Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 PXN-203ENST00000323871 5457 ntTSL 219.68■□□□□ 0.745e-9■□□□□ 8.6
SND1Q7KZF4 CTNNA1-213ENST00000519113 859 ntTSL 319.67■□□□□ 0.747e-7■□□□□ 8.6
SND1Q7KZF4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.61■□□□□ 0.737e-7■□□□□ 8.6
SND1Q7KZF4 CLN6-213ENST00000636212 1053 ntTSL 519.61■□□□□ 0.737e-7■□□□□ 8.6
SND1Q7KZF4 HNRNPM-213ENST00000600092 1086 ntTSL 219.19■□□□□ 0.663e-7■□□□□ 8.6
SND1Q7KZF4 CLN6-220ENST00000637450 868 ntTSL 319.04■□□□□ 0.647e-7■□□□□ 8.6
SND1Q7KZF4 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.04■□□□□ 0.647e-7■□□□□ 8.6
SND1Q7KZF4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.97■□□□□ 0.637e-7■□□□□ 8.6
SND1Q7KZF4 CLN6-210ENST00000635747 1181 ntTSL 518.89■□□□□ 0.617e-7■□□□□ 8.6
SND1Q7KZF4 AC107871.1-203ENST00000637054 3238 ntTSL 518.87■□□□□ 0.617e-7■□□□□ 8.6
SND1Q7KZF4 AC107871.1-201ENST00000637888 2941 ntTSL 518.7■□□□□ 0.587e-7■□□□□ 8.6
SND1Q7KZF4 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.511e-19■□□□□ 8.6
SND1Q7KZF4 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.487e-7■□□□□ 8.6
SND1Q7KZF4 CLN6-218ENST00000637223 652 ntTSL 517.86■□□□□ 0.457e-7■□□□□ 8.6
SND1Q7KZF4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.84■□□□□ 0.457e-7■□□□□ 8.6
SND1Q7KZF4 CTNNA1-206ENST00000517980 696 ntTSL 417.83■□□□□ 0.447e-7■□□□□ 8.6
SND1Q7KZF4 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.425e-9■□□□□ 8.6
SND1Q7KZF4 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.385e-9■□□□□ 8.6
SND1Q7KZF4 CLN6-208ENST00000567060 945 ntTSL 217.39■□□□□ 0.377e-7■□□□□ 8.6
SND1Q7KZF4 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.331e-19■□□□□ 8.6
SND1Q7KZF4 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.06■□□□□ 0.324e-6■□□□□ 8.6
SND1Q7KZF4 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.231e-19■□□□□ 8.6
SND1Q7KZF4 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.227e-7■□□□□ 8.6
SND1Q7KZF4 G6PD-205ENST00000439227 1074 ntTSL 516.36■□□□□ 0.217e-7■□□□□ 8.6
SND1Q7KZF4 CLN6-215ENST00000636674 2005 ntTSL 516.09■□□□□ 0.177e-7■□□□□ 8.6
SND1Q7KZF4 TMEM173-205ENST00000503838 595 ntTSL 516■□□□□ 0.151e-11■□□□□ 8.6
SND1Q7KZF4 CLN6-219ENST00000637329 1204 ntTSL 515.98■□□□□ 0.157e-7■□□□□ 8.6
SND1Q7KZF4 G6PD-204ENST00000433845 817 ntTSL 315.68■□□□□ 0.17e-7■□□□□ 8.6
SND1Q7KZF4 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.03■□□□□ -07e-7■□□□□ 8.6
SND1Q7KZF4 PSMB5-206ENST00000555895 444 ntTSL 314.69□□□□□ -0.067e-7■□□□□ 8.6
SND1Q7KZF4 PSMB7-206ENST00000498485 967 ntTSL 514.67□□□□□ -0.067e-7■□□□□ 8.6
SND1Q7KZF4 HNRNPM-215ENST00000601645 832 ntTSL 314.62□□□□□ -0.073e-7■□□□□ 8.6
SND1Q7KZF4 G6PD-206ENST00000440967 1056 ntTSL 514.4□□□□□ -0.17e-7■□□□□ 8.6
SND1Q7KZF4 DHX9-202ENST00000473076 1378 ntTSL 1 (best)14.08□□□□□ -0.161e-8■□□□□ 8.6
SND1Q7KZF4 PXN-204ENST00000424649 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.165e-9■□□□□ 8.6
SND1Q7KZF4 GLUL-204ENST00000417584 4065 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.171e-19■□□□□ 8.6
SND1Q7KZF4 CD37-209ENST00000596426 600 ntTSL 413.93□□□□□ -0.188e-7■□□□□ 8.6
SND1Q7KZF4 CD37-205ENST00000593512 618 ntTSL 413.83□□□□□ -0.28e-7■□□□□ 8.6
SND1Q7KZF4 PXN-222ENST00000637624 4132 ntTSL 213.77□□□□□ -0.215e-9■□□□□ 8.6
SND1Q7KZF4 SFPQ-201ENST00000357214 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.235e-9■□□□□ 8.6
SND1Q7KZF4 CLN6-225ENST00000638144 576 ntTSL 512.94□□□□□ -0.347e-7■□□□□ 8.6
SND1Q7KZF4 CTNNA1-211ENST00000518910 572 ntTSL 412.72□□□□□ -0.377e-7■□□□□ 8.6
SND1Q7KZF4 RAE1-207ENST00000462438 3251 ntTSL 212.5□□□□□ -0.417e-7■□□□□ 8.6
SND1Q7KZF4 CLN6-217ENST00000636964 3335 ntTSL 212.31□□□□□ -0.447e-7■□□□□ 8.6
SND1Q7KZF4 CLN6-223ENST00000637823 717 ntTSL 512.27□□□□□ -0.457e-7■□□□□ 8.6
SND1Q7KZF4 PXN-202ENST00000267257 3835 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.55e-9■□□□□ 8.6
SND1Q7KZF4 PXN-206ENST00000458477 3807 ntTSL 1 (best) BASIC11.94□□□□□ -0.55e-9■□□□□ 8.6
SND1Q7KZF4 CTNNA1-234ENST00000522227 642 ntTSL 311.51□□□□□ -0.577e-7■□□□□ 8.6
SND1Q7KZF4 AIMP1-201ENST00000358008 2412 ntAPPRIS P3 TSL 2 BASIC11.36□□□□□ -0.597e-7■□□□□ 8.6
SND1Q7KZF4 GLUL-212ENST00000491322 6132 ntTSL 1 (best)10.87□□□□□ -0.671e-19■□□□□ 8.6
SND1Q7KZF4 CTNNA1-230ENST00000521724 2741 ntTSL 210.8□□□□□ -0.687e-7■□□□□ 8.6
SND1Q7KZF4 GLUL-207ENST00000463851 939 ntTSL 310.48□□□□□ -0.731e-19■□□□□ 8.6
SND1Q7KZF4 GLUL-209ENST00000480604 908 ntTSL 510.44□□□□□ -0.741e-19■□□□□ 8.6
SND1Q7KZF4 PSMB7-201ENST00000259457 980 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.747e-7■□□□□ 8.6
SND1Q7KZF4 GLUL-211ENST00000489818 683 ntTSL 310.37□□□□□ -0.751e-19■□□□□ 8.6
SND1Q7KZF4 HNRNPM-210ENST00000598367 298 ntTSL 510.33□□□□□ -0.763e-7■□□□□ 8.6
SND1Q7KZF4 HADHB-204ENST00000425035 696 ntTSL 410.18□□□□□ -0.787e-7■□□□□ 8.6
SND1Q7KZF4 CLN6-203ENST00000563917 557 ntTSL 59.87□□□□□ -0.837e-7■□□□□ 8.6
SND1Q7KZF4 CTNNA1-210ENST00000518825 3536 ntTSL 1 (best) BASIC9.33□□□□□ -0.927e-7■□□□□ 8.6
SND1Q7KZF4 GLUL-206ENST00000462444 793 ntTSL 29.25□□□□□ -0.931e-19■□□□□ 8.6
SND1Q7KZF4 CTNNA1-240ENST00000523912 545 ntTSL 49.16□□□□□ -0.947e-7■□□□□ 8.6
SND1Q7KZF4 GLUL-208ENST00000475808 868 ntTSL 29.13□□□□□ -0.951e-19■□□□□ 8.6
SND1Q7KZF4 CTNNA1-215ENST00000519309 869 ntTSL 38.73□□□□□ -1.017e-7■□□□□ 8.6
SND1Q7KZF4 KPNA6-204ENST00000471599 3941 ntTSL 28.68□□□□□ -1.027e-7■□□□□ 8.6
SND1Q7KZF4 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.037e-7■□□□□ 8.6
SND1Q7KZF4 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.097e-7■□□□□ 8.6
SND1Q7KZF4 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.94□□□□□ -1.147e-7■□□□□ 8.6
SND1Q7KZF4 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.8□□□□□ -1.167e-7■□□□□ 8.6
SND1Q7KZF4 RRM2-207ENST00000485717 573 ntTSL 1 (best)7.69□□□□□ -1.187e-7■□□□□ 8.6
SND1Q7KZF4 KPNA6-203ENST00000469790 879 ntTSL 27.59□□□□□ -1.197e-7■□□□□ 8.6
SND1Q7KZF4 PSMB7-204ENST00000474081 546 ntTSL 56.77□□□□□ -1.337e-7■□□□□ 8.6
SND1Q7KZF4 KPNA6-202ENST00000446515 965 ntTSL 36.71□□□□□ -1.347e-7■□□□□ 8.6
SND1Q7KZF4 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.377e-7■□□□□ 8.6
SND1Q7KZF4 RRM1-213ENST00000533495 2381 ntTSL 26.48□□□□□ -1.374e-6■□□□□ 8.6
SND1Q7KZF4 PSMB7-205ENST00000478817 388 ntTSL 56.21□□□□□ -1.427e-7■□□□□ 8.6
SND1Q7KZF4 HADHB-205ENST00000448743 557 ntTSL 56.09□□□□□ -1.437e-7■□□□□ 8.6
SND1Q7KZF4 NUP205-210ENST00000607647 4518 ntTSL 55.93□□□□□ -1.467e-7■□□□□ 8.6
SND1Q7KZF4 CTNNA1-219ENST00000520158 719 ntTSL 35.9□□□□□ -1.467e-7■□□□□ 8.6
SND1Q7KZF4 CTNNA1-209ENST00000518585 568 ntTSL 44.42□□□□□ -1.77e-7■□□□□ 8.6
SND1Q7KZF4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.847e-7■□□□□ 8.6
SND1Q7KZF4 MCM7-209ENST00000485286 2900 ntTSL 220.05■□□□□ 0.86e-7■□□□□ 8.6
SND1Q7KZF4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.1■□□□□ 0.656e-7■□□□□ 8.6
SND1Q7KZF4 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.4■□□□□ 0.226e-7■□□□□ 8.6
SND1Q7KZF4 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC14.4□□□□□ -0.16e-7■□□□□ 8.6
SND1Q7KZF4 MCM7-201ENST00000303887 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.266e-7■□□□□ 8.6
SND1Q7KZF4 MCM7-210ENST00000489841 2515 ntTSL 1 (best)11.19□□□□□ -0.626e-7■□□□□ 8.6
SND1Q7KZF4 ADH5-212ENST00000512991 880 ntTSL 511.11□□□□□ -0.634e-6■□□□□ 8.6
SND1Q7KZF4 ADH5-203ENST00000502590 697 ntTSL 510.23□□□□□ -0.774e-6■□□□□ 8.6
SND1Q7KZF4 ADH5-204ENST00000503130 786 ntTSL 310.22□□□□□ -0.774e-6■□□□□ 8.6
SND1Q7KZF4 ADH5-208ENST00000508511 1909 ntTSL 29.45□□□□□ -0.94e-6■□□□□ 8.6
SND1Q7KZF4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.771e-6■□□□□ 8.6
SND1Q7KZF4 MINOS1-NBL1-202ENST00000602384 999 ntTSL 518.43■□□□□ 0.541e-6■□□□□ 8.6
SND1Q7KZF4 MINOS1-NBL1-203ENST00000602450 590 ntTSL 218.17■□□□□ 0.51e-6■□□□□ 8.6
SND1Q7KZF4 MINOS1-NBL1-201ENST00000602293 820 ntTSL 315.68■□□□□ 0.11e-6■□□□□ 8.6
SND1Q7KZF4 MINOS1-209ENST00000498642 669 ntTSL 215.48■□□□□ 0.071e-6■□□□□ 8.6
SND1Q7KZF4 MINOS1-203ENST00000467029 583 ntTSL 214.65□□□□□ -0.061e-6■□□□□ 8.6
SND1Q7KZF4 MINOS1-205ENST00000481464 657 ntTSL 314.49□□□□□ -0.091e-6■□□□□ 8.6
SND1Q7KZF4 MINOS1-207ENST00000486890 677 ntTSL 312.55□□□□□ -0.41e-6■□□□□ 8.6
SND1Q7KZF4 MINOS1-201ENST00000322753 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.51e-6■□□□□ 8.6
SND1Q7KZF4 MINOS1-210ENST00000617872 3678 ntTSL 2 BASIC11.9□□□□□ -0.51e-6■□□□□ 8.6
Retrieved 100 of 13,567 protein–RNA pairs in 248.7 ms