Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 BTF3-201ENST00000335895 897 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.152e-9■■■□□ 16.7
RPS3P23396 BTF3-209ENST00000514505 740 ntTSL 55.78□□□□□ -1.482e-9■■■□□ 16.7
RPS3P23396 BTF3-208ENST00000514360 1177 ntTSL 25.7□□□□□ -1.52e-9■■■□□ 16.7
RPS3P23396 BTF3-203ENST00000507081 377 ntTSL 55.36□□□□□ -1.552e-9■■■□□ 16.7
RPS3P23396 BTF3-204ENST00000508901 954 ntTSL 24.23□□□□□ -1.732e-9■■■□□ 16.7
RPS3P23396 BTF3-205ENST00000509708 515 ntTSL 52.54□□□□□ -22e-9■■■□□ 16.7
RPS3P23396 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.031e-6■■■□□ 16.7
RPS3P23396 LMNB1-203ENST00000460265 3475 ntTSL 1 (best)14.89□□□□□ -0.031e-6■■■□□ 16.7
RPS3P23396 LMNB1-208ENST00000504788 1801 ntTSL 24.88□□□□□ -1.631e-6■■■□□ 16.7
RPS3P23396 PIPOX-208ENST00000580241 1772 ntTSL 519.66■□□□□ 0.743e-6■■■□□ 16.7
RPS3P23396 PIPOX-210ENST00000583215 1829 ntTSL 518.4■□□□□ 0.543e-6■■■□□ 16.7
RPS3P23396 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.143e-6■■■□□ 16.7
RPS3P23396 PPP4C-209ENST00000566749 1490 ntTSL 524■■□□□ 1.439e-7■■■□□ 16.7
RPS3P23396 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.369e-7■■■□□ 16.7
RPS3P23396 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC22.64■■□□□ 1.229e-7■■■□□ 16.7
RPS3P23396 PPP4C-204ENST00000562664 941 ntTSL 322.64■■□□□ 1.219e-7■■■□□ 16.7
RPS3P23396 PPP4C-205ENST00000563200 1447 ntTSL 521.07■□□□□ 0.969e-7■■■□□ 16.7
RPS3P23396 RHOA-203ENST00000422781 961 ntTSL 2 BASIC10.24□□□□□ -0.775e-7■■■□□ 16.7
RPS3P23396 LDHA-208ENST00000469976 656 ntTSL 211.15□□□□□ -0.621e-24■■■□□ 16.7
RPS3P23396 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.36■■□□□ 1.011e-6■■■□□ 16.7
RPS3P23396 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.881e-6■■■□□ 16.7
RPS3P23396 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.49■□□□□ 0.391e-6■■■□□ 16.7
RPS3P23396 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.28■□□□□ 0.361e-6■■■□□ 16.7
RPS3P23396 HSPA9-204ENST00000504902 887 ntTSL 514.27□□□□□ -0.136e-8■■■□□ 16.7
RPS3P23396 LRP1-211ENST00000556356 5114 ntTSL 214.8□□□□□ -0.047e-7■■■□□ 16.7
RPS3P23396 EIF3D-212ENST00000496875 604 ntTSL 48.62□□□□□ -1.031e-7■■■□□ 16.7
RPS3P23396 SNRNP40-201ENST00000263694 1597 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.874e-9■■■□□ 16.7
RPS3P23396 CLU-213ENST00000522502 594 ntTSL 29.59□□□□□ -0.874e-13■■■□□ 16.7
RPS3P23396 CAP1-218ENST00000479759 888 ntTSL 53.03□□□□□ -1.928e-7■■■□□ 16.7
RPS3P23396 EIF3M-212ENST00000532444 633 ntTSL 515.75■□□□□ 0.115e-7■■■□□ 16.7
RPS3P23396 EIF3M-207ENST00000530026 769 ntTSL 24.17□□□□□ -1.745e-7■■■□□ 16.7
RPS3P23396 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC12.66□□□□□ -0.385e-7■■■□□ 16.7
RPS3P23396 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC12.45□□□□□ -0.425e-7■■■□□ 16.7
RPS3P23396 MSH6-215ENST00000622629 4324 ntTSL 5 BASIC12.39□□□□□ -0.435e-7■■■□□ 16.7
RPS3P23396 MSH6-213ENST00000614496 4150 ntTSL 1 (best) BASIC12.08□□□□□ -0.485e-7■■■□□ 16.7
RPS3P23396 MSH6-204ENST00000445503 4158 ntTSL 1 (best)11.44□□□□□ -0.585e-7■■■□□ 16.7
RPS3P23396 MSH6-201ENST00000234420 7476 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.655e-7■■■□□ 16.7
RPS3P23396 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC6.84□□□□□ -1.325e-7■■■□□ 16.7
RPS3P23396 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.879e-9■■■□□ 16.7
RPS3P23396 ERGIC3-217ENST00000488935 389 ntTSL 215.15■□□□□ 0.021e-7■■■□□ 16.7
RPS3P23396 SLC38A3-203ENST00000439524 424 ntTSL 311.39□□□□□ -0.599e-7■■■□□ 16.7
RPS3P23396 TOR3A-206ENST00000483887 1084 ntTSL 318.99■□□□□ 0.633e-7■■■□□ 16.7
RPS3P23396 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.373e-7■■■□□ 16.7
RPS3P23396 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.11■□□□□ 0.333e-7■■■□□ 16.7
RPS3P23396 TOR3A-205ENST00000472001 656 ntTSL 316.47■□□□□ 0.233e-7■■■□□ 16.7
RPS3P23396 TOR3A-202ENST00000367625 519 ntTSL 315.53■□□□□ 0.083e-7■■■□□ 16.7
RPS3P23396 GTF3C1-201ENST00000356183 7018 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.672e-6■■■□□ 16.7
RPS3P23396 GTF3C1-202ENST00000561623 7015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.812e-6■■■□□ 16.7
RPS3P23396 AL365226.2-201ENST00000418403 397 ntTSL 2 BASIC9.27□□□□□ -0.934e-7■■■□□ 16.7
RPS3P23396 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.122e-6■■■□□ 16.7
RPS3P23396 HK2-203ENST00000472302 395 ntTSL 33.9□□□□□ -1.791e-11■■■□□ 16.7
RPS3P23396 TXNRD2-220ENST00000634537 1086 ntTSL 517.86■□□□□ 0.456e-13■■■□□ 16.7
RPS3P23396 TXNRD2-215ENST00000494454 2004 ntTSL 1 (best)15.68■□□□□ 0.16e-13■■■□□ 16.7
RPS3P23396 TXNRD2-210ENST00000475995 751 ntTSL 515.01□□□□□ -0.016e-13■■■□□ 16.7
RPS3P23396 TXNRD2-221ENST00000635155 858 ntTSL 513.03□□□□□ -0.326e-13■■■□□ 16.7
RPS3P23396 ACAT2-203ENST00000472052 1641 ntTSL 29.55□□□□□ -0.885e-11■■■□□ 16.7
RPS3P23396 LAMB1-203ENST00000393560 2806 ntTSL 1 (best) BASIC11.23□□□□□ -0.611e-7■■■□□ 16.6
RPS3P23396 AHCY-203ENST00000473516 488 ntTSL 312.19□□□□□ -0.462e-9■■■□□ 16.6
RPS3P23396 DAZAP2-206ENST00000549041 598 ntTSL 21.35□□□□□ -2.196e-12■■■□□ 16.6
RPS3P23396 ASNS-216ENST00000487714 689 ntTSL 25.56□□□□□ -1.527e-11■■■□□ 16.6
RPS3P23396 G3BP1-212ENST00000522761 1763 ntTSL 216.94■□□□□ 0.31e-6■■■□□ 16.6
RPS3P23396 G3BP1-208ENST00000520177 2700 ntTSL 1 (best)14.38□□□□□ -0.111e-6■■■□□ 16.6
RPS3P23396 G3BP1-201ENST00000356245 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.541e-6■■■□□ 16.6
RPS3P23396 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.531e-6■■■□□ 16.6
RPS3P23396 TRIM28-204ENST00000594806 861 ntTSL 525.26■■□□□ 1.634e-21■■■□□ 16.6
RPS3P23396 TRIM28-203ENST00000593582 533 ntTSL 314.79□□□□□ -0.044e-21■■■□□ 16.6
RPS3P23396 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.53■□□□□ 0.723e-10■■■□□ 16.6
RPS3P23396 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.34■□□□□ 0.213e-10■■■□□ 16.6
RPS3P23396 CFL1-206ENST00000527344 962 ntTSL 2 BASIC13.03□□□□□ -0.323e-10■■■□□ 16.6
RPS3P23396 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.135e-10■■■□□ 16.6
RPS3P23396 DARS-203ENST00000435076 717 ntTSL 211.64□□□□□ -0.556e-13■■■□□ 16.6
RPS3P23396 DARS-206ENST00000456565 731 ntTSL 38.45□□□□□ -1.066e-13■■■□□ 16.6
RPS3P23396 DARS-204ENST00000441323 651 ntTSL 37.65□□□□□ -1.186e-13■■■□□ 16.6
RPS3P23396 DARS-205ENST00000449218 543 ntTSL 36.75□□□□□ -1.336e-13■■■□□ 16.6
RPS3P23396 DARS-207ENST00000463008 412 ntTSL 53.55□□□□□ -1.846e-13■■■□□ 16.6
RPS3P23396 MBOAT7-209ENST00000464098 493 ntTSL 214□□□□□ -0.173e-6■■■□□ 16.6
RPS3P23396 QARS-252ENST00000637908 637 ntTSL 515.36■□□□□ 0.054e-12■■■□□ 16.6
RPS3P23396 PGD-209ENST00000496718 506 ntTSL 212.64□□□□□ -0.391e-7■■■□□ 16.6
RPS3P23396 ALB-212ENST00000507673 262 ntTSL 24.54□□□□□ -1.681e-323■■■□□ 16.6
RPS3P23396 CPED1-207ENST00000466055 543 ntTSL 35.53□□□□□ -1.524e-7■■■□□ 16.6
RPS3P23396 NDUFS6-203ENST00000510329 260 ntTSL 320.6■□□□□ 0.897e-25■■■□□ 16.6
RPS3P23396 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.815e-11■■■□□ 16.6
RPS3P23396 SPTAN1-235ENST00000637434 1496 ntTSL 511.92□□□□□ -0.52e-7■■■□□ 16.6
RPS3P23396 P4HB-216ENST00000571617 505 ntTSL 320.3■□□□□ 0.843e-21■■■□□ 16.6
RPS3P23396 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.554e-8■■■□□ 16.6
RPS3P23396 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC12.11□□□□□ -0.472e-8■■■□□ 16.6
RPS3P23396 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.14■□□□□ 0.653e-21■■■□□ 16.6
RPS3P23396 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.47■□□□□ 0.071e-7■■■□□ 16.6
RPS3P23396 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.04□□□□□ -1.63e-11■■■□□ 16.6
RPS3P23396 G3BP1-203ENST00000507878 577 ntTSL 411.19□□□□□ -0.622e-6■■■□□ 16.6
RPS3P23396 RHOA-201ENST00000265538 388 ntTSL 418.21■□□□□ 0.511e-27■■■□□ 16.6
RPS3P23396 SERF2-215ENST00000475927 692 ntTSL 212.8□□□□□ -0.364e-23■■■□□ 16.6
RPS3P23396 ADPGK-205ENST00000562823 514 ntTSL 420.6■□□□□ 0.895e-10■■■□□ 16.6
RPS3P23396 ADPGK-211ENST00000569058 575 ntTSL 418.64■□□□□ 0.575e-10■■■□□ 16.6
RPS3P23396 ADPGK-203ENST00000562286 556 ntTSL 418.49■□□□□ 0.555e-10■■■□□ 16.6
RPS3P23396 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.78■□□□□ 0.283e-10■■■□□ 16.6
RPS3P23396 PROC-209ENST00000464089 563 ntTSL 416.68■□□□□ 0.263e-10■■■□□ 16.6
RPS3P23396 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.59■□□□□ 0.253e-10■■■□□ 16.6
RPS3P23396 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.072e-6■■■□□ 16.6
RPS3P23396 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.24□□□□□ -0.133e-10■■■□□ 16.6
Retrieved 100 of 24,271 protein–RNA pairs in 214.6 ms