RNA–Protein interactions for RNA: ENST00000637624.1

PXN-222, Transcript of paxillin, humanhuman

TSL 2

Gene PXN, Length 4,132 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-222ENST00000637624 NISCHQ9Y2I1 1504 aa23.66■■□□□ 1.38
PXN-222ENST00000637624 DCAF8L2P0C7V8 631 aa20.88■□□□□ 0.93
PXN-222ENST00000637624 CCDC180Q9P1Z9 1646 aa20.42■□□□□ 0.86
PXN-222ENST00000637624 ABCC9O60706 1549 aa20.14■□□□□ 0.81
PXN-222ENST00000637624 SUPT5HO00267 1087 aaKnown RBP20.04■□□□□ 0.8
PXN-222ENST00000637624 SHROOM4Q9ULL8 1493 aa20.03■□□□□ 0.8
PXN-222ENST00000637624 PCGF6Q9BYE7 350 aa19.88■□□□□ 0.77
PXN-222ENST00000637624 PELP1Q8IZL8 1130 aaKnown RBP19.77■□□□□ 0.76
PXN-222ENST00000637624 ZCCHC6Q5VYS8 1495 aaKnown RBP19.75■□□□□ 0.75
PXN-222ENST00000637624 HRCP23327 699 aa19.65■□□□□ 0.74
PXN-222ENST00000637624 PPARGC1BQ86YN6 1023 aaKnown RBP19.48■□□□□ 0.71
PXN-222ENST00000637624 DCAF1Q9Y4B6 1507 aa19.31■□□□□ 0.68
PXN-222ENST00000637624 NACADO15069 1562 aa19.29■□□□□ 0.68
PXN-222ENST00000637624 RB1CC1Q8TDY2 1594 aa19.26■□□□□ 0.67
PXN-222ENST00000637624 MYT1Q01538 1121 aa19.21■□□□□ 0.67
PXN-222ENST00000637624 EHMT2Q96KQ7 1210 aa19.2■□□□□ 0.66
PXN-222ENST00000637624 PABPN1Q86U42 306 aaKnown RBP eCLIP19.18■□□□□ 0.66
PXN-222ENST00000637624 SCRIBQ14160 1630 aa19.18■□□□□ 0.66
PXN-222ENST00000637624 MYO15BQ96JP2 1530 aa19.12■□□□□ 0.65
PXN-222ENST00000637624 ZEB1P37275 1124 aaPredicted RBP18.98■□□□□ 0.63
PXN-222ENST00000637624 CENPBP07199 599 aaPredicted RBP18.97■□□□□ 0.63
PXN-222ENST00000637624 TRIM26Q12899 539 aaPredicted RBP18.81■□□□□ 0.6
PXN-222ENST00000637624 FAM9AQ8IZU1 332 aaPredicted RBP18.79■□□□□ 0.6
PXN-222ENST00000637624 CHIC1Q5VXU3 224 aa18.75■□□□□ 0.59
PXN-222ENST00000637624 LOC105371045A0A1W2PR82 267 aa18.75■□□□□ 0.59
PXN-222ENST00000637624 YTHDC1Q96MU7 727 aaKnown RBP18.72■□□□□ 0.59
PXN-222ENST00000637624 CCER1Q8TC90 406 aaPredicted RBP18.69■□□□□ 0.58
PXN-222ENST00000637624 TTBK1Q5TCY1 1321 aaPredicted RBP18.65■□□□□ 0.58
PXN-222ENST00000637624 SCAF1Q9H7N4 1312 aaKnown RBP18.59■□□□□ 0.57
PXN-222ENST00000637624 GTF3C3Q9Y5Q9 886 aa18.56■□□□□ 0.56
PXN-222ENST00000637624 CECR2Q9BXF3 1484 aa18.54■□□□□ 0.56
PXN-222ENST00000637624 UNC13AQ9UPW8 1703 aa18.48■□□□□ 0.55
PXN-222ENST00000637624 BICRAQ9NZM4 1560 aa18.47■□□□□ 0.55
PXN-222ENST00000637624 ACIN1Q9UKV3 1341 aaKnown RBP18.4■□□□□ 0.54
PXN-222ENST00000637624 RSF1Q96T23 1441 aaPredicted RBP18.39■□□□□ 0.54
PXN-222ENST00000637624 DIEXFQ68CQ4 756 aaKnown RBP18.34■□□□□ 0.53
PXN-222ENST00000637624 TRIM41Q8WV44 630 aa18.34■□□□□ 0.53
PXN-222ENST00000637624 MROH2BQ7Z745 1585 aa18.33■□□□□ 0.53
PXN-222ENST00000637624 BAZ1AQ9NRL2 1556 aaPredicted RBP18.31■□□□□ 0.52
PXN-222ENST00000637624 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.3■□□□□ 0.52
PXN-222ENST00000637624 NEUROD1Q13562 356 aa18.26■□□□□ 0.51
PXN-222ENST00000637624 RANGAP1P46060 587 aaPredicted RBP18.25■□□□□ 0.51
PXN-222ENST00000637624 SMARCA4P51532 1647 aa18.16■□□□□ 0.5
PXN-222ENST00000637624 ERICH6Q7L0X2 663 aa18.15■□□□□ 0.5
PXN-222ENST00000637624 WIZO95785 1651 aa18.12■□□□□ 0.49
PXN-222ENST00000637624 EIF4G1Q04637 1599 aaKnown RBP18.11■□□□□ 0.49
PXN-222ENST00000637624 BAZ1BQ9UIG0 1483 aaKnown RBP18.07■□□□□ 0.48
PXN-222ENST00000637624 ATAD2BQ9ULI0 1458 aa18.06■□□□□ 0.48
PXN-222ENST00000637624 SMARCA2P51531 1590 aa18■□□□□ 0.47
PXN-222ENST00000637624 APLP2Q06481 763 aa17.95■□□□□ 0.46
PXN-222ENST00000637624 DNAJC5BQ9UF47 199 aa17.93■□□□□ 0.46
PXN-222ENST00000637624 CC2D2AQ9P2K1 1620 aa17.91■□□□□ 0.46
PXN-222ENST00000637624 NEFLP07196 543 aa17.9■□□□□ 0.46
PXN-222ENST00000637624 TOP2AP11388 1531 aaKnown RBP17.89■□□□□ 0.45
PXN-222ENST00000637624 NCAPD3P42695 1498 aa17.87■□□□□ 0.45
PXN-222ENST00000637624 CCDC88BA6NC98 1476 aa17.85■□□□□ 0.45
PXN-222ENST00000637624 BCANQ96GW7 911 aa17.81■□□□□ 0.44
PXN-222ENST00000637624 HNRNPUL2Q1KMD3 747 aaKnown RBP17.78■□□□□ 0.44
PXN-222ENST00000637624 ZNF316A6NFI3 1004 aaPredicted RBP17.77■□□□□ 0.44
PXN-222ENST00000637624 UBTFP17480 764 aaKnown RBP17.77■□□□□ 0.44
PXN-222ENST00000637624 PEG3Q9GZU2 1588 aa17.74■□□□□ 0.43
PXN-222ENST00000637624 HMGXB3Q12766 1538 aa17.7■□□□□ 0.42
PXN-222ENST00000637624 ATP1B4Q9UN42 357 aaPredicted RBP17.65■□□□□ 0.42
PXN-222ENST00000637624 BCL11AQ9H165 835 aa17.6■□□□□ 0.41
PXN-222ENST00000637624 CADPSQ9ULU8 1353 aa17.59■□□□□ 0.41
PXN-222ENST00000637624 MIER1Q8N108 512 aa17.57■□□□□ 0.4
PXN-222ENST00000637624 ANP32EQ9BTT0 268 aa17.52■□□□□ 0.4
PXN-222ENST00000637624 NESP48681 1621 aa17.49■□□□□ 0.39
PXN-222ENST00000637624 ABCC8Q09428 1581 aa17.46■□□□□ 0.38
PXN-222ENST00000637624 WRNQ14191 1432 aaPredicted RBP eCLIP17.45■□□□□ 0.38
PXN-222ENST00000637624 CFTRP13569 1480 aa17.43■□□□□ 0.38
PXN-222ENST00000637624 PDS5BQ9NTI5 1447 aa17.41■□□□□ 0.38
PXN-222ENST00000637624 ERCC6Q03468 1493 aa17.4■□□□□ 0.38
PXN-222ENST00000637624 ITGAEP38570 1179 aa17.4■□□□□ 0.38
PXN-222ENST00000637624 FANCD2Q9BXW9 1451 aa17.37■□□□□ 0.37
PXN-222ENST00000637624 FKBP8Q14318 412 aa17.37■□□□□ 0.37
PXN-222ENST00000637624 RTL5Q5HYW3 569 aaPredicted RBP17.3■□□□□ 0.36
PXN-222ENST00000637624 CEP164Q9UPV0 1460 aa17.3■□□□□ 0.36
PXN-222ENST00000637624 CLSPNQ9HAW4 1339 aa17.3■□□□□ 0.36
PXN-222ENST00000637624 CSRNP3Q8WYN3 585 aa17.27■□□□□ 0.35
PXN-222ENST00000637624 SUPT16HQ9Y5B9 1047 aaKnown RBP17.26■□□□□ 0.35
PXN-222ENST00000637624 CDK11AQ9UQ88 783 aaPredicted RBP17.25■□□□□ 0.35
PXN-222ENST00000637624 LAMC3Q9Y6N6 1575 aa17.24■□□□□ 0.35
PXN-222ENST00000637624 SOGA1O94964 1423 aa17.18■□□□□ 0.34
PXN-222ENST00000637624 SYNJ1O43426 1573 aa17.14■□□□□ 0.33
PXN-222ENST00000637624 TSHZ2Q9NRE2 1034 aa17.13■□□□□ 0.33
PXN-222ENST00000637624 CNGB1Q14028 1251 aaPredicted RBP17.12■□□□□ 0.33
PXN-222ENST00000637624 CUX1P39880 1505 aa17.12■□□□□ 0.33
PXN-222ENST00000637624 NBR1Q14596 966 aa17.1■□□□□ 0.33
PXN-222ENST00000637624 CUX2O14529 1486 aa17.09■□□□□ 0.33
PXN-222ENST00000637624 FGD5Q6ZNL6 1462 aa17.09■□□□□ 0.33
PXN-222ENST00000637624 FBLN2P98095 1184 aa17.09■□□□□ 0.33
PXN-222ENST00000637624 TRIM52Q96A61 297 aa17.09■□□□□ 0.33
PXN-222ENST00000637624 TDRD9Q8NDG6 1382 aaKnown RBP17.08■□□□□ 0.33
PXN-222ENST00000637624 TOPBP1Q92547 1522 aa17.07■□□□□ 0.32
PXN-222ENST00000637624 KIF27Q86VH2 1401 aa17.07■□□□□ 0.32
PXN-222ENST00000637624 RAD54L2Q9Y4B4 1467 aa17.07■□□□□ 0.32
PXN-222ENST00000637624 RUSC2Q8N2Y8 1516 aa17.06■□□□□ 0.32
PXN-222ENST00000637624 MRC2Q9UBG0 1479 aa17.06■□□□□ 0.32
PXN-222ENST00000637624 EIF5BO60841 1220 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms