.39
CACNA1C-209ENST00000399603 DIEXFQ68CQ4 756 aaKnown RBP17.46■□□□□ 0.39
CACNA1C-209ENST00000399603 TRIM26Q12899 539 aaPredicted RBP17.45■□□□□ 0.38
CACNA1C-209ENST00000399603 ANP32AP39687 249 aaKnown RBP17.45■□□□□ 0.38
CACNA1C-209ENST00000399603 HSP90AA1P07900 732 aaKnown RBP17.39■□□□□ 0.37
CACNA1C-209ENST00000399603 NBR1Q14596 966 aa17.29■□□□□ 0.36
CACNA1C-209ENST00000399603 CDK11BP21127 795 aaKnown RBP17.27■□□□□ 0.36
CACNA1C-209ENST00000399603 AMER1Q5JTC6 1135 aaPredicted RBP17.23■□□□□ 0.35
CACNA1C-209ENST00000399603 ZNF326Q5BKZ1 582 aaKnown RBP17.21■□□□□ 0.35
CACNA1C-209ENST00000399603 NEUROD1Q13562 356 aa17.21■□□□□ 0.34
CACNA1C-209ENST00000399603 ANP32CO43423 234 aa17.17■□□□□ 0.34
CACNA1C-209ENST00000399603 TNNT2P45379 298 aaPredicted RBP17.15■□□□□ 0.34
CACNA1C-209ENST00000399603 TRIM52Q96A61 297 aa17.14■□□□□ 0.33
CACNA1C-209ENST00000399603 NEFMP07197 916 aa17.13■□□□□ 0.33
CACNA1C-209ENST00000399603 UPF2Q9HAU5 1272 aaKnown RBP17.07■□□□□ 0.32
CACNA1C-209ENST00000399603 FAM50AQ14320 339 aaKnown RBP17.05■□□□□ 0.32
CACNA1C-209ENST00000399603 TULP1O00294 542 aaPredicted RBP17.02■□□□□ 0.31
CACNA1C-209ENST00000399603 FBLN2P98095 1184 aa16.98■□□□□ 0.31
CACNA1C-209ENST00000399603 FKBP8Q14318 412 aa16.95■□□□□ 0.3
CACNA1C-209ENST00000399603 TRIM44Q96DX7 344 aaPredicted RBP16.95■□□□□ 0.3
CACNA1C-209ENST00000399603 ARID3CA6NKF2 412 aa16.92■□□□□ 0.3
CACNA1C-209ENST00000399603 NCBP3Q53F19 620 aaKnown RBP16.91■□□□□ 0.3
CACNA1C-209ENST00000399603 DNTTIP2Q5QJE6 756 aaKnown RBP16.9■□□□□ 0.3
CACNA1C-209ENST00000399603 P3H3Q8IVL6 736 aa16.9■□□□□ 0.3
CACNA1C-209ENST00000399603 TPRNQ4KMQ1 711 aa16.9■□□□□ 0.3
CACNA1C-209ENST00000399603 RTN4Q9NQC3 1192 aaKnown RBP16.88■□□□□ 0.29
CACNA1C-209ENST00000399603 SALL2Q9Y467 1007 aaPredicted RBP16.85■□□□□ 0.29
CACNA1C-209ENST00000399603 NAP1L5Q96NT1 182 aaPredicted RBP16.84■□□□□ 0.29
CACNA1C-209ENST00000399603 ACIN1Q9UKV3 1341 aaKnown RBP16.84■□□□□ 0.29
CACNA1C-209ENST00000399603 PTMAP06454 111 aaKnown RBP16.83■□□□□ 0.29
CACNA1C-209ENST00000399603 CSRNP3Q8WYN3 585 aa16.82■□□□□ 0.28
CACNA1C-209ENST00000399603 NCLP19338 710 aaKnown RBP16.8■□□□□ 0.28
CACNA1C-209ENST00000399603 SCRIBQ14160 1630 aa16.73■□□□□ 0.27
CACNA1C-209ENST00000399603 CCDC136Q96JN2 1154 aa16.72■□□□□ 0.27
CACNA1C-209ENST00000399603 ZRSR1Q15695 479 aaKnown RBP16.7■□□□□ 0.26
CACNA1C-209ENST00000399603 A0A0G2JS52 829 aa16.7■□□□□ 0.26
CACNA1C-209ENST00000399603 PLCB2Q00722 1185 aa16.68■□□□□ 0.26
CACNA1C-209ENST00000399603 FAM9BQ8IZU0 186 aa16.67■□□□□ 0.26
CACNA1C-209ENST00000399603 TAOK2Q9UL54 1235 aa16.67■□□□□ 0.26
CACNA1C-209ENST00000399603 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.67■□□□□ 0.26
CACNA1C-209ENST00000399603 ARID4BQ4LE39 1312 aaPredicted RBP16.66■□□□□ 0.26
CACNA1C-209ENST00000399603 HNRNPUQ00839 825 aaKnown RBP eCLIP16.66■□□□□ 0.26
CACNA1C-209ENST00000399603 ZCCHC6Q5VYS8 1495 aaKnown RBP16.65■□□□□ 0.26
CACNA1C-209ENST00000399603 ZNF777Q9ULD5 760 aaPredicted RBP16.64■□□□□ 0.25
CACNA1C-209ENST00000399603 PLPPR3Q6T4P5 718 aa16.62■□□□□ 0.25
CACNA1C-209ENST00000399603 IRX6P78412 446 aaPredicted RBP16.62■□□□□ 0.25
CACNA1C-209ENST00000399603 GOLGA6L22H0YM25 854 aa16.61■□□□□ 0.25
CACNA1C-209ENST00000399603 ERICH6BQ5W0A0 696 aa16.58■□□□□ 0.25
CACNA1C-209ENST00000399603 ARID3AQ99856 593 aa16.57■□□□□ 0.24
CACNA1C-209ENST00000399603 BECN1Q14457 450 aa16.54■□□□□ 0.24
CACNA1C-209ENST00000399603 MYH16Q9H6N6 1097 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms