Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC29.69■■■□□ 2.34
PCDHAC2Q9Y5I4 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
PCDHAC2Q9Y5I4 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC29.68■■■□□ 2.34
PCDHAC2Q9Y5I4 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
PCDHAC2Q9Y5I4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
PCDHAC2Q9Y5I4 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC29.68■■■□□ 2.34
PCDHAC2Q9Y5I4 AC139795.1-202ENST00000500444 432 ntBASIC29.68■■■□□ 2.34
PCDHAC2Q9Y5I4 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
PCDHAC2Q9Y5I4 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
PCDHAC2Q9Y5I4 AC009299.2-201ENST00000482477 511 ntBASIC29.67■■■□□ 2.34
PCDHAC2Q9Y5I4 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
PCDHAC2Q9Y5I4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC29.67■■■□□ 2.34
PCDHAC2Q9Y5I4 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC29.66■■■□□ 2.34
PCDHAC2Q9Y5I4 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
PCDHAC2Q9Y5I4 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC29.65■■■□□ 2.34
PCDHAC2Q9Y5I4 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC29.65■■■□□ 2.34
PCDHAC2Q9Y5I4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
PCDHAC2Q9Y5I4 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
PCDHAC2Q9Y5I4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
PCDHAC2Q9Y5I4 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
PCDHAC2Q9Y5I4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
PCDHAC2Q9Y5I4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
PCDHAC2Q9Y5I4 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC29.64■■■□□ 2.34
PCDHAC2Q9Y5I4 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
PCDHAC2Q9Y5I4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC29.63■■■□□ 2.33
PCDHAC2Q9Y5I4 AC018755.3-202ENST00000596210 929 ntBASIC29.63■■■□□ 2.33
PCDHAC2Q9Y5I4 AC074183.2-201ENST00000623112 922 ntBASIC29.63■■■□□ 2.33
PCDHAC2Q9Y5I4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
PCDHAC2Q9Y5I4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC29.62■■■□□ 2.33
PCDHAC2Q9Y5I4 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC29.62■■■□□ 2.33
PCDHAC2Q9Y5I4 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
PCDHAC2Q9Y5I4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
PCDHAC2Q9Y5I4 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
PCDHAC2Q9Y5I4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC29.61■■■□□ 2.33
PCDHAC2Q9Y5I4 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
PCDHAC2Q9Y5I4 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
PCDHAC2Q9Y5I4 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
PCDHAC2Q9Y5I4 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC29.6■■■□□ 2.33
PCDHAC2Q9Y5I4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
PCDHAC2Q9Y5I4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC29.59■■■□□ 2.33
PCDHAC2Q9Y5I4 WHAMMP3-201ENST00000611636 1609 ntBASIC29.59■■■□□ 2.33
PCDHAC2Q9Y5I4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
PCDHAC2Q9Y5I4 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC29.58■■■□□ 2.33
PCDHAC2Q9Y5I4 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC29.58■■■□□ 2.33
PCDHAC2Q9Y5I4 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC29.57■■■□□ 2.32
PCDHAC2Q9Y5I4 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC29.57■■■□□ 2.32
PCDHAC2Q9Y5I4 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC29.57■■■□□ 2.32
PCDHAC2Q9Y5I4 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
PCDHAC2Q9Y5I4 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
PCDHAC2Q9Y5I4 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
PCDHAC2Q9Y5I4 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
PCDHAC2Q9Y5I4 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC29.56■■■□□ 2.32
PCDHAC2Q9Y5I4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
PCDHAC2Q9Y5I4 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC29.56■■■□□ 2.32
PCDHAC2Q9Y5I4 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC29.55■■■□□ 2.32
PCDHAC2Q9Y5I4 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
PCDHAC2Q9Y5I4 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC29.55■■■□□ 2.32
PCDHAC2Q9Y5I4 YBX1P4-201ENST00000392794 808 ntBASIC29.55■■■□□ 2.32
PCDHAC2Q9Y5I4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC29.55■■■□□ 2.32
PCDHAC2Q9Y5I4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC29.55■■■□□ 2.32
PCDHAC2Q9Y5I4 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC29.54■■■□□ 2.32
PCDHAC2Q9Y5I4 ST7-202ENST00000323984 2142 ntTSL 5 BASIC29.54■■■□□ 2.32
PCDHAC2Q9Y5I4 ST7-207ENST00000393449 2127 ntTSL 5 BASIC29.54■■■□□ 2.32
PCDHAC2Q9Y5I4 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
PCDHAC2Q9Y5I4 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC29.54■■■□□ 2.32
PCDHAC2Q9Y5I4 IDNK-201ENST00000376417 511 ntTSL 5 BASIC29.53■■■□□ 2.32
PCDHAC2Q9Y5I4 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
PCDHAC2Q9Y5I4 AL592295.1-201ENST00000400984 884 ntBASIC29.53■■■□□ 2.32
PCDHAC2Q9Y5I4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC29.53■■■□□ 2.32
PCDHAC2Q9Y5I4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC29.53■■■□□ 2.32
PCDHAC2Q9Y5I4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC29.53■■■□□ 2.32
PCDHAC2Q9Y5I4 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC29.53■■■□□ 2.32
PCDHAC2Q9Y5I4 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
PCDHAC2Q9Y5I4 MIR4508-201ENST00000584178 70 ntBASIC29.52■■■□□ 2.32
PCDHAC2Q9Y5I4 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
PCDHAC2Q9Y5I4 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
PCDHAC2Q9Y5I4 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC29.52■■■□□ 2.32
PCDHAC2Q9Y5I4 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
PCDHAC2Q9Y5I4 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
PCDHAC2Q9Y5I4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC29.51■■■□□ 2.32
PCDHAC2Q9Y5I4 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
PCDHAC2Q9Y5I4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC29.51■■■□□ 2.32
PCDHAC2Q9Y5I4 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC29.51■■■□□ 2.31
PCDHAC2Q9Y5I4 HYI-210ENST00000486909 905 ntTSL 5 BASIC29.51■■■□□ 2.31
PCDHAC2Q9Y5I4 AC103724.3-201ENST00000564481 992 ntBASIC29.51■■■□□ 2.31
PCDHAC2Q9Y5I4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC29.51■■■□□ 2.31
PCDHAC2Q9Y5I4 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC29.51■■■□□ 2.31
PCDHAC2Q9Y5I4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
PCDHAC2Q9Y5I4 AC139426.1-201ENST00000568218 2529 ntBASIC29.5■■■□□ 2.31
PCDHAC2Q9Y5I4 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC29.5■■■□□ 2.31
PCDHAC2Q9Y5I4 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
PCDHAC2Q9Y5I4 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC29.5■■■□□ 2.31
PCDHAC2Q9Y5I4 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC29.5■■■□□ 2.31
PCDHAC2Q9Y5I4 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
PCDHAC2Q9Y5I4 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC29.49■■■□□ 2.31
PCDHAC2Q9Y5I4 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC29.49■■■□□ 2.31
PCDHAC2Q9Y5I4 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
PCDHAC2Q9Y5I4 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC29.48■■■□□ 2.31
PCDHAC2Q9Y5I4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC29.48■■■□□ 2.31
PCDHAC2Q9Y5I4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC29.48■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms