RNA–Protein interactions for RNA: ENST00000302763.11

CTNNA1-201, Transcript of catenin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNA1, Length 3,756 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-201ENST00000302763 NISCHQ9Y2I1 1504 aa17.36■□□□□ 0.37
CTNNA1-201ENST00000302763 CCDC180Q9P1Z9 1646 aa15.24■□□□□ 0.03
CTNNA1-201ENST00000302763 ZCCHC6Q5VYS8 1495 aaKnown RBP14.68□□□□□ -0.06
CTNNA1-201ENST00000302763 DCAF1Q9Y4B6 1507 aa14.47□□□□□ -0.09
CTNNA1-201ENST00000302763 MYO15BQ96JP2 1530 aa14.27□□□□□ -0.13
CTNNA1-201ENST00000302763 NACADO15069 1562 aa13.99□□□□□ -0.17
CTNNA1-201ENST00000302763 UNC13AQ9UPW8 1703 aa13.96□□□□□ -0.17
CTNNA1-201ENST00000302763 ABCC9O60706 1549 aa13.94□□□□□ -0.18
CTNNA1-201ENST00000302763 SCRIBQ14160 1630 aa13.82□□□□□ -0.2
CTNNA1-201ENST00000302763 SHROOM4Q9ULL8 1493 aa13.81□□□□□ -0.2
CTNNA1-201ENST00000302763 RB1CC1Q8TDY2 1594 aa13.78□□□□□ -0.2
CTNNA1-201ENST00000302763 BICRAQ9NZM4 1560 aa13.68□□□□□ -0.22
CTNNA1-201ENST00000302763 DCAF8L2P0C7V8 631 aa13.53□□□□□ -0.24
CTNNA1-201ENST00000302763 CECR2Q9BXF3 1484 aa13.47□□□□□ -0.25
CTNNA1-201ENST00000302763 RSF1Q96T23 1441 aaPredicted RBP13.45□□□□□ -0.26
CTNNA1-201ENST00000302763 MROH2BQ7Z745 1585 aa13.44□□□□□ -0.26
CTNNA1-201ENST00000302763 WIZO95785 1651 aa13.38□□□□□ -0.27
CTNNA1-201ENST00000302763 SMARCA4P51532 1647 aa13.37□□□□□ -0.27
CTNNA1-201ENST00000302763 PEG3Q9GZU2 1588 aa13.35□□□□□ -0.27
CTNNA1-201ENST00000302763 EIF4G1Q04637 1599 aaKnown RBP13.34□□□□□ -0.27
CTNNA1-201ENST00000302763 BAZ1AQ9NRL2 1556 aaPredicted RBP13.33□□□□□ -0.27
CTNNA1-201ENST00000302763 TOP2AP11388 1531 aaKnown RBP13.18□□□□□ -0.3
CTNNA1-201ENST00000302763 SUPT5HO00267 1087 aaKnown RBP13.17□□□□□ -0.3
CTNNA1-201ENST00000302763 SMARCA2P51531 1590 aa13.13□□□□□ -0.31
CTNNA1-201ENST00000302763 ATAD2BQ9ULI0 1458 aa13.03□□□□□ -0.32
CTNNA1-201ENST00000302763 PABPN1Q86U42 306 aaKnown RBP eCLIP13.03□□□□□ -0.32
CTNNA1-201ENST00000302763 CCDC88BA6NC98 1476 aa12.99□□□□□ -0.33
CTNNA1-201ENST00000302763 HMGXB3Q12766 1538 aa12.98□□□□□ -0.33
CTNNA1-201ENST00000302763 CHIC1Q5VXU3 224 aa12.94□□□□□ -0.34
CTNNA1-201ENST00000302763 NCAPD3P42695 1498 aa12.91□□□□□ -0.34
CTNNA1-201ENST00000302763 PRDM2Q13029 1718 aa12.88□□□□□ -0.35
CTNNA1-201ENST00000302763 CC2D2AQ9P2K1 1620 aa12.84□□□□□ -0.35
CTNNA1-201ENST00000302763 BAZ1BQ9UIG0 1483 aaKnown RBP12.81□□□□□ -0.36
CTNNA1-201ENST00000302763 ABCC8Q09428 1581 aa12.77□□□□□ -0.37
CTNNA1-201ENST00000302763 SYNJ1O43426 1573 aa12.72□□□□□ -0.37
CTNNA1-201ENST00000302763 BIVM-ERCC5R4GMW8 1640 aa12.71□□□□□ -0.37
CTNNA1-201ENST00000302763 CFTRP13569 1480 aa12.67□□□□□ -0.38
CTNNA1-201ENST00000302763 TOP2BQ02880 1626 aa12.64□□□□□ -0.39
CTNNA1-201ENST00000302763 CUX1P39880 1505 aa12.57□□□□□ -0.4
CTNNA1-201ENST00000302763 RUSC2Q8N2Y8 1516 aa12.52□□□□□ -0.41
CTNNA1-201ENST00000302763 WDR97A6NE52 1622 aa12.5□□□□□ -0.41
CTNNA1-201ENST00000302763 WRNQ14191 1432 aaPredicted RBP eCLIP12.5□□□□□ -0.41
CTNNA1-201ENST00000302763 DNAJC5BQ9UF47 199 aa12.48□□□□□ -0.41
CTNNA1-201ENST00000302763 SOGA1O94964 1423 aa12.47□□□□□ -0.41
CTNNA1-201ENST00000302763 LAMC3Q9Y6N6 1575 aa12.47□□□□□ -0.41
CTNNA1-201ENST00000302763 KIF21AQ7Z4S6 1674 aa12.46□□□□□ -0.42
CTNNA1-201ENST00000302763 CADPSQ9ULU8 1353 aa12.44□□□□□ -0.42
CTNNA1-201ENST00000302763 NESP48681 1621 aa12.43□□□□□ -0.42
CTNNA1-201ENST00000302763 KIF21BO75037 1637 aa12.43□□□□□ -0.42
CTNNA1-201ENST00000302763 TRIM41Q8WV44 630 aa12.39□□□□□ -0.43
CTNNA1-201ENST00000302763 LOC105371045A0A1W2PR82 267 aa12.37□□□□□ -0.43
CTNNA1-201ENST00000302763 DNMBPQ6XZF7 1577 aa12.36□□□□□ -0.43
CTNNA1-201ENST00000302763 URB2Q14146 1524 aaKnown RBP12.34□□□□□ -0.43
CTNNA1-201ENST00000302763 FANCD2Q9BXW9 1451 aa12.34□□□□□ -0.43
CTNNA1-201ENST00000302763 EHMT2Q96KQ7 1210 aa12.33□□□□□ -0.44
CTNNA1-201ENST00000302763 EEA1Q15075 1411 aa12.33□□□□□ -0.44
CTNNA1-201ENST00000302763 TARBP1Q13395 1621 aaKnown RBP12.31□□□□□ -0.44
CTNNA1-201ENST00000302763 PRXQ9BXM0 1461 aa12.31□□□□□ -0.44
CTNNA1-201ENST00000302763 TOPBP1Q92547 1522 aa12.3□□□□□ -0.44
CTNNA1-201ENST00000302763 ABCA5Q8WWZ7 1642 aa12.3□□□□□ -0.44
CTNNA1-201ENST00000302763 ERICH3Q5RHP9 1530 aa12.28□□□□□ -0.44
CTNNA1-201ENST00000302763 FGD5Q6ZNL6 1462 aa12.27□□□□□ -0.44
CTNNA1-201ENST00000302763 THOC2Q8NI27 1593 aaKnown RBP12.26□□□□□ -0.45
CTNNA1-201ENST00000302763 POLA1P09884 1462 aaPredicted RBP12.25□□□□□ -0.45
CTNNA1-201ENST00000302763 ABCA10Q8WWZ4 1543 aa12.24□□□□□ -0.45
CTNNA1-201ENST00000302763 RAPGEF2Q9Y4G8 1499 aa12.23□□□□□ -0.45
CTNNA1-201ENST00000302763 WDR62O43379 1518 aa12.22□□□□□ -0.45
CTNNA1-201ENST00000302763 CEP164Q9UPV0 1460 aa12.2□□□□□ -0.46
CTNNA1-201ENST00000302763 TNIKQ9UKE5 1360 aa12.18□□□□□ -0.46
CTNNA1-201ENST00000302763 GOLGA3Q08378 1498 aa12.18□□□□□ -0.46
CTNNA1-201ENST00000302763 CUX2O14529 1486 aa12.17□□□□□ -0.46
CTNNA1-201ENST00000302763 PBRM1Q86U86 1689 aa12.17□□□□□ -0.46
CTNNA1-201ENST00000302763 RAD54L2Q9Y4B4 1467 aa12.15□□□□□ -0.46
CTNNA1-201ENST00000302763 CUL7Q14999 1698 aa12.14□□□□□ -0.47
CTNNA1-201ENST00000302763 IGF1RP08069 1367 aa12.13□□□□□ -0.47
CTNNA1-201ENST00000302763 CSRNP3Q8WYN3 585 aa12.13□□□□□ -0.47
CTNNA1-201ENST00000302763 CEP162Q5TB80 1403 aa12.12□□□□□ -0.47
CTNNA1-201ENST00000302763 CTTNBP2Q8WZ74 1663 aa12.12□□□□□ -0.47
CTNNA1-201ENST00000302763 PDS5BQ9NTI5 1447 aa12.1□□□□□ -0.47
CTNNA1-201ENST00000302763 MRC2Q9UBG0 1479 aa12.09□□□□□ -0.47
CTNNA1-201ENST00000302763 FAM9AQ8IZU1 332 aaPredicted RBP12.09□□□□□ -0.47
CTNNA1-201ENST00000302763 KIF27Q86VH2 1401 aa12.09□□□□□ -0.47
CTNNA1-201ENST00000302763 ARAP1Q96P48 1450 aa12.08□□□□□ -0.48
CTNNA1-201ENST00000302763 LRRIQ1Q96JM4 1722 aa12.07□□□□□ -0.48
CTNNA1-201ENST00000302763 ADAMTS12P58397 1594 aa12.04□□□□□ -0.48
CTNNA1-201ENST00000302763 PCGF6Q9BYE7 350 aa12.03□□□□□ -0.48
CTNNA1-201ENST00000302763 SAMD9Q5K651 1589 aa12.02□□□□□ -0.48
CTNNA1-201ENST00000302763 EIF4G3O43432 1585 aaKnown RBP12.02□□□□□ -0.48
CTNNA1-201ENST00000302763 ARHGAP35Q9NRY4 1499 aa12.01□□□□□ -0.49
CTNNA1-201ENST00000302763 ZNF608Q9ULD9 1512 aaPredicted RBP11.98□□□□□ -0.49
CTNNA1-201ENST00000302763 GAPVD1Q14C86 1478 aa11.95□□□□□ -0.5
CTNNA1-201ENST00000302763 CLIP1P30622 1438 aa11.95□□□□□ -0.5
CTNNA1-201ENST00000302763 IFT140Q96RY7 1462 aa11.94□□□□□ -0.5
CTNNA1-201ENST00000302763 CFAP43Q8NDM7 1665 aa11.94□□□□□ -0.5
CTNNA1-201ENST00000302763 VPS8Q8N3P4 1428 aa11.93□□□□□ -0.5
CTNNA1-201ENST00000302763 CARMIL1Q5VZK9 1371 aa11.92□□□□□ -0.5
CTNNA1-201ENST00000302763 TTBK1Q5TCY1 1321 aaPredicted RBP11.89□□□□□ -0.51
CTNNA1-201ENST00000302763 AQRO60306 1485 aaKnown RBP eCLIP11.88□□□□□ -0.519e-7■■■■□ 24.9
CTNNA1-201ENST00000302763 SNAPC4Q5SXM2 1469 aa11.88□□□□□ -0.51
CTNNA1-201ENST00000302763 TDRD9Q8NDG6 1382 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 247.6 ms