RNA–Protein interactions for RNA: ENST00000458477.6

PXN-206, Transcript of paxillin, humanhuman

TSL 1 (best) BASIC

Gene PXN, Length 3,807 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-206ENST00000458477 NISCHQ9Y2I1 1504 aa20.15■□□□□ 0.82
PXN-206ENST00000458477 SHROOM4Q9ULL8 1493 aa18.32■□□□□ 0.52
PXN-206ENST00000458477 DCAF8L2P0C7V8 631 aa18.27■□□□□ 0.52
PXN-206ENST00000458477 SUPT5HO00267 1087 aaKnown RBP18.27■□□□□ 0.51
PXN-206ENST00000458477 PCGF6Q9BYE7 350 aa17.49■□□□□ 0.39
PXN-206ENST00000458477 CHIC1Q5VXU3 224 aa17.32■□□□□ 0.36
PXN-206ENST00000458477 HRCP23327 699 aa17.29■□□□□ 0.36
PXN-206ENST00000458477 EHMT2Q96KQ7 1210 aa17.14■□□□□ 0.33
PXN-206ENST00000458477 PPARGC1BQ86YN6 1023 aaKnown RBP17.08■□□□□ 0.33
PXN-206ENST00000458477 LOC105371045A0A1W2PR82 267 aa17.08■□□□□ 0.32
PXN-206ENST00000458477 FAM9AQ8IZU1 332 aaPredicted RBP17.02■□□□□ 0.32
PXN-206ENST00000458477 ZCCHC6Q5VYS8 1495 aaKnown RBP16.97■□□□□ 0.31
PXN-206ENST00000458477 MYO15BQ96JP2 1530 aa16.92■□□□□ 0.3
PXN-206ENST00000458477 ABCC9O60706 1549 aa16.92■□□□□ 0.3
PXN-206ENST00000458477 CCDC180Q9P1Z9 1646 aa16.85■□□□□ 0.29
PXN-206ENST00000458477 TRIM41Q8WV44 630 aa16.85■□□□□ 0.29
PXN-206ENST00000458477 TRIM26Q12899 539 aaPredicted RBP16.84■□□□□ 0.29
PXN-206ENST00000458477 ZEB1P37275 1124 aaPredicted RBP16.69■□□□□ 0.26
PXN-206ENST00000458477 TTBK1Q5TCY1 1321 aaPredicted RBP16.62■□□□□ 0.25
PXN-206ENST00000458477 DCAF1Q9Y4B6 1507 aa16.55■□□□□ 0.24
PXN-206ENST00000458477 CCER1Q8TC90 406 aaPredicted RBP16.5■□□□□ 0.23
PXN-206ENST00000458477 PABPN1Q86U42 306 aaKnown RBP eCLIP16.36■□□□□ 0.21
PXN-206ENST00000458477 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.33■□□□□ 0.2
PXN-206ENST00000458477 PELP1Q8IZL8 1130 aaKnown RBP16.31■□□□□ 0.2
PXN-206ENST00000458477 SCRIBQ14160 1630 aa16.23■□□□□ 0.19
PXN-206ENST00000458477 CENPBP07199 599 aaPredicted RBP16.23■□□□□ 0.19
PXN-206ENST00000458477 UBTFP17480 764 aaKnown RBP16.22■□□□□ 0.19
PXN-206ENST00000458477 RSF1Q96T23 1441 aaPredicted RBP16.19■□□□□ 0.18
PXN-206ENST00000458477 RANGAP1P46060 587 aaPredicted RBP16.15■□□□□ 0.18
PXN-206ENST00000458477 YTHDC1Q96MU7 727 aaKnown RBP16.13■□□□□ 0.17
PXN-206ENST00000458477 APLP2Q06481 763 aa16.11■□□□□ 0.17
PXN-206ENST00000458477 DIEXFQ68CQ4 756 aaKnown RBP16.09■□□□□ 0.17
PXN-206ENST00000458477 SCAF1Q9H7N4 1312 aaKnown RBP16.08■□□□□ 0.16
PXN-206ENST00000458477 RB1CC1Q8TDY2 1594 aa16.05■□□□□ 0.16
PXN-206ENST00000458477 NACADO15069 1562 aa16.05■□□□□ 0.16
PXN-206ENST00000458477 HNRNPUL2Q1KMD3 747 aaKnown RBP15.99■□□□□ 0.15
PXN-206ENST00000458477 GTF3C3Q9Y5Q9 886 aa15.97■□□□□ 0.15
PXN-206ENST00000458477 ACIN1Q9UKV3 1341 aaKnown RBP15.96■□□□□ 0.15
PXN-206ENST00000458477 NEUROD1Q13562 356 aa15.91■□□□□ 0.14
PXN-206ENST00000458477 CECR2Q9BXF3 1484 aa15.89■□□□□ 0.13
PXN-206ENST00000458477 CSRNP3Q8WYN3 585 aa15.81■□□□□ 0.12
PXN-206ENST00000458477 ZNF316A6NFI3 1004 aaPredicted RBP15.8■□□□□ 0.12
PXN-206ENST00000458477 MROH2BQ7Z745 1585 aa15.75■□□□□ 0.11
PXN-206ENST00000458477 CEP162Q5TB80 1403 aa15.69■□□□□ 0.1
PXN-206ENST00000458477 ITGAEP38570 1179 aa15.67■□□□□ 0.1
PXN-206ENST00000458477 WIZO95785 1651 aa15.61■□□□□ 0.09
PXN-206ENST00000458477 MYT1Q01538 1121 aa15.61■□□□□ 0.09
PXN-206ENST00000458477 SOGA1O94964 1423 aa15.59■□□□□ 0.09
PXN-206ENST00000458477 MIER1Q8N108 512 aa15.58■□□□□ 0.08
PXN-206ENST00000458477 ATP1B4Q9UN42 357 aaPredicted RBP15.58■□□□□ 0.08
PXN-206ENST00000458477 ABCC8Q09428 1581 aa15.57■□□□□ 0.08
PXN-206ENST00000458477 CCDC88BA6NC98 1476 aa15.57■□□□□ 0.08
PXN-206ENST00000458477 TNIKQ9UKE5 1360 aa15.56■□□□□ 0.08
PXN-206ENST00000458477 BAZ1AQ9NRL2 1556 aaPredicted RBP15.53■□□□□ 0.08
PXN-206ENST00000458477 GOLGA3Q08378 1498 aa15.47■□□□□ 0.07
PXN-206ENST00000458477 CLIP1P30622 1438 aa15.47■□□□□ 0.07
PXN-206ENST00000458477 EEA1Q15075 1411 aa15.46■□□□□ 0.07
PXN-206ENST00000458477 WRNQ14191 1432 aaPredicted RBP eCLIP15.43■□□□□ 0.06
PXN-206ENST00000458477 RUSC2Q8N2Y8 1516 aa15.39■□□□□ 0.05
PXN-206ENST00000458477 NEFLP07196 543 aa15.36■□□□□ 0.05
PXN-206ENST00000458477 BAZ1BQ9UIG0 1483 aaKnown RBP15.34■□□□□ 0.05
PXN-206ENST00000458477 BCANQ96GW7 911 aa15.34■□□□□ 0.05
PXN-206ENST00000458477 TOP2AP11388 1531 aaKnown RBP15.34■□□□□ 0.05
PXN-206ENST00000458477 CEP164Q9UPV0 1460 aa15.33■□□□□ 0.04
PXN-206ENST00000458477 FAM50AQ14320 339 aaKnown RBP15.32■□□□□ 0.04
PXN-206ENST00000458477 VPS8Q8N3P4 1428 aa15.24■□□□□ 0.03
PXN-206ENST00000458477 SMARCA4P51532 1647 aa15.22■□□□□ 0.03
PXN-206ENST00000458477 SMARCA2P51531 1590 aa15.21■□□□□ 0.03
PXN-206ENST00000458477 P3H3Q8IVL6 736 aa15.21■□□□□ 0.03
PXN-206ENST00000458477 DDX10Q13206 875 aaKnown RBP15.17■□□□□ 0.02
PXN-206ENST00000458477 KANK4Q5T7N3 995 aaPredicted RBP15.16■□□□□ 0.02
PXN-206ENST00000458477 RAPGEF2Q9Y4G8 1499 aa15.14■□□□□ 0.01
PXN-206ENST00000458477 ATAD2BQ9ULI0 1458 aa15.14■□□□□ 0.01
PXN-206ENST00000458477 CLSPNQ9HAW4 1339 aa15.13■□□□□ 0.01
PXN-206ENST00000458477 ERICH6Q7L0X2 663 aa15.13■□□□□ 0.01
PXN-206ENST00000458477 FKBP8Q14318 412 aa15.12■□□□□ 0.01
PXN-206ENST00000458477 SUPT16HQ9Y5B9 1047 aaKnown RBP15.12■□□□□ 0.01
PXN-206ENST00000458477 HIRIP3Q9BW71 556 aaPredicted RBP15.11■□□□□ 0.01
PXN-206ENST00000458477 ANP32CO43423 234 aa15.09■□□□□ 0.01
PXN-206ENST00000458477 BICRAQ9NZM4 1560 aa15.08■□□□□ 0
PXN-206ENST00000458477 TRIM52Q96A61 297 aa15.06■□□□□ 0
PXN-206ENST00000458477 DHX57Q6P158 1386 aaKnown RBP15.04■□□□□ -0
PXN-206ENST00000458477 CCNB3Q8WWL7 1395 aa15.03■□□□□ -0
PXN-206ENST00000458477 CNGB1Q14028 1251 aaPredicted RBP15.03■□□□□ -0
PXN-206ENST00000458477 SIN3AQ96ST3 1273 aa15.02■□□□□ -0
PXN-206ENST00000458477 KIF27Q86VH2 1401 aa15.01□□□□□ -0.01
PXN-206ENST00000458477 UNC13AQ9UPW8 1703 aa15□□□□□ -0.01
PXN-206ENST00000458477 EIF4G1Q04637 1599 aaKnown RBP14.99□□□□□ -0.01
PXN-206ENST00000458477 FBLN2P98095 1184 aa14.97□□□□□ -0.01
PXN-206ENST00000458477 KCNH8Q96L42 1107 aa14.97□□□□□ -0.01
PXN-206ENST00000458477 SYNJ1O43426 1573 aa14.97□□□□□ -0.01
PXN-206ENST00000458477 POLR3GLQ9BT43 218 aa14.95□□□□□ -0.02
PXN-206ENST00000458477 KIF21BO75037 1637 aa14.94□□□□□ -0.02
PXN-206ENST00000458477 TONSLQ96HA7 1378 aa14.94□□□□□ -0.02
PXN-206ENST00000458477 RAB3GAP2Q9H2M9 1393 aa14.92□□□□□ -0.02
PXN-206ENST00000458477 HNRNPUQ00839 825 aaKnown RBP eCLIP14.9□□□□□ -0.02
PXN-206ENST00000458477 TSHZ2Q9NRE2 1034 aa14.89□□□□□ -0.03
PXN-206ENST00000458477 NCAPD3P42695 1498 aa14.88□□□□□ -0.03
PXN-206ENST00000458477 ARID3CA6NKF2 412 aa14.87□□□□□ -0.03
PXN-206ENST00000458477 IRX6P78412 446 aaPredicted RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms