RNA–Protein interactions for RNA: ENST00000519113.5

CTNNA1-213, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-213ENST00000519113 NISCHQ9Y2I1 1504 aa47.94■■■■■ 5.26
CTNNA1-213ENST00000519113 ABCC9O60706 1549 aa43.58■■■■■ 4.57
CTNNA1-213ENST00000519113 CCDC180Q9P1Z9 1646 aa43.12■■■■■ 4.49
CTNNA1-213ENST00000519113 RB1CC1Q8TDY2 1594 aa41.31■■■■■ 4.2
CTNNA1-213ENST00000519113 DNAJC5BQ9UF47 199 aa41.27■■■■■ 4.2
CTNNA1-213ENST00000519113 NACADO15069 1562 aa40.95■■■■■ 4.15
CTNNA1-213ENST00000519113 DCAF8L2P0C7V8 631 aa40.74■■■■■ 4.11
CTNNA1-213ENST00000519113 PABPN1Q86U42 306 aaKnown RBP eCLIP40.57■■■■■ 4.09
CTNNA1-213ENST00000519113 MYO15BQ96JP2 1530 aa40.26■■■■■ 4.04
CTNNA1-213ENST00000519113 UNC13AQ9UPW8 1703 aa40.2■■■■■ 4.03
CTNNA1-213ENST00000519113 BICRAQ9NZM4 1560 aa40.06■■■■■ 4
CTNNA1-213ENST00000519113 ZCCHC6Q5VYS8 1495 aaKnown RBP39.62■■■■□ 3.93
CTNNA1-213ENST00000519113 SHROOM4Q9ULL8 1493 aa39.59■■■■□ 3.93
CTNNA1-213ENST00000519113 DCAF1Q9Y4B6 1507 aa39.59■■■■□ 3.93
CTNNA1-213ENST00000519113 CECR2Q9BXF3 1484 aa39.33■■■■□ 3.89
CTNNA1-213ENST00000519113 CC2D2AQ9P2K1 1620 aa39.32■■■■□ 3.88
CTNNA1-213ENST00000519113 SCRIBQ14160 1630 aa39.27■■■■□ 3.88
CTNNA1-213ENST00000519113 EIF4G1Q04637 1599 aaKnown RBP39.15■■■■□ 3.86
CTNNA1-213ENST00000519113 DNAJC5Q9H3Z4 198 aa38.26■■■■□ 3.72
CTNNA1-213ENST00000519113 NCAPD3P42695 1498 aa37.84■■■■□ 3.65
CTNNA1-213ENST00000519113 CUX2O14529 1486 aa37.77■■■■□ 3.64
CTNNA1-213ENST00000519113 ERCC6Q03468 1493 aa37.71■■■■□ 3.63
CTNNA1-213ENST00000519113 ATAD2BQ9ULI0 1458 aa37.64■■■■□ 3.62
CTNNA1-213ENST00000519113 SMARCA2P51531 1590 aa37.51■■■■□ 3.6
CTNNA1-213ENST00000519113 HMGXB3Q12766 1538 aa37.47■■■■□ 3.59
CTNNA1-213ENST00000519113 SMARCA4P51532 1647 aa37.43■■■■□ 3.58
CTNNA1-213ENST00000519113 NESP48681 1621 aa37.29■■■■□ 3.56
CTNNA1-213ENST00000519113 BAZ1BQ9UIG0 1483 aaKnown RBP37.26■■■■□ 3.55
CTNNA1-213ENST00000519113 BAZ1AQ9NRL2 1556 aaPredicted RBP37.25■■■■□ 3.55
CTNNA1-213ENST00000519113 PEG3Q9GZU2 1588 aa37.1■■■■□ 3.53
CTNNA1-213ENST00000519113 LAMC3Q9Y6N6 1575 aa37■■■■□ 3.51
CTNNA1-213ENST00000519113 THOC2Q8NI27 1593 aaKnown RBP36.95■■■■□ 3.51
CTNNA1-213ENST00000519113 MROH2BQ7Z745 1585 aa36.91■■■■□ 3.5
CTNNA1-213ENST00000519113 PDS5BQ9NTI5 1447 aa36.88■■■■□ 3.49
CTNNA1-213ENST00000519113 KIF21AQ7Z4S6 1674 aa36.73■■■■□ 3.47
CTNNA1-213ENST00000519113 CADPSQ9ULU8 1353 aa36.68■■■■□ 3.46
CTNNA1-213ENST00000519113 MRC2Q9UBG0 1479 aa36.53■■■■□ 3.44
CTNNA1-213ENST00000519113 WDR62O43379 1518 aa36.42■■■■□ 3.42
CTNNA1-213ENST00000519113 TRIM41Q8WV44 630 aa36.4■■■■□ 3.42
CTNNA1-213ENST00000519113 WIZO95785 1651 aa36.39■■■■□ 3.42
CTNNA1-213ENST00000519113 CEP164Q9UPV0 1460 aa36.31■■■■□ 3.4
CTNNA1-213ENST00000519113 FANCD2Q9BXW9 1451 aa36.24■■■■□ 3.39
CTNNA1-213ENST00000519113 CFTRP13569 1480 aa36.15■■■■□ 3.38
CTNNA1-213ENST00000519113 OSCARQ8IYS5 282 aa36.05■■■■□ 3.36
CTNNA1-213ENST00000519113 RSF1Q96T23 1441 aaPredicted RBP36.04■■■■□ 3.36
CTNNA1-213ENST00000519113 TOP2AP11388 1531 aaKnown RBP35.96■■■■□ 3.35
CTNNA1-213ENST00000519113 URB2Q14146 1524 aaKnown RBP35.93■■■■□ 3.34
CTNNA1-213ENST00000519113 IFT140Q96RY7 1462 aa35.62■■■■□ 3.29
CTNNA1-213ENST00000519113 PRDM2Q13029 1718 aa35.59■■■■□ 3.29
CTNNA1-213ENST00000519113 CCDC88BA6NC98 1476 aa35.59■■■■□ 3.29
CTNNA1-213ENST00000519113 ZNF608Q9ULD9 1512 aaPredicted RBP35.55■■■■□ 3.28
CTNNA1-213ENST00000519113 TOPBP1Q92547 1522 aa35.48■■■■□ 3.27
CTNNA1-213ENST00000519113 RIMBP3CA6NJZ7 1639 aa35.47■■■■□ 3.27
CTNNA1-213ENST00000519113 RIMBP3BA6NNM3 1639 aa35.47■■■■□ 3.27
CTNNA1-213ENST00000519113 RIMBP3Q9UFD9 1639 aa35.47■■■■□ 3.27
CTNNA1-213ENST00000519113 ABCC8Q09428 1581 aa35.45■■■■□ 3.27
CTNNA1-213ENST00000519113 ARHGEF11O15085 1522 aa35.37■■■■□ 3.25
CTNNA1-213ENST00000519113 DNMBPQ6XZF7 1577 aa35.3■■■■□ 3.24
CTNNA1-213ENST00000519113 EIF4G3O43432 1585 aaKnown RBP35.29■■■■□ 3.24
CTNNA1-213ENST00000519113 CYB5RLQ6IPT4 315 aa35.22■■■■□ 3.23
CTNNA1-213ENST00000519113 AQRO60306 1485 aaKnown RBP eCLIP35.22■■■■□ 3.237e-6■■□□□ 13.1
CTNNA1-213ENST00000519113 TARBP1Q13395 1621 aaKnown RBP35.15■■■■□ 3.22
CTNNA1-213ENST00000519113 FBLN2P98095 1184 aa35.13■■■■□ 3.21
CTNNA1-213ENST00000519113 POLA1P09884 1462 aaPredicted RBP35.09■■■■□ 3.21
CTNNA1-213ENST00000519113 CHD1O14646 1710 aa35.05■■■■□ 3.2
CTNNA1-213ENST00000519113 SOGA1O94964 1423 aa34.98■■■■□ 3.19
CTNNA1-213ENST00000519113 ARAP1Q96P48 1450 aa34.98■■■■□ 3.19
CTNNA1-213ENST00000519113 TRHP20396 242 aaPredicted RBP34.97■■■■□ 3.19
CTNNA1-213ENST00000519113 RAD54L2Q9Y4B4 1467 aa34.97■■■■□ 3.19
CTNNA1-213ENST00000519113 TDRD9Q8NDG6 1382 aaKnown RBP34.95■■■■□ 3.19
CTNNA1-213ENST00000519113 CHMP7Q8WUX9 453 aaPredicted RBP34.82■■■■□ 3.16
CTNNA1-213ENST00000519113 SNAPC4Q5SXM2 1469 aa34.82■■■■□ 3.16
CTNNA1-213ENST00000519113 WDR97A6NE52 1622 aa34.81■■■■□ 3.16
CTNNA1-213ENST00000519113 FGD5Q6ZNL6 1462 aa34.81■■■■□ 3.16
CTNNA1-213ENST00000519113 MAGI1Q96QZ7 1491 aaPredicted RBP34.74■■■■□ 3.15
CTNNA1-213ENST00000519113 GRIN2BQ13224 1484 aa34.71■■■■□ 3.15
CTNNA1-213ENST00000519113 CLASP1Q7Z460 1538 aa34.71■■■■□ 3.15
CTNNA1-213ENST00000519113 CUX1P39880 1505 aa34.71■■■■□ 3.15
CTNNA1-213ENST00000519113 SYNJ1O43426 1573 aa34.7■■■■□ 3.14
CTNNA1-213ENST00000519113 SYNJ2O15056 1496 aa34.64■■■■□ 3.14
CTNNA1-213ENST00000519113 GAPVD1Q14C86 1478 aa34.53■■■■□ 3.12
CTNNA1-213ENST00000519113 ABCA10Q8WWZ4 1543 aa34.42■■■■□ 3.1
CTNNA1-213ENST00000519113 PBRM1Q86U86 1689 aa34.41■■■■□ 3.1
CTNNA1-213ENST00000519113 ABCA5Q8WWZ7 1642 aa34.33■■■■□ 3.09
CTNNA1-213ENST00000519113 AEBP2Q6ZN18 517 aaPredicted RBP34.28■■■■□ 3.08
CTNNA1-213ENST00000519113 WRNQ14191 1432 aaPredicted RBP eCLIP34.25■■■■□ 3.07
CTNNA1-213ENST00000519113 GRIN2AQ12879 1464 aa34.24■■■■□ 3.07
CTNNA1-213ENST00000519113 SUPT5HO00267 1087 aaKnown RBP34.2■■■■□ 3.07
CTNNA1-213ENST00000519113 NUP160Q12769 1436 aa34.14■■■■□ 3.06
CTNNA1-213ENST00000519113 ERCC6L2Q5T890 1561 aa34.11■■■■□ 3.05
CTNNA1-213ENST00000519113 ADAMTS12P58397 1594 aa34.11■■■■□ 3.05
CTNNA1-213ENST00000519113 FHAD1B1AJZ9 1412 aa34.09■■■■□ 3.05
CTNNA1-213ENST00000519113 CEP170Q5SW79 1584 aa34.08■■■■□ 3.05
CTNNA1-213ENST00000519113 TOP2BQ02880 1626 aa34.03■■■■□ 3.04
CTNNA1-213ENST00000519113 BIVM-ERCC5R4GMW8 1640 aa34■■■■□ 3.03
CTNNA1-213ENST00000519113 ERICH3Q5RHP9 1530 aa33.98■■■■□ 3.03
CTNNA1-213ENST00000519113 SHROOM2Q13796 1616 aa33.97■■■■□ 3.03
CTNNA1-213ENST00000519113 PRG4Q92954 1404 aaPredicted RBP33.87■■■■□ 3.01
CTNNA1-213ENST00000519113 JPH4Q96JJ6 628 aa33.87■■■■□ 3.01
CTNNA1-213ENST00000519113 NPM1P06748 294 aaKnown RBP eCLIP33.71■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms