RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 NISCHQ9Y2I1 1504 aa28.59■■■□□ 2.17
CTNNA1-234ENST00000522227 ABCC9O60706 1549 aa26.96■■□□□ 1.91
CTNNA1-234ENST00000522227 DNAJC5BQ9UF47 199 aa26.05■■□□□ 1.76
CTNNA1-234ENST00000522227 CCDC180Q9P1Z9 1646 aa25.92■■□□□ 1.74
CTNNA1-234ENST00000522227 RB1CC1Q8TDY2 1594 aa25.14■■□□□ 1.62
CTNNA1-234ENST00000522227 PABPN1Q86U42 306 aaKnown RBP eCLIP25.05■■□□□ 1.6
CTNNA1-234ENST00000522227 DCAF8L2P0C7V8 631 aa24.79■■□□□ 1.56
CTNNA1-234ENST00000522227 NACADO15069 1562 aa24.72■■□□□ 1.55
CTNNA1-234ENST00000522227 UNC13AQ9UPW8 1703 aa24.58■■□□□ 1.53
CTNNA1-234ENST00000522227 BICRAQ9NZM4 1560 aa24.46■■□□□ 1.51
CTNNA1-234ENST00000522227 DNAJC5Q9H3Z4 198 aa24.44■■□□□ 1.5
CTNNA1-234ENST00000522227 CECR2Q9BXF3 1484 aa24.31■■□□□ 1.48
CTNNA1-234ENST00000522227 CC2D2AQ9P2K1 1620 aa24.22■■□□□ 1.47
CTNNA1-234ENST00000522227 MYO15BQ96JP2 1530 aa24■■□□□ 1.43
CTNNA1-234ENST00000522227 EIF4G1Q04637 1599 aaKnown RBP23.94■■□□□ 1.42
CTNNA1-234ENST00000522227 SHROOM4Q9ULL8 1493 aa23.87■■□□□ 1.41
CTNNA1-234ENST00000522227 SCRIBQ14160 1630 aa23.76■■□□□ 1.39
CTNNA1-234ENST00000522227 ZCCHC6Q5VYS8 1495 aaKnown RBP23.49■■□□□ 1.35
CTNNA1-234ENST00000522227 DCAF1Q9Y4B6 1507 aa23.43■■□□□ 1.34
CTNNA1-234ENST00000522227 CUX2O14529 1486 aa23.42■■□□□ 1.34
CTNNA1-234ENST00000522227 ERCC6Q03468 1493 aa23.32■■□□□ 1.32
CTNNA1-234ENST00000522227 TRIM41Q8WV44 630 aa23.23■■□□□ 1.31
CTNNA1-234ENST00000522227 NESP48681 1621 aa22.92■■□□□ 1.26
CTNNA1-234ENST00000522227 NCAPD3P42695 1498 aa22.85■■□□□ 1.25
CTNNA1-234ENST00000522227 THOC2Q8NI27 1593 aaKnown RBP22.73■■□□□ 1.23
CTNNA1-234ENST00000522227 ATAD2BQ9ULI0 1458 aa22.73■■□□□ 1.23
CTNNA1-234ENST00000522227 SMARCA2P51531 1590 aa22.68■■□□□ 1.22
CTNNA1-234ENST00000522227 HMGXB3Q12766 1538 aa22.58■■□□□ 1.21
CTNNA1-234ENST00000522227 KIF21AQ7Z4S6 1674 aa22.52■■□□□ 1.2
CTNNA1-234ENST00000522227 BAZ1BQ9UIG0 1483 aaKnown RBP22.49■■□□□ 1.19
CTNNA1-234ENST00000522227 SMARCA4P51532 1647 aa22.48■■□□□ 1.19
CTNNA1-234ENST00000522227 LAMC3Q9Y6N6 1575 aa22.47■■□□□ 1.19
CTNNA1-234ENST00000522227 PDS5BQ9NTI5 1447 aa22.42■■□□□ 1.18
CTNNA1-234ENST00000522227 BAZ1AQ9NRL2 1556 aaPredicted RBP22.34■■□□□ 1.17
CTNNA1-234ENST00000522227 OSCARQ8IYS5 282 aa22.32■■□□□ 1.16
CTNNA1-234ENST00000522227 MRC2Q9UBG0 1479 aa22.29■■□□□ 1.16
CTNNA1-234ENST00000522227 WDR62O43379 1518 aa22.21■■□□□ 1.15
CTNNA1-234ENST00000522227 CADPSQ9ULU8 1353 aa22.18■■□□□ 1.14
CTNNA1-234ENST00000522227 PEG3Q9GZU2 1588 aa22.16■■□□□ 1.14
CTNNA1-234ENST00000522227 RIMBP3CA6NJZ7 1639 aa22.1■■□□□ 1.13
CTNNA1-234ENST00000522227 RIMBP3BA6NNM3 1639 aa22.1■■□□□ 1.13
CTNNA1-234ENST00000522227 RIMBP3Q9UFD9 1639 aa22.1■■□□□ 1.13
CTNNA1-234ENST00000522227 MROH2BQ7Z745 1585 aa22.08■■□□□ 1.13
CTNNA1-234ENST00000522227 CEP164Q9UPV0 1460 aa22.06■■□□□ 1.12
CTNNA1-234ENST00000522227 TRHP20396 242 aaPredicted RBP22.03■■□□□ 1.12
CTNNA1-234ENST00000522227 AEBP2Q6ZN18 517 aaPredicted RBP21.99■■□□□ 1.11
CTNNA1-234ENST00000522227 FANCD2Q9BXW9 1451 aa21.96■■□□□ 1.11
CTNNA1-234ENST00000522227 CYB5RLQ6IPT4 315 aa21.95■■□□□ 1.1
CTNNA1-234ENST00000522227 ARHGEF11O15085 1522 aa21.94■■□□□ 1.1
CTNNA1-234ENST00000522227 URB2Q14146 1524 aaKnown RBP21.84■■□□□ 1.09
CTNNA1-234ENST00000522227 WIZO95785 1651 aa21.79■■□□□ 1.08
CTNNA1-234ENST00000522227 ZNF608Q9ULD9 1512 aaPredicted RBP21.75■■□□□ 1.07
CTNNA1-234ENST00000522227 CFTRP13569 1480 aa21.71■■□□□ 1.07
CTNNA1-234ENST00000522227 ARAP1Q96P48 1450 aa21.68■■□□□ 1.06
CTNNA1-234ENST00000522227 IFT140Q96RY7 1462 aa21.61■■□□□ 1.05
CTNNA1-234ENST00000522227 FBLN2P98095 1184 aa21.6■■□□□ 1.05
CTNNA1-234ENST00000522227 CHD1O14646 1710 aa21.54■■□□□ 1.04
CTNNA1-234ENST00000522227 EIF4G3O43432 1585 aaKnown RBP21.52■■□□□ 1.04
CTNNA1-234ENST00000522227 AQRO60306 1485 aaKnown RBP eCLIP21.46■■□□□ 1.034e-6■■□□□ 13.8
CTNNA1-234ENST00000522227 RSF1Q96T23 1441 aaPredicted RBP21.45■■□□□ 1.02
CTNNA1-234ENST00000522227 TOPBP1Q92547 1522 aa21.45■■□□□ 1.02
CTNNA1-234ENST00000522227 TOP2AP11388 1531 aaKnown RBP21.39■■□□□ 1.01
CTNNA1-234ENST00000522227 PRDM2Q13029 1718 aa21.38■■□□□ 1.01
CTNNA1-234ENST00000522227 TARBP1Q13395 1621 aaKnown RBP21.27■■□□□ 1
CTNNA1-234ENST00000522227 ABCC8Q09428 1581 aa21.25■□□□□ 0.99
CTNNA1-234ENST00000522227 DNMBPQ6XZF7 1577 aa21.25■□□□□ 0.99
CTNNA1-234ENST00000522227 TDRD9Q8NDG6 1382 aaKnown RBP21.23■□□□□ 0.99
CTNNA1-234ENST00000522227 CLASP1Q7Z460 1538 aa21.21■□□□□ 0.99
CTNNA1-234ENST00000522227 CHMP7Q8WUX9 453 aaPredicted RBP21.21■□□□□ 0.99
CTNNA1-234ENST00000522227 CCDC88BA6NC98 1476 aa21.2■□□□□ 0.98
CTNNA1-234ENST00000522227 SNAPC4Q5SXM2 1469 aa21.19■□□□□ 0.98
CTNNA1-234ENST00000522227 RAD54L2Q9Y4B4 1467 aa21.19■□□□□ 0.98
CTNNA1-234ENST00000522227 POLA1P09884 1462 aaPredicted RBP21.16■□□□□ 0.98
CTNNA1-234ENST00000522227 SYNJ1O43426 1573 aa21.14■□□□□ 0.98
CTNNA1-234ENST00000522227 ILDR1Q86SU0 546 aaPredicted RBP21.12■□□□□ 0.97
CTNNA1-234ENST00000522227 GAPVD1Q14C86 1478 aa21.12■□□□□ 0.97
CTNNA1-234ENST00000522227 SOGA1O94964 1423 aa21.1■□□□□ 0.97
CTNNA1-234ENST00000522227 MAGI1Q96QZ7 1491 aaPredicted RBP21■□□□□ 0.95
CTNNA1-234ENST00000522227 SYNJ2O15056 1496 aa20.97■□□□□ 0.95
CTNNA1-234ENST00000522227 GRIN2BQ13224 1484 aa20.96■□□□□ 0.95
CTNNA1-234ENST00000522227 FGD5Q6ZNL6 1462 aa20.94■□□□□ 0.94
CTNNA1-234ENST00000522227 ERCC6L2Q5T890 1561 aa20.93■□□□□ 0.94
CTNNA1-234ENST00000522227 WDR97A6NE52 1622 aa20.87■□□□□ 0.93
CTNNA1-234ENST00000522227 KDM4FA0A1W2PPD8 638 aa20.85■□□□□ 0.93
CTNNA1-234ENST00000522227 KIF13AQ9H1H9 1805 aa20.83■□□□□ 0.93
CTNNA1-234ENST00000522227 PBRM1Q86U86 1689 aa20.82■□□□□ 0.92
CTNNA1-234ENST00000522227 CUX1P39880 1505 aa20.78■□□□□ 0.92
CTNNA1-234ENST00000522227 FAM69CQ0P6D2 419 aa20.76■□□□□ 0.91
CTNNA1-234ENST00000522227 CEP170Q5SW79 1584 aa20.76■□□□□ 0.91
CTNNA1-234ENST00000522227 GRIN2AQ12879 1464 aa20.69■□□□□ 0.9
CTNNA1-234ENST00000522227 KDM6BO15054 1643 aa20.62■□□□□ 0.89
CTNNA1-234ENST00000522227 ABCA5Q8WWZ7 1642 aa20.62■□□□□ 0.89
CTNNA1-234ENST00000522227 ABCC10Q5T3U5 1492 aa20.62■□□□□ 0.89
CTNNA1-234ENST00000522227 NUP160Q12769 1436 aa20.61■□□□□ 0.89
CTNNA1-234ENST00000522227 NPM1P06748 294 aaKnown RBP eCLIP20.61■□□□□ 0.89
CTNNA1-234ENST00000522227 SHROOM2Q13796 1616 aa20.59■□□□□ 0.89
CTNNA1-234ENST00000522227 PRG4Q92954 1404 aaPredicted RBP20.59■□□□□ 0.89
CTNNA1-234ENST00000522227 ABCA10Q8WWZ4 1543 aa20.58■□□□□ 0.89
CTNNA1-234ENST00000522227 ADAMTS12P58397 1594 aa20.56■□□□□ 0.88
CTNNA1-234ENST00000522227 TSPOAP1O95153 1857 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms