RNA–Protein interactions for RNA: ENST00000520158.5

CTNNA1-219, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 719 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-219ENST00000520158 AEBP2Q6ZN18 517 aaPredicted RBP15.47■□□□□ 0.07
CTNNA1-219ENST00000520158 CHIC1Q5VXU3 224 aa14.37□□□□□ -0.11
CTNNA1-219ENST00000520158 NISCHQ9Y2I1 1504 aa14.23□□□□□ -0.13
CTNNA1-219ENST00000520158 SENP3Q9H4L4 574 aaPredicted RBP13.25□□□□□ -0.29
CTNNA1-219ENST00000520158 PHF23Q9BUL5 403 aaPredicted RBP13□□□□□ -0.33
CTNNA1-219ENST00000520158 CCDC180Q9P1Z9 1646 aa12.77□□□□□ -0.36
CTNNA1-219ENST00000520158 POTEDQ86YR6 584 aa12.77□□□□□ -0.37
CTNNA1-219ENST00000520158 ABCC9O60706 1549 aa12.67□□□□□ -0.38
CTNNA1-219ENST00000520158 FOXD1Q16676 465 aa12.46□□□□□ -0.41
CTNNA1-219ENST00000520158 RB1CC1Q8TDY2 1594 aa12.13□□□□□ -0.47
CTNNA1-219ENST00000520158 NACADO15069 1562 aa12.09□□□□□ -0.47
CTNNA1-219ENST00000520158 MYO15BQ96JP2 1530 aa11.99□□□□□ -0.49
CTNNA1-219ENST00000520158 DNAJC5BQ9UF47 199 aa11.95□□□□□ -0.5
CTNNA1-219ENST00000520158 MSH5O43196 834 aa11.89□□□□□ -0.51
CTNNA1-219ENST00000520158 DCAF8L2P0C7V8 631 aa11.89□□□□□ -0.51
CTNNA1-219ENST00000520158 UNC13AQ9UPW8 1703 aa11.85□□□□□ -0.51
CTNNA1-219ENST00000520158 DCAF1Q9Y4B6 1507 aa11.82□□□□□ -0.52
CTNNA1-219ENST00000520158 PABPN1Q86U42 306 aaKnown RBP eCLIP11.81□□□□□ -0.52
CTNNA1-219ENST00000520158 BICRAQ9NZM4 1560 aa11.79□□□□□ -0.52
CTNNA1-219ENST00000520158 ZCCHC6Q5VYS8 1495 aaKnown RBP11.78□□□□□ -0.52
CTNNA1-219ENST00000520158 SHROOM4Q9ULL8 1493 aa11.7□□□□□ -0.54
CTNNA1-219ENST00000520158 SCRIBQ14160 1630 aa11.54□□□□□ -0.56
CTNNA1-219ENST00000520158 CC2D2AQ9P2K1 1620 aa11.49□□□□□ -0.57
CTNNA1-219ENST00000520158 EIF4G1Q04637 1599 aaKnown RBP11.48□□□□□ -0.57
CTNNA1-219ENST00000520158 CECR2Q9BXF3 1484 aa11.45□□□□□ -0.58
CTNNA1-219ENST00000520158 PIAS4Q8N2W9 510 aaPredicted RBP11.42□□□□□ -0.58
CTNNA1-219ENST00000520158 NCAPD3P42695 1498 aa11.19□□□□□ -0.62
CTNNA1-219ENST00000520158 PPP6R1Q9UPN7 881 aa11.15□□□□□ -0.62
CTNNA1-219ENST00000520158 ATAD2BQ9ULI0 1458 aa11.11□□□□□ -0.63
CTNNA1-219ENST00000520158 SMARCA2P51531 1590 aa11.07□□□□□ -0.64
CTNNA1-219ENST00000520158 SMARCA4P51532 1647 aa11.07□□□□□ -0.64
CTNNA1-219ENST00000520158 HMGXB3Q12766 1538 aa11.06□□□□□ -0.64
CTNNA1-219ENST00000520158 BAZ1AQ9NRL2 1556 aaPredicted RBP11.04□□□□□ -0.64
CTNNA1-219ENST00000520158 PEG3Q9GZU2 1588 aa11.03□□□□□ -0.64
CTNNA1-219ENST00000520158 ADRA2BP18089 450 aa11.03□□□□□ -0.64
CTNNA1-219ENST00000520158 DNAJC5Q9H3Z4 198 aa11□□□□□ -0.65
CTNNA1-219ENST00000520158 CUX2O14529 1486 aa11□□□□□ -0.65
CTNNA1-219ENST00000520158 BAZ1BQ9UIG0 1483 aaKnown RBP10.96□□□□□ -0.65
CTNNA1-219ENST00000520158 MROH2BQ7Z745 1585 aa10.94□□□□□ -0.66
CTNNA1-219ENST00000520158 ERCC6Q03468 1493 aa10.93□□□□□ -0.66
CTNNA1-219ENST00000520158 NESP48681 1621 aa10.91□□□□□ -0.66
CTNNA1-219ENST00000520158 LAMC3Q9Y6N6 1575 aa10.9□□□□□ -0.67
CTNNA1-219ENST00000520158 PLPPR3Q6T4P5 718 aa10.86□□□□□ -0.67
CTNNA1-219ENST00000520158 PDS5BQ9NTI5 1447 aa10.83□□□□□ -0.68
CTNNA1-219ENST00000520158 THOC2Q8NI27 1593 aaKnown RBP10.82□□□□□ -0.68
CTNNA1-219ENST00000520158 CADPSQ9ULU8 1353 aa10.81□□□□□ -0.68
CTNNA1-219ENST00000520158 WIZO95785 1651 aa10.79□□□□□ -0.68
CTNNA1-219ENST00000520158 KIF21AQ7Z4S6 1674 aa10.76□□□□□ -0.69
CTNNA1-219ENST00000520158 RSF1Q96T23 1441 aaPredicted RBP10.74□□□□□ -0.69
CTNNA1-219ENST00000520158 MRC2Q9UBG0 1479 aa10.7□□□□□ -0.7
CTNNA1-219ENST00000520158 WDR62O43379 1518 aa10.69□□□□□ -0.7
CTNNA1-219ENST00000520158 CFTRP13569 1480 aa10.69□□□□□ -0.7
CTNNA1-219ENST00000520158 TOP2AP11388 1531 aaKnown RBP10.68□□□□□ -0.7
CTNNA1-219ENST00000520158 FANCD2Q9BXW9 1451 aa10.65□□□□□ -0.7
CTNNA1-219ENST00000520158 CEP164Q9UPV0 1460 aa10.65□□□□□ -0.7
CTNNA1-219ENST00000520158 CACNB1Q02641 598 aaPredicted RBP10.57□□□□□ -0.72
CTNNA1-219ENST00000520158 URB2Q14146 1524 aaKnown RBP10.57□□□□□ -0.72
CTNNA1-219ENST00000520158 CCDC88BA6NC98 1476 aa10.56□□□□□ -0.72
CTNNA1-219ENST00000520158 PRDM2Q13029 1718 aa10.55□□□□□ -0.72
CTNNA1-219ENST00000520158 OSCARQ8IYS5 282 aa10.5□□□□□ -0.73
CTNNA1-219ENST00000520158 ABCC8Q09428 1581 aa10.49□□□□□ -0.73
CTNNA1-219ENST00000520158 IFT140Q96RY7 1462 aa10.47□□□□□ -0.73
CTNNA1-219ENST00000520158 TOPBP1Q92547 1522 aa10.46□□□□□ -0.74
CTNNA1-219ENST00000520158 DMRT2Q9Y5R5 561 aa10.43□□□□□ -0.74
CTNNA1-219ENST00000520158 DNMBPQ6XZF7 1577 aa10.42□□□□□ -0.74
CTNNA1-219ENST00000520158 ZNF608Q9ULD9 1512 aaPredicted RBP10.42□□□□□ -0.74
CTNNA1-219ENST00000520158 TRIM41Q8WV44 630 aa10.39□□□□□ -0.75
CTNNA1-219ENST00000520158 TARBP1Q13395 1621 aaKnown RBP10.38□□□□□ -0.75
CTNNA1-219ENST00000520158 EIF4G3O43432 1585 aaKnown RBP10.35□□□□□ -0.75
CTNNA1-219ENST00000520158 MAPK8IP2Q13387 824 aaPredicted RBP10.34□□□□□ -0.75
CTNNA1-219ENST00000520158 POLA1P09884 1462 aaPredicted RBP10.34□□□□□ -0.75
CTNNA1-219ENST00000520158 AQRO60306 1485 aaKnown RBP eCLIP10.33□□□□□ -0.764e-6■■■□□ 18.5
CTNNA1-219ENST00000520158 WDR97A6NE52 1622 aa10.31□□□□□ -0.76
CTNNA1-219ENST00000520158 RIMBP3CA6NJZ7 1639 aa10.31□□□□□ -0.76
CTNNA1-219ENST00000520158 RIMBP3BA6NNM3 1639 aa10.31□□□□□ -0.76
CTNNA1-219ENST00000520158 RIMBP3Q9UFD9 1639 aa10.31□□□□□ -0.76
CTNNA1-219ENST00000520158 SOGA1O94964 1423 aa10.31□□□□□ -0.76
CTNNA1-219ENST00000520158 ARHGEF11O15085 1522 aa10.29□□□□□ -0.76
CTNNA1-219ENST00000520158 RAD54L2Q9Y4B4 1467 aa10.28□□□□□ -0.76
CTNNA1-219ENST00000520158 CUX1P39880 1505 aa10.28□□□□□ -0.76
CTNNA1-219ENST00000520158 FGD5Q6ZNL6 1462 aa10.27□□□□□ -0.77
CTNNA1-219ENST00000520158 CHD1O14646 1710 aa10.27□□□□□ -0.77
CTNNA1-219ENST00000520158 TDRD9Q8NDG6 1382 aaKnown RBP10.26□□□□□ -0.77
CTNNA1-219ENST00000520158 MAGI1Q96QZ7 1491 aaPredicted RBP10.23□□□□□ -0.77
CTNNA1-219ENST00000520158 GRIN2BQ13224 1484 aa10.22□□□□□ -0.77
CTNNA1-219ENST00000520158 FBLN2P98095 1184 aa10.2□□□□□ -0.78
CTNNA1-219ENST00000520158 SNAPC4Q5SXM2 1469 aa10.2□□□□□ -0.78
CTNNA1-219ENST00000520158 CYB5RLQ6IPT4 315 aa10.2□□□□□ -0.78
CTNNA1-219ENST00000520158 CLASP1Q7Z460 1538 aa10.19□□□□□ -0.78
CTNNA1-219ENST00000520158 ABCA10Q8WWZ4 1543 aa10.19□□□□□ -0.78
CTNNA1-219ENST00000520158 SYNJ2O15056 1496 aa10.18□□□□□ -0.78
CTNNA1-219ENST00000520158 ARAP1Q96P48 1450 aa10.18□□□□□ -0.78
CTNNA1-219ENST00000520158 CHMP7Q8WUX9 453 aaPredicted RBP10.18□□□□□ -0.78
CTNNA1-219ENST00000520158 GAPVD1Q14C86 1478 aa10.17□□□□□ -0.78
CTNNA1-219ENST00000520158 SUPT5HO00267 1087 aaKnown RBP10.17□□□□□ -0.78
CTNNA1-219ENST00000520158 SYNJ1O43426 1573 aa10.17□□□□□ -0.78
CTNNA1-219ENST00000520158 ABCA5Q8WWZ7 1642 aa10.15□□□□□ -0.78
CTNNA1-219ENST00000520158 PBRM1Q86U86 1689 aa10.14□□□□□ -0.79
CTNNA1-219ENST00000520158 WRNQ14191 1432 aaPredicted RBP eCLIP10.14□□□□□ -0.79
CTNNA1-219ENST00000520158 TOP2BQ02880 1626 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms