RNA–Protein interactions for RNA: ENST00000517980.5

CTNNA1-206, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-206ENST00000517980 NISCHQ9Y2I1 1504 aa43.03■■■■■ 4.48
CTNNA1-206ENST00000517980 ABCC9O60706 1549 aa38.55■■■■□ 3.76
CTNNA1-206ENST00000517980 CCDC180Q9P1Z9 1646 aa38.45■■■■□ 3.75
CTNNA1-206ENST00000517980 RB1CC1Q8TDY2 1594 aa36.61■■■■□ 3.45
CTNNA1-206ENST00000517980 DCAF8L2P0C7V8 631 aa36.57■■■■□ 3.44
CTNNA1-206ENST00000517980 NACADO15069 1562 aa36.37■■■■□ 3.41
CTNNA1-206ENST00000517980 DNAJC5BQ9UF47 199 aa36.18■■■■□ 3.38
CTNNA1-206ENST00000517980 PABPN1Q86U42 306 aaKnown RBP eCLIP36.03■■■■□ 3.36
CTNNA1-206ENST00000517980 UNC13AQ9UPW8 1703 aa35.87■■■■□ 3.33
CTNNA1-206ENST00000517980 MYO15BQ96JP2 1530 aa35.82■■■■□ 3.32
CTNNA1-206ENST00000517980 ZCCHC6Q5VYS8 1495 aaKnown RBP35.63■■■■□ 3.29
CTNNA1-206ENST00000517980 BICRAQ9NZM4 1560 aa35.59■■■■□ 3.29
CTNNA1-206ENST00000517980 DCAF1Q9Y4B6 1507 aa35.44■■■■□ 3.26
CTNNA1-206ENST00000517980 SCRIBQ14160 1630 aa35.2■■■■□ 3.23
CTNNA1-206ENST00000517980 SHROOM4Q9ULL8 1493 aa34.9■■■■□ 3.18
CTNNA1-206ENST00000517980 CC2D2AQ9P2K1 1620 aa34.77■■■■□ 3.16
CTNNA1-206ENST00000517980 EIF4G1Q04637 1599 aaKnown RBP34.68■■■■□ 3.14
CTNNA1-206ENST00000517980 CECR2Q9BXF3 1484 aa34.65■■■■□ 3.14
CTNNA1-206ENST00000517980 NCAPD3P42695 1498 aa33.62■■■□□ 2.97
CTNNA1-206ENST00000517980 ATAD2BQ9ULI0 1458 aa33.56■■■□□ 2.96
CTNNA1-206ENST00000517980 SMARCA4P51532 1647 aa33.53■■■□□ 2.96
CTNNA1-206ENST00000517980 SMARCA2P51531 1590 aa33.41■■■□□ 2.94
CTNNA1-206ENST00000517980 BAZ1AQ9NRL2 1556 aaPredicted RBP33.34■■■□□ 2.93
CTNNA1-206ENST00000517980 HMGXB3Q12766 1538 aa33.3■■■□□ 2.92
CTNNA1-206ENST00000517980 BAZ1BQ9UIG0 1483 aaKnown RBP33.23■■■□□ 2.91
CTNNA1-206ENST00000517980 ERCC6Q03468 1493 aa33.22■■■□□ 2.91
CTNNA1-206ENST00000517980 MROH2BQ7Z745 1585 aa33.21■■■□□ 2.91
CTNNA1-206ENST00000517980 NESP48681 1621 aa33.17■■■□□ 2.9
CTNNA1-206ENST00000517980 PEG3Q9GZU2 1588 aa33.13■■■□□ 2.89
CTNNA1-206ENST00000517980 DNAJC5Q9H3Z4 198 aa33.04■■■□□ 2.88
CTNNA1-206ENST00000517980 CUX2O14529 1486 aa33.02■■■□□ 2.88
CTNNA1-206ENST00000517980 WIZO95785 1651 aa32.85■■■□□ 2.85
CTNNA1-206ENST00000517980 LAMC3Q9Y6N6 1575 aa32.8■■■□□ 2.84
CTNNA1-206ENST00000517980 KIF21AQ7Z4S6 1674 aa32.68■■■□□ 2.82
CTNNA1-206ENST00000517980 PDS5BQ9NTI5 1447 aa32.66■■■□□ 2.82
CTNNA1-206ENST00000517980 THOC2Q8NI27 1593 aaKnown RBP32.66■■■□□ 2.82
CTNNA1-206ENST00000517980 CADPSQ9ULU8 1353 aa32.65■■■□□ 2.82
CTNNA1-206ENST00000517980 RSF1Q96T23 1441 aaPredicted RBP32.56■■■□□ 2.8
CTNNA1-206ENST00000517980 MRC2Q9UBG0 1479 aa32.35■■■□□ 2.77
CTNNA1-206ENST00000517980 TOP2AP11388 1531 aaKnown RBP32.33■■■□□ 2.77
CTNNA1-206ENST00000517980 FANCD2Q9BXW9 1451 aa32.27■■■□□ 2.76
CTNNA1-206ENST00000517980 CEP164Q9UPV0 1460 aa32.26■■■□□ 2.75
CTNNA1-206ENST00000517980 CFTRP13569 1480 aa32.25■■■□□ 2.75
CTNNA1-206ENST00000517980 WDR62O43379 1518 aa32.23■■■□□ 2.75
CTNNA1-206ENST00000517980 CCDC88BA6NC98 1476 aa32.07■■■□□ 2.72
CTNNA1-206ENST00000517980 URB2Q14146 1524 aaKnown RBP32■■■□□ 2.71
CTNNA1-206ENST00000517980 PRDM2Q13029 1718 aa31.91■■■□□ 2.7
CTNNA1-206ENST00000517980 TRIM41Q8WV44 630 aa31.75■■■□□ 2.67
CTNNA1-206ENST00000517980 OSCARQ8IYS5 282 aa31.71■■■□□ 2.67
CTNNA1-206ENST00000517980 TOPBP1Q92547 1522 aa31.66■■■□□ 2.66
CTNNA1-206ENST00000517980 ZNF608Q9ULD9 1512 aaPredicted RBP31.63■■■□□ 2.65
CTNNA1-206ENST00000517980 IFT140Q96RY7 1462 aa31.59■■■□□ 2.65
CTNNA1-206ENST00000517980 ABCC8Q09428 1581 aa31.54■■■□□ 2.64
CTNNA1-206ENST00000517980 DNMBPQ6XZF7 1577 aa31.51■■■□□ 2.63
CTNNA1-206ENST00000517980 SUPT5HO00267 1087 aaKnown RBP31.42■■■□□ 2.62
CTNNA1-206ENST00000517980 AQRO60306 1485 aaKnown RBP eCLIP31.4■■■□□ 2.624e-6■■□□□ 13.8
CTNNA1-206ENST00000517980 EIF4G3O43432 1585 aaKnown RBP31.36■■■□□ 2.61
CTNNA1-206ENST00000517980 TARBP1Q13395 1621 aaKnown RBP31.35■■■□□ 2.61
CTNNA1-206ENST00000517980 POLA1P09884 1462 aaPredicted RBP31.34■■■□□ 2.61
CTNNA1-206ENST00000517980 RAD54L2Q9Y4B4 1467 aa31.32■■■□□ 2.6
CTNNA1-206ENST00000517980 SOGA1O94964 1423 aa31.27■■■□□ 2.6
CTNNA1-206ENST00000517980 FBLN2P98095 1184 aa31.26■■■□□ 2.59
CTNNA1-206ENST00000517980 TDRD9Q8NDG6 1382 aaKnown RBP31.24■■■□□ 2.59
CTNNA1-206ENST00000517980 RIMBP3CA6NJZ7 1639 aa31.2■■■□□ 2.59
CTNNA1-206ENST00000517980 RIMBP3BA6NNM3 1639 aa31.2■■■□□ 2.59
CTNNA1-206ENST00000517980 RIMBP3Q9UFD9 1639 aa31.2■■■□□ 2.59
CTNNA1-206ENST00000517980 CUX1P39880 1505 aa31.19■■■□□ 2.58
CTNNA1-206ENST00000517980 FGD5Q6ZNL6 1462 aa31.18■■■□□ 2.58
CTNNA1-206ENST00000517980 CHD1O14646 1710 aa31.17■■■□□ 2.58
CTNNA1-206ENST00000517980 ARHGEF11O15085 1522 aa31.09■■■□□ 2.57
CTNNA1-206ENST00000517980 CYB5RLQ6IPT4 315 aa31.04■■■□□ 2.56
CTNNA1-206ENST00000517980 SNAPC4Q5SXM2 1469 aa31■■■□□ 2.55
CTNNA1-206ENST00000517980 CHMP7Q8WUX9 453 aaPredicted RBP30.98■■■□□ 2.55
CTNNA1-206ENST00000517980 GRIN2BQ13224 1484 aa30.91■■■□□ 2.54
CTNNA1-206ENST00000517980 WDR97A6NE52 1622 aa30.91■■■□□ 2.54
CTNNA1-206ENST00000517980 GAPVD1Q14C86 1478 aa30.85■■■□□ 2.53
CTNNA1-206ENST00000517980 MAGI1Q96QZ7 1491 aaPredicted RBP30.85■■■□□ 2.53
CTNNA1-206ENST00000517980 ARAP1Q96P48 1450 aa30.82■■■□□ 2.52
CTNNA1-206ENST00000517980 PBRM1Q86U86 1689 aa30.8■■■□□ 2.52
CTNNA1-206ENST00000517980 ABCA10Q8WWZ4 1543 aa30.78■■■□□ 2.52
CTNNA1-206ENST00000517980 SYNJ2O15056 1496 aa30.77■■■□□ 2.52
CTNNA1-206ENST00000517980 CLASP1Q7Z460 1538 aa30.74■■■□□ 2.51
CTNNA1-206ENST00000517980 SYNJ1O43426 1573 aa30.74■■■□□ 2.51
CTNNA1-206ENST00000517980 WRNQ14191 1432 aaPredicted RBP eCLIP30.73■■■□□ 2.51
CTNNA1-206ENST00000517980 ABCA5Q8WWZ7 1642 aa30.71■■■□□ 2.51
CTNNA1-206ENST00000517980 TOP2BQ02880 1626 aa30.66■■■□□ 2.5
CTNNA1-206ENST00000517980 TRHP20396 242 aaPredicted RBP30.66■■■□□ 2.5
CTNNA1-206ENST00000517980 BIVM-ERCC5R4GMW8 1640 aa30.65■■■□□ 2.5
CTNNA1-206ENST00000517980 GRIN2AQ12879 1464 aa30.5■■■□□ 2.47
CTNNA1-206ENST00000517980 ADAMTS12P58397 1594 aa30.46■■■□□ 2.47
CTNNA1-206ENST00000517980 FHAD1B1AJZ9 1412 aa30.43■■■□□ 2.46
CTNNA1-206ENST00000517980 CEP170Q5SW79 1584 aa30.41■■■□□ 2.46
CTNNA1-206ENST00000517980 ERCC6L2Q5T890 1561 aa30.4■■■□□ 2.46
CTNNA1-206ENST00000517980 ERICH3Q5RHP9 1530 aa30.38■■■□□ 2.45
CTNNA1-206ENST00000517980 NUP160Q12769 1436 aa30.38■■■□□ 2.45
CTNNA1-206ENST00000517980 JPH4Q96JJ6 628 aa30.23■■■□□ 2.43
CTNNA1-206ENST00000517980 SHROOM2Q13796 1616 aa30.21■■■□□ 2.43
CTNNA1-206ENST00000517980 PRG4Q92954 1404 aaPredicted RBP30.16■■■□□ 2.42
CTNNA1-206ENST00000517980 IGF1RP08069 1367 aa30.15■■■□□ 2.42
CTNNA1-206ENST00000517980 KIF27Q86VH2 1401 aa30.1■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms