RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 NISCHQ9Y2I1 1504 aa21.9■■□□□ 1.1
CTNNA1-215ENST00000519309 ABCC9O60706 1549 aa20.06■□□□□ 0.8
CTNNA1-215ENST00000519309 CCDC180Q9P1Z9 1646 aa19.95■□□□□ 0.78
CTNNA1-215ENST00000519309 RB1CC1Q8TDY2 1594 aa19.06■□□□□ 0.64
CTNNA1-215ENST00000519309 DNAJC5BQ9UF47 199 aa19.04■□□□□ 0.64
CTNNA1-215ENST00000519309 NACADO15069 1562 aa18.86■□□□□ 0.61
CTNNA1-215ENST00000519309 UNC13AQ9UPW8 1703 aa18.7■□□□□ 0.58
CTNNA1-215ENST00000519309 MYO15BQ96JP2 1530 aa18.55■□□□□ 0.56
CTNNA1-215ENST00000519309 BICRAQ9NZM4 1560 aa18.54■□□□□ 0.56
CTNNA1-215ENST00000519309 PABPN1Q86U42 306 aaKnown RBP eCLIP18.49■□□□□ 0.55
CTNNA1-215ENST00000519309 SHROOM4Q9ULL8 1493 aa18.35■□□□□ 0.53
CTNNA1-215ENST00000519309 DCAF8L2P0C7V8 631 aa18.29■□□□□ 0.52
CTNNA1-215ENST00000519309 CC2D2AQ9P2K1 1620 aa18.2■□□□□ 0.5
CTNNA1-215ENST00000519309 DCAF1Q9Y4B6 1507 aa18.17■□□□□ 0.5
CTNNA1-215ENST00000519309 CECR2Q9BXF3 1484 aa18.14■□□□□ 0.5
CTNNA1-215ENST00000519309 ZCCHC6Q5VYS8 1495 aaKnown RBP18.14■□□□□ 0.49
CTNNA1-215ENST00000519309 EIF4G1Q04637 1599 aaKnown RBP18.09■□□□□ 0.49
CTNNA1-215ENST00000519309 SCRIBQ14160 1630 aa18.01■□□□□ 0.47
CTNNA1-215ENST00000519309 DNAJC5Q9H3Z4 198 aa17.78■□□□□ 0.44
CTNNA1-215ENST00000519309 CUX2O14529 1486 aa17.55■□□□□ 0.4
CTNNA1-215ENST00000519309 NCAPD3P42695 1498 aa17.37■□□□□ 0.37
CTNNA1-215ENST00000519309 ERCC6Q03468 1493 aa17.35■□□□□ 0.37
CTNNA1-215ENST00000519309 HMGXB3Q12766 1538 aa17.3■□□□□ 0.36
CTNNA1-215ENST00000519309 ATAD2BQ9ULI0 1458 aa17.25■□□□□ 0.35
CTNNA1-215ENST00000519309 SMARCA2P51531 1590 aa17.23■□□□□ 0.35
CTNNA1-215ENST00000519309 SMARCA4P51532 1647 aa17.21■□□□□ 0.35
CTNNA1-215ENST00000519309 THOC2Q8NI27 1593 aaKnown RBP17.2■□□□□ 0.34
CTNNA1-215ENST00000519309 NESP48681 1621 aa17.15■□□□□ 0.34
CTNNA1-215ENST00000519309 PEG3Q9GZU2 1588 aa17.11■□□□□ 0.33
CTNNA1-215ENST00000519309 LAMC3Q9Y6N6 1575 aa17.09■□□□□ 0.33
CTNNA1-215ENST00000519309 BAZ1AQ9NRL2 1556 aaPredicted RBP17.06■□□□□ 0.32
CTNNA1-215ENST00000519309 BAZ1BQ9UIG0 1483 aaKnown RBP17.05■□□□□ 0.32
CTNNA1-215ENST00000519309 KIF21AQ7Z4S6 1674 aa17.03■□□□□ 0.32
CTNNA1-215ENST00000519309 PDS5BQ9NTI5 1447 aa16.9■□□□□ 0.3
CTNNA1-215ENST00000519309 WDR62O43379 1518 aa16.86■□□□□ 0.29
CTNNA1-215ENST00000519309 MROH2BQ7Z745 1585 aa16.85■□□□□ 0.29
CTNNA1-215ENST00000519309 MRC2Q9UBG0 1479 aa16.83■□□□□ 0.28
CTNNA1-215ENST00000519309 CADPSQ9ULU8 1353 aa16.77■□□□□ 0.27
CTNNA1-215ENST00000519309 TRIM41Q8WV44 630 aa16.74■□□□□ 0.27
CTNNA1-215ENST00000519309 CEP164Q9UPV0 1460 aa16.68■□□□□ 0.26
CTNNA1-215ENST00000519309 WIZO95785 1651 aa16.64■□□□□ 0.25
CTNNA1-215ENST00000519309 FANCD2Q9BXW9 1451 aa16.61■□□□□ 0.25
CTNNA1-215ENST00000519309 CFTRP13569 1480 aa16.56■□□□□ 0.24
CTNNA1-215ENST00000519309 PRDM2Q13029 1718 aa16.53■□□□□ 0.24
CTNNA1-215ENST00000519309 URB2Q14146 1524 aaKnown RBP16.52■□□□□ 0.24
CTNNA1-215ENST00000519309 RIMBP3CA6NJZ7 1639 aa16.5■□□□□ 0.23
CTNNA1-215ENST00000519309 RIMBP3BA6NNM3 1639 aa16.5■□□□□ 0.23
CTNNA1-215ENST00000519309 RIMBP3Q9UFD9 1639 aa16.5■□□□□ 0.23
CTNNA1-215ENST00000519309 OSCARQ8IYS5 282 aa16.49■□□□□ 0.23
CTNNA1-215ENST00000519309 TOP2AP11388 1531 aaKnown RBP16.46■□□□□ 0.23
CTNNA1-215ENST00000519309 ARHGEF11O15085 1522 aa16.4■□□□□ 0.22
CTNNA1-215ENST00000519309 IFT140Q96RY7 1462 aa16.35■□□□□ 0.21
CTNNA1-215ENST00000519309 RSF1Q96T23 1441 aaPredicted RBP16.34■□□□□ 0.21
CTNNA1-215ENST00000519309 ZNF608Q9ULD9 1512 aaPredicted RBP16.33■□□□□ 0.2
CTNNA1-215ENST00000519309 EIF4G3O43432 1585 aaKnown RBP16.33■□□□□ 0.2
CTNNA1-215ENST00000519309 TOPBP1Q92547 1522 aa16.27■□□□□ 0.2
CTNNA1-215ENST00000519309 CHD1O14646 1710 aa16.27■□□□□ 0.19
CTNNA1-215ENST00000519309 DNMBPQ6XZF7 1577 aa16.23■□□□□ 0.19
CTNNA1-215ENST00000519309 ABCC8Q09428 1581 aa16.21■□□□□ 0.19
CTNNA1-215ENST00000519309 TARBP1Q13395 1621 aaKnown RBP16.21■□□□□ 0.19
CTNNA1-215ENST00000519309 ARAP1Q96P48 1450 aa16.21■□□□□ 0.19
CTNNA1-215ENST00000519309 CCDC88BA6NC98 1476 aa16.17■□□□□ 0.18
CTNNA1-215ENST00000519309 WDR97A6NE52 1622 aa16.1■□□□□ 0.17
CTNNA1-215ENST00000519309 AQRO60306 1485 aaKnown RBP eCLIP16.09■□□□□ 0.173e-6■■■□□ 17.2
CTNNA1-215ENST00000519309 POLA1P09884 1462 aaPredicted RBP16.09■□□□□ 0.17
CTNNA1-215ENST00000519309 CLASP1Q7Z460 1538 aa16.09■□□□□ 0.17
CTNNA1-215ENST00000519309 CYB5RLQ6IPT4 315 aa16.08■□□□□ 0.16
CTNNA1-215ENST00000519309 SYNJ1O43426 1573 aa16■□□□□ 0.15
CTNNA1-215ENST00000519309 TRHP20396 242 aaPredicted RBP15.99■□□□□ 0.15
CTNNA1-215ENST00000519309 SNAPC4Q5SXM2 1469 aa15.98■□□□□ 0.15
CTNNA1-215ENST00000519309 MAGI1Q96QZ7 1491 aaPredicted RBP15.97■□□□□ 0.15
CTNNA1-215ENST00000519309 RAD54L2Q9Y4B4 1467 aa15.96■□□□□ 0.14
CTNNA1-215ENST00000519309 FGD5Q6ZNL6 1462 aa15.92■□□□□ 0.14
CTNNA1-215ENST00000519309 FBLN2P98095 1184 aa15.91■□□□□ 0.14
CTNNA1-215ENST00000519309 SOGA1O94964 1423 aa15.91■□□□□ 0.14
CTNNA1-215ENST00000519309 PBRM1Q86U86 1689 aa15.9■□□□□ 0.14
CTNNA1-215ENST00000519309 SYNJ2O15056 1496 aa15.9■□□□□ 0.14
CTNNA1-215ENST00000519309 TDRD9Q8NDG6 1382 aaKnown RBP15.89■□□□□ 0.13
CTNNA1-215ENST00000519309 GRIN2BQ13224 1484 aa15.89■□□□□ 0.13
CTNNA1-215ENST00000519309 CUX1P39880 1505 aa15.87■□□□□ 0.13
CTNNA1-215ENST00000519309 GAPVD1Q14C86 1478 aa15.84■□□□□ 0.13
CTNNA1-215ENST00000519309 ABCA5Q8WWZ7 1642 aa15.83■□□□□ 0.13
CTNNA1-215ENST00000519309 CHMP7Q8WUX9 453 aaPredicted RBP15.79■□□□□ 0.12
CTNNA1-215ENST00000519309 AEBP2Q6ZN18 517 aaPredicted RBP15.78■□□□□ 0.12
CTNNA1-215ENST00000519309 ABCA10Q8WWZ4 1543 aa15.76■□□□□ 0.11
CTNNA1-215ENST00000519309 SHROOM2Q13796 1616 aa15.73■□□□□ 0.11
CTNNA1-215ENST00000519309 ERCC6L2Q5T890 1561 aa15.73■□□□□ 0.11
CTNNA1-215ENST00000519309 ADAMTS12P58397 1594 aa15.72■□□□□ 0.11
CTNNA1-215ENST00000519309 GRIN2AQ12879 1464 aa15.71■□□□□ 0.11
CTNNA1-215ENST00000519309 CEP170Q5SW79 1584 aa15.7■□□□□ 0.1
CTNNA1-215ENST00000519309 KIF13AQ9H1H9 1805 aa15.7■□□□□ 0.1
CTNNA1-215ENST00000519309 NUP160Q12769 1436 aa15.68■□□□□ 0.1
CTNNA1-215ENST00000519309 BIVM-ERCC5R4GMW8 1640 aa15.61■□□□□ 0.09
CTNNA1-215ENST00000519309 ERICH3Q5RHP9 1530 aa15.57■□□□□ 0.08
CTNNA1-215ENST00000519309 FHAD1B1AJZ9 1412 aa15.56■□□□□ 0.08
CTNNA1-215ENST00000519309 TOP2BQ02880 1626 aa15.56■□□□□ 0.08
CTNNA1-215ENST00000519309 WRNQ14191 1432 aaPredicted RBP eCLIP15.55■□□□□ 0.08
CTNNA1-215ENST00000519309 MAPKBP1O60336 1514 aa15.53■□□□□ 0.08
CTNNA1-215ENST00000519309 RUSC2Q8N2Y8 1516 aa15.53■□□□□ 0.08
CTNNA1-215ENST00000519309 DIP2BQ9P265 1576 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms