RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 NISCHQ9Y2I1 1504 aa15.51■□□□□ 0.07
CTNNA1-244ENST00000627109 CCDC180Q9P1Z9 1646 aa13.46□□□□□ -0.25
CTNNA1-244ENST00000627109 ZCCHC6Q5VYS8 1495 aaKnown RBP13.16□□□□□ -0.3
CTNNA1-244ENST00000627109 DCAF8L2P0C7V8 631 aa13.1□□□□□ -0.31
CTNNA1-244ENST00000627109 DCAF1Q9Y4B6 1507 aa12.95□□□□□ -0.34
CTNNA1-244ENST00000627109 ABCC9O60706 1549 aa12.88□□□□□ -0.35
CTNNA1-244ENST00000627109 MYO15BQ96JP2 1530 aa12.65□□□□□ -0.38
CTNNA1-244ENST00000627109 SHROOM4Q9ULL8 1493 aa12.63□□□□□ -0.39
CTNNA1-244ENST00000627109 NACADO15069 1562 aa12.32□□□□□ -0.44
CTNNA1-244ENST00000627109 SUPT5HO00267 1087 aaKnown RBP12.31□□□□□ -0.44
CTNNA1-244ENST00000627109 PABPN1Q86U42 306 aaKnown RBP eCLIP12.29□□□□□ -0.44
CTNNA1-244ENST00000627109 SCRIBQ14160 1630 aa12.23□□□□□ -0.45
CTNNA1-244ENST00000627109 CHIC1Q5VXU3 224 aa12.2□□□□□ -0.46
CTNNA1-244ENST00000627109 RSF1Q96T23 1441 aaPredicted RBP12.15□□□□□ -0.46
CTNNA1-244ENST00000627109 RB1CC1Q8TDY2 1594 aa12.14□□□□□ -0.47
CTNNA1-244ENST00000627109 SLC24A1O60721 1099 aa12.08□□□□□ -0.48
CTNNA1-244ENST00000627109 UNC13AQ9UPW8 1703 aa12.03□□□□□ -0.48
CTNNA1-244ENST00000627109 BAZ1AQ9NRL2 1556 aaPredicted RBP11.98□□□□□ -0.49
CTNNA1-244ENST00000627109 EIF4G1Q04637 1599 aaKnown RBP11.98□□□□□ -0.49
CTNNA1-244ENST00000627109 MROH2BQ7Z745 1585 aa11.97□□□□□ -0.49
CTNNA1-244ENST00000627109 CECR2Q9BXF3 1484 aa11.94□□□□□ -0.5
CTNNA1-244ENST00000627109 EHMT2Q96KQ7 1210 aa11.94□□□□□ -0.5
CTNNA1-244ENST00000627109 WIZO95785 1651 aa11.92□□□□□ -0.5
CTNNA1-244ENST00000627109 SMARCA4P51532 1647 aa11.86□□□□□ -0.51
CTNNA1-244ENST00000627109 TOP2AP11388 1531 aaKnown RBP11.83□□□□□ -0.52
CTNNA1-244ENST00000627109 PEG3Q9GZU2 1588 aa11.8□□□□□ -0.52
CTNNA1-244ENST00000627109 BICRAQ9NZM4 1560 aa11.8□□□□□ -0.52
CTNNA1-244ENST00000627109 SMARCA2P51531 1590 aa11.75□□□□□ -0.53
CTNNA1-244ENST00000627109 AEBP2Q6ZN18 517 aaPredicted RBP11.74□□□□□ -0.53
CTNNA1-244ENST00000627109 DNAJC5BQ9UF47 199 aa11.7□□□□□ -0.54
CTNNA1-244ENST00000627109 HRCP23327 699 aa11.68□□□□□ -0.54
CTNNA1-244ENST00000627109 CCDC88BA6NC98 1476 aa11.65□□□□□ -0.55
CTNNA1-244ENST00000627109 LOC105371045A0A1W2PR82 267 aa11.64□□□□□ -0.55
CTNNA1-244ENST00000627109 TRIM41Q8WV44 630 aa11.6□□□□□ -0.55
CTNNA1-244ENST00000627109 PCGF6Q9BYE7 350 aa11.55□□□□□ -0.56
CTNNA1-244ENST00000627109 TRIM26Q12899 539 aaPredicted RBP11.52□□□□□ -0.57
CTNNA1-244ENST00000627109 ABCC8Q09428 1581 aa11.52□□□□□ -0.57
CTNNA1-244ENST00000627109 EEA1Q15075 1411 aa11.49□□□□□ -0.57
CTNNA1-244ENST00000627109 ATAD2BQ9ULI0 1458 aa11.49□□□□□ -0.57
CTNNA1-244ENST00000627109 WRNQ14191 1432 aaPredicted RBP eCLIP11.46□□□□□ -0.58
CTNNA1-244ENST00000627109 HMGXB3Q12766 1538 aa11.43□□□□□ -0.58
CTNNA1-244ENST00000627109 KIF21BO75037 1637 aa11.42□□□□□ -0.58
CTNNA1-244ENST00000627109 SYNJ1O43426 1573 aa11.41□□□□□ -0.58
CTNNA1-244ENST00000627109 BIVM-ERCC5R4GMW8 1640 aa11.41□□□□□ -0.58
CTNNA1-244ENST00000627109 FAM9AQ8IZU1 332 aaPredicted RBP11.4□□□□□ -0.58
CTNNA1-244ENST00000627109 CC2D2AQ9P2K1 1620 aa11.39□□□□□ -0.59
CTNNA1-244ENST00000627109 BAZ1BQ9UIG0 1483 aaKnown RBP11.38□□□□□ -0.59
CTNNA1-244ENST00000627109 PRDM2Q13029 1718 aa11.38□□□□□ -0.59
CTNNA1-244ENST00000627109 TNIKQ9UKE5 1360 aa11.37□□□□□ -0.59
CTNNA1-244ENST00000627109 TOP2BQ02880 1626 aa11.36□□□□□ -0.59
CTNNA1-244ENST00000627109 SOGA1O94964 1423 aa11.35□□□□□ -0.59
CTNNA1-244ENST00000627109 NCAPD3P42695 1498 aa11.34□□□□□ -0.59
CTNNA1-244ENST00000627109 RUSC2Q8N2Y8 1516 aa11.31□□□□□ -0.6
CTNNA1-244ENST00000627109 GOLGA3Q08378 1498 aa11.31□□□□□ -0.6
CTNNA1-244ENST00000627109 CEP162Q5TB80 1403 aa11.3□□□□□ -0.6
CTNNA1-244ENST00000627109 ZEB1P37275 1124 aaPredicted RBP11.28□□□□□ -0.6
CTNNA1-244ENST00000627109 PPARGC1BQ86YN6 1023 aaKnown RBP11.27□□□□□ -0.61
CTNNA1-244ENST00000627109 CEP164Q9UPV0 1460 aa11.27□□□□□ -0.61
CTNNA1-244ENST00000627109 PLPPR3Q6T4P5 718 aa11.24□□□□□ -0.61
CTNNA1-244ENST00000627109 ERICH3Q5RHP9 1530 aa11.24□□□□□ -0.61
CTNNA1-244ENST00000627109 CSRNP3Q8WYN3 585 aa11.23□□□□□ -0.61
CTNNA1-244ENST00000627109 CFTRP13569 1480 aa11.21□□□□□ -0.62
CTNNA1-244ENST00000627109 CUX1P39880 1505 aa11.18□□□□□ -0.62
CTNNA1-244ENST00000627109 PRXQ9BXM0 1461 aa11.17□□□□□ -0.62
CTNNA1-244ENST00000627109 RAPGEF2Q9Y4G8 1499 aa11.13□□□□□ -0.63
CTNNA1-244ENST00000627109 ERCC6Q03468 1493 aa11.12□□□□□ -0.63
CTNNA1-244ENST00000627109 NESP48681 1621 aa11.12□□□□□ -0.63
CTNNA1-244ENST00000627109 VPS8Q8N3P4 1428 aa11.11□□□□□ -0.63
CTNNA1-244ENST00000627109 CADPSQ9ULU8 1353 aa11.1□□□□□ -0.63
CTNNA1-244ENST00000627109 TTBK1Q5TCY1 1321 aaPredicted RBP11.08□□□□□ -0.64
CTNNA1-244ENST00000627109 CLIP1P30622 1438 aa11.08□□□□□ -0.64
CTNNA1-244ENST00000627109 RTN4Q9NQC3 1192 aaKnown RBP11.04□□□□□ -0.64
CTNNA1-244ENST00000627109 ARAP1Q96P48 1450 aa11.04□□□□□ -0.64
CTNNA1-244ENST00000627109 PDS5BQ9NTI5 1447 aa11.02□□□□□ -0.65
CTNNA1-244ENST00000627109 KIF27Q86VH2 1401 aa11.01□□□□□ -0.65
CTNNA1-244ENST00000627109 WDR97A6NE52 1622 aa10.99□□□□□ -0.65
CTNNA1-244ENST00000627109 MAP3K1Q13233 1512 aa10.98□□□□□ -0.65
CTNNA1-244ENST00000627109 UBTFP17480 764 aaKnown RBP10.97□□□□□ -0.65
CTNNA1-244ENST00000627109 DNMBPQ6XZF7 1577 aa10.96□□□□□ -0.66
CTNNA1-244ENST00000627109 FANCD2Q9BXW9 1451 aa10.95□□□□□ -0.66
CTNNA1-244ENST00000627109 CUX2O14529 1486 aa10.94□□□□□ -0.66
CTNNA1-244ENST00000627109 ARHGAP35Q9NRY4 1499 aa10.93□□□□□ -0.66
CTNNA1-244ENST00000627109 FBLN2P98095 1184 aa10.93□□□□□ -0.66
CTNNA1-244ENST00000627109 FGD5Q6ZNL6 1462 aa10.92□□□□□ -0.66
CTNNA1-244ENST00000627109 RRBP1Q9P2E9 1410 aaKnown RBP10.92□□□□□ -0.66
CTNNA1-244ENST00000627109 CFAP43Q8NDM7 1665 aa10.92□□□□□ -0.66
CTNNA1-244ENST00000627109 CUL7Q14999 1698 aa10.92□□□□□ -0.66
CTNNA1-244ENST00000627109 LAMC3Q9Y6N6 1575 aa10.91□□□□□ -0.66
CTNNA1-244ENST00000627109 ABCA10Q8WWZ4 1543 aa10.91□□□□□ -0.66
CTNNA1-244ENST00000627109 IGF1RP08069 1367 aa10.9□□□□□ -0.66
CTNNA1-244ENST00000627109 CTTNBP2Q8WZ74 1663 aa10.89□□□□□ -0.67
CTNNA1-244ENST00000627109 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.89□□□□□ -0.67
CTNNA1-244ENST00000627109 PRKCSHP14314 528 aaPredicted RBP10.88□□□□□ -0.67
CTNNA1-244ENST00000627109 CCER1Q8TC90 406 aaPredicted RBP10.88□□□□□ -0.67
CTNNA1-244ENST00000627109 TIAM1Q13009 1591 aa10.87□□□□□ -0.67
CTNNA1-244ENST00000627109 ABCA5Q8WWZ7 1642 aa10.86□□□□□ -0.67
CTNNA1-244ENST00000627109 RANGAP1P46060 587 aaPredicted RBP10.86□□□□□ -0.67
CTNNA1-244ENST00000627109 TOPBP1Q92547 1522 aa10.86□□□□□ -0.67
CTNNA1-244ENST00000627109 EFCAB5A4FU69 1503 aa10.84□□□□□ -0.67
CTNNA1-244ENST00000627109 POLA1P09884 1462 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms