RNA–Protein interactions for RNA: ENST00000446515.1

KPNA6-202, Transcript of karyopherin subunit alpha 6, humanhuman

TSL 3

Gene KPNA6, Length 965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA6-202ENST00000446515 AEBP2Q6ZN18 517 aaPredicted RBP19.19■□□□□ 0.66
KPNA6-202ENST00000446515 CHIC1Q5VXU3 224 aa18.87■□□□□ 0.61
KPNA6-202ENST00000446515 PHF23Q9BUL5 403 aaPredicted RBP16.61■□□□□ 0.25
KPNA6-202ENST00000446515 SENP3Q9H4L4 574 aaPredicted RBP16.28■□□□□ 0.2
KPNA6-202ENST00000446515 PLPPR3Q6T4P5 718 aa15.37■□□□□ 0.05
KPNA6-202ENST00000446515 FOXD1Q16676 465 aa15.08■□□□□ 0
KPNA6-202ENST00000446515 NISCHQ9Y2I1 1504 aa14.85□□□□□ -0.03
KPNA6-202ENST00000446515 PPP6R1Q9UPN7 881 aa14.62□□□□□ -0.07
KPNA6-202ENST00000446515 ADRA2BP18089 450 aa14.6□□□□□ -0.07
KPNA6-202ENST00000446515 PIAS4Q8N2W9 510 aaPredicted RBP14.24□□□□□ -0.13
KPNA6-202ENST00000446515 MSH5O43196 834 aa13.87□□□□□ -0.19
KPNA6-202ENST00000446515 PPP4R3CPQ6ZMV5 832 aa13.56□□□□□ -0.24
KPNA6-202ENST00000446515 SCAF1Q9H7N4 1312 aaKnown RBP13.39□□□□□ -0.27
KPNA6-202ENST00000446515 KCNA4P22459 653 aa13.37□□□□□ -0.27
KPNA6-202ENST00000446515 CCDC180Q9P1Z9 1646 aa13.31□□□□□ -0.28
KPNA6-202ENST00000446515 NCBP3Q53F19 620 aaKnown RBP13.25□□□□□ -0.29
KPNA6-202ENST00000446515 MAPK8IP2Q13387 824 aaPredicted RBP13.21□□□□□ -0.29
KPNA6-202ENST00000446515 CNKSR2Q8WXI2 1034 aa13.17□□□□□ -0.3
KPNA6-202ENST00000446515 NPM3O75607 178 aaKnown RBP13.04□□□□□ -0.32
KPNA6-202ENST00000446515 DMRT2Q9Y5R5 561 aa13.02□□□□□ -0.33
KPNA6-202ENST00000446515 RNF216Q9NWF9 866 aaPredicted RBP12.88□□□□□ -0.35
KPNA6-202ENST00000446515 ABCC9O60706 1549 aa12.88□□□□□ -0.35
KPNA6-202ENST00000446515 HOXD11P31277 338 aaPredicted RBP12.8□□□□□ -0.36
KPNA6-202ENST00000446515 SLC4A1APQ9BWU0 796 aaKnown RBP12.75□□□□□ -0.37
KPNA6-202ENST00000446515 DNAJC5BQ9UF47 199 aa12.7□□□□□ -0.38
KPNA6-202ENST00000446515 EHMT2Q96KQ7 1210 aa12.49□□□□□ -0.41
KPNA6-202ENST00000446515 RB1CC1Q8TDY2 1594 aa12.47□□□□□ -0.41
KPNA6-202ENST00000446515 NACADO15069 1562 aa12.46□□□□□ -0.42
KPNA6-202ENST00000446515 MYO15BQ96JP2 1530 aa12.42□□□□□ -0.42
KPNA6-202ENST00000446515 POTEDQ86YR6 584 aa12.41□□□□□ -0.42
KPNA6-202ENST00000446515 DCAF8L1A6NGE4 600 aa12.4□□□□□ -0.42
KPNA6-202ENST00000446515 ZCCHC6Q5VYS8 1495 aaKnown RBP12.39□□□□□ -0.43
KPNA6-202ENST00000446515 CSRNP3Q8WYN3 585 aa12.35□□□□□ -0.43
KPNA6-202ENST00000446515 DCAF1Q9Y4B6 1507 aa12.35□□□□□ -0.43
KPNA6-202ENST00000446515 ZBTB22O15209 634 aa12.29□□□□□ -0.44
KPNA6-202ENST00000446515 SLC4A2P04920 1241 aa12.29□□□□□ -0.44
KPNA6-202ENST00000446515 FOXD4L1Q9NU39 408 aa12.28□□□□□ -0.44
KPNA6-202ENST00000446515 UNC13AQ9UPW8 1703 aa12.27□□□□□ -0.45
KPNA6-202ENST00000446515 DCAF8L2P0C7V8 631 aa12.2□□□□□ -0.46
KPNA6-202ENST00000446515 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.18□□□□□ -0.463e-6■□□□□ 11.1
KPNA6-202ENST00000446515 BICRAQ9NZM4 1560 aa12.1□□□□□ -0.47
KPNA6-202ENST00000446515 MYCNP04198 464 aaPredicted RBP12.05□□□□□ -0.48
KPNA6-202ENST00000446515 SCRIBQ14160 1630 aa12.04□□□□□ -0.48
KPNA6-202ENST00000446515 SHROOM4Q9ULL8 1493 aa12.02□□□□□ -0.48
KPNA6-202ENST00000446515 U3KPZ7 1027 aaPredicted RBP11.99□□□□□ -0.49
KPNA6-202ENST00000446515 PABPN1Q86U42 306 aaKnown RBP eCLIP11.95□□□□□ -0.5
KPNA6-202ENST00000446515 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.91□□□□□ -0.5
KPNA6-202ENST00000446515 HNRNPUL2Q1KMD3 747 aaKnown RBP11.91□□□□□ -0.5
KPNA6-202ENST00000446515 RNF39Q9H2S5 420 aa11.9□□□□□ -0.5
KPNA6-202ENST00000446515 ATXN8OSP0DMR3 200 aa11.87□□□□□ -0.51
KPNA6-202ENST00000446515 SAMD1Q6SPF0 538 aaPredicted RBP11.87□□□□□ -0.51
KPNA6-202ENST00000446515 C1QBPQ07021 282 aaKnown RBP11.78□□□□□ -0.52
KPNA6-202ENST00000446515 EIF4G1Q04637 1599 aaKnown RBP11.77□□□□□ -0.53
KPNA6-202ENST00000446515 APLP2Q06481 763 aa11.75□□□□□ -0.53
KPNA6-202ENST00000446515 CC2D2AQ9P2K1 1620 aa11.71□□□□□ -0.53
KPNA6-202ENST00000446515 ATF5Q9Y2D1 282 aaPredicted RBP11.71□□□□□ -0.53
KPNA6-202ENST00000446515 SPINK5Q9NQ38 1064 aaPredicted RBP11.61□□□□□ -0.55
KPNA6-202ENST00000446515 CECR2Q9BXF3 1484 aa11.6□□□□□ -0.55
KPNA6-202ENST00000446515 CAPN15O75808 1086 aa11.56□□□□□ -0.56
KPNA6-202ENST00000446515 SMARCA4P51532 1647 aa11.56□□□□□ -0.56
KPNA6-202ENST00000446515 ZNF219Q9P2Y4 722 aaPredicted RBP11.55□□□□□ -0.56
KPNA6-202ENST00000446515 TRHP20396 242 aaPredicted RBP11.53□□□□□ -0.56
KPNA6-202ENST00000446515 BAZ1AQ9NRL2 1556 aaPredicted RBP11.53□□□□□ -0.56
KPNA6-202ENST00000446515 CACNB1Q02641 598 aaPredicted RBP11.48□□□□□ -0.57
KPNA6-202ENST00000446515 PEG3Q9GZU2 1588 aa11.48□□□□□ -0.57
KPNA6-202ENST00000446515 SMARCA2P51531 1590 aa11.47□□□□□ -0.57
KPNA6-202ENST00000446515 NCAPD3P42695 1498 aa11.46□□□□□ -0.57
KPNA6-202ENST00000446515 HMGXB3Q12766 1538 aa11.45□□□□□ -0.58
KPNA6-202ENST00000446515 ATAD2BQ9ULI0 1458 aa11.45□□□□□ -0.58
KPNA6-202ENST00000446515 MROH2BQ7Z745 1585 aa11.42□□□□□ -0.58
KPNA6-202ENST00000446515 POLA2Q14181 598 aa11.39□□□□□ -0.59
KPNA6-202ENST00000446515 DSG3P32926 999 aa11.37□□□□□ -0.59
KPNA6-202ENST00000446515 BAZ1BQ9UIG0 1483 aaKnown RBP11.35□□□□□ -0.59
KPNA6-202ENST00000446515 ABCB7O75027 752 aa11.33□□□□□ -0.6
KPNA6-202ENST00000446515 WIZO95785 1651 aa11.32□□□□□ -0.6
KPNA6-202ENST00000446515 RSF1Q96T23 1441 aaPredicted RBP11.26□□□□□ -0.61
KPNA6-202ENST00000446515 DNAJC5Q9H3Z4 198 aa11.26□□□□□ -0.61
KPNA6-202ENST00000446515 FBLN2P98095 1184 aa11.22□□□□□ -0.61
KPNA6-202ENST00000446515 ZBTB12Q9Y330 459 aaPredicted RBP11.22□□□□□ -0.61
KPNA6-202ENST00000446515 TOP2AP11388 1531 aaKnown RBP11.21□□□□□ -0.61
KPNA6-202ENST00000446515 MKRN4PQ13434 485 aaPredicted RBP11.21□□□□□ -0.61
KPNA6-202ENST00000446515 LAMC3Q9Y6N6 1575 aa11.2□□□□□ -0.62
KPNA6-202ENST00000446515 NESP48681 1621 aa11.15□□□□□ -0.62
KPNA6-202ENST00000446515 FKBP8Q14318 412 aa11.13□□□□□ -0.63
KPNA6-202ENST00000446515 KIF21AQ7Z4S6 1674 aa11.11□□□□□ -0.63
KPNA6-202ENST00000446515 PRDM2Q13029 1718 aa11.11□□□□□ -0.63
KPNA6-202ENST00000446515 ERCC6Q03468 1493 aa11.1□□□□□ -0.63
KPNA6-202ENST00000446515 CADPSQ9ULU8 1353 aa11.09□□□□□ -0.63
KPNA6-202ENST00000446515 THOC2Q8NI27 1593 aaKnown RBP11.08□□□□□ -0.64
KPNA6-202ENST00000446515 CUX2O14529 1486 aa11.06□□□□□ -0.64
KPNA6-202ENST00000446515 PDS5BQ9NTI5 1447 aa11.06□□□□□ -0.64
KPNA6-202ENST00000446515 CFTRP13569 1480 aa11.06□□□□□ -0.64
KPNA6-202ENST00000446515 CCDC88BA6NC98 1476 aa11.02□□□□□ -0.65
KPNA6-202ENST00000446515 SPDYE4A6NLX3 237 aa11.02□□□□□ -0.65
KPNA6-202ENST00000446515 CEP164Q9UPV0 1460 aa10.98□□□□□ -0.65
KPNA6-202ENST00000446515 WDR62O43379 1518 aa10.98□□□□□ -0.65
KPNA6-202ENST00000446515 OSCARQ8IYS5 282 aa10.97□□□□□ -0.65
KPNA6-202ENST00000446515 FANCD2Q9BXW9 1451 aa10.97□□□□□ -0.65
KPNA6-202ENST00000446515 MRC2Q9UBG0 1479 aa10.97□□□□□ -0.65
KPNA6-202ENST00000446515 SPDYE2BA6NHP3 402 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms