Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 AC010980.1-201ENST00000587192 1142 ntBASIC30.23■■■□□ 2.43
LEMD3Q9Y2U8 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
LEMD3Q9Y2U8 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
LEMD3Q9Y2U8 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
LEMD3Q9Y2U8 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.22■■■□□ 2.43
LEMD3Q9Y2U8 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
LEMD3Q9Y2U8 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC30.22■■■□□ 2.43
LEMD3Q9Y2U8 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
LEMD3Q9Y2U8 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
LEMD3Q9Y2U8 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC30.21■■■□□ 2.43
LEMD3Q9Y2U8 AC139795.1-202ENST00000500444 432 ntBASIC30.2■■■□□ 2.43
LEMD3Q9Y2U8 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC30.2■■■□□ 2.43
LEMD3Q9Y2U8 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.42
LEMD3Q9Y2U8 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
LEMD3Q9Y2U8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC30.19■■■□□ 2.42
LEMD3Q9Y2U8 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC30.19■■■□□ 2.42
LEMD3Q9Y2U8 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC30.19■■■□□ 2.42
LEMD3Q9Y2U8 HYI-210ENST00000486909 905 ntTSL 5 BASIC30.19■■■□□ 2.42
LEMD3Q9Y2U8 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC30.19■■■□□ 2.42
LEMD3Q9Y2U8 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC30.18■■■□□ 2.42
LEMD3Q9Y2U8 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC30.18■■■□□ 2.42
LEMD3Q9Y2U8 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
LEMD3Q9Y2U8 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
LEMD3Q9Y2U8 IDNK-203ENST00000405990 629 ntTSL 2 BASIC30.17■■■□□ 2.42
LEMD3Q9Y2U8 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
LEMD3Q9Y2U8 AL451085.2-201ENST00000605085 799 ntBASIC30.17■■■□□ 2.42
LEMD3Q9Y2U8 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
LEMD3Q9Y2U8 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC30.16■■■□□ 2.42
LEMD3Q9Y2U8 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
LEMD3Q9Y2U8 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC30.16■■■□□ 2.42
LEMD3Q9Y2U8 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC30.16■■■□□ 2.42
LEMD3Q9Y2U8 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC30.16■■■□□ 2.42
LEMD3Q9Y2U8 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
LEMD3Q9Y2U8 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC30.15■■■□□ 2.42
LEMD3Q9Y2U8 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC30.15■■■□□ 2.42
LEMD3Q9Y2U8 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
LEMD3Q9Y2U8 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC30.15■■■□□ 2.42
LEMD3Q9Y2U8 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC30.15■■■□□ 2.42
LEMD3Q9Y2U8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
LEMD3Q9Y2U8 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
LEMD3Q9Y2U8 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
LEMD3Q9Y2U8 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
LEMD3Q9Y2U8 AL035685.1-201ENST00000636663 812 ntBASIC30.14■■■□□ 2.42
LEMD3Q9Y2U8 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
LEMD3Q9Y2U8 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC30.13■■■□□ 2.41
LEMD3Q9Y2U8 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC30.13■■■□□ 2.41
LEMD3Q9Y2U8 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
LEMD3Q9Y2U8 BEX3-202ENST00000372634 753 ntTSL 2 BASIC30.13■■■□□ 2.41
LEMD3Q9Y2U8 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
LEMD3Q9Y2U8 PVT1_1.1-201ENST00000615125 194 ntBASIC30.13■■■□□ 2.41
LEMD3Q9Y2U8 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
LEMD3Q9Y2U8 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
LEMD3Q9Y2U8 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
LEMD3Q9Y2U8 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
LEMD3Q9Y2U8 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC30.12■■■□□ 2.41
LEMD3Q9Y2U8 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
LEMD3Q9Y2U8 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
LEMD3Q9Y2U8 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
LEMD3Q9Y2U8 AC103834.1-201ENST00000520383 144 ntBASIC30.1■■■□□ 2.41
LEMD3Q9Y2U8 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
LEMD3Q9Y2U8 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
LEMD3Q9Y2U8 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
LEMD3Q9Y2U8 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
LEMD3Q9Y2U8 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC30.09■■■□□ 2.41
LEMD3Q9Y2U8 KRT8P33-201ENST00000508125 1423 ntBASIC30.09■■■□□ 2.41
LEMD3Q9Y2U8 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC30.09■■■□□ 2.41
LEMD3Q9Y2U8 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC30.09■■■□□ 2.41
LEMD3Q9Y2U8 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC30.09■■■□□ 2.41
LEMD3Q9Y2U8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC30.09■■■□□ 2.41
LEMD3Q9Y2U8 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
LEMD3Q9Y2U8 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC30.08■■■□□ 2.41
LEMD3Q9Y2U8 DRD5P2-201ENST00000421395 2012 ntBASIC30.08■■■□□ 2.41
LEMD3Q9Y2U8 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
LEMD3Q9Y2U8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC30.07■■■□□ 2.4
LEMD3Q9Y2U8 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC30.07■■■□□ 2.4
LEMD3Q9Y2U8 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC30.07■■■□□ 2.4
LEMD3Q9Y2U8 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
LEMD3Q9Y2U8 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC30.05■■■□□ 2.4
LEMD3Q9Y2U8 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
LEMD3Q9Y2U8 IDNK-201ENST00000376417 511 ntTSL 5 BASIC30.05■■■□□ 2.4
LEMD3Q9Y2U8 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
LEMD3Q9Y2U8 YBX1P4-201ENST00000392794 808 ntBASIC30.05■■■□□ 2.4
LEMD3Q9Y2U8 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC30.05■■■□□ 2.4
LEMD3Q9Y2U8 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
LEMD3Q9Y2U8 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
LEMD3Q9Y2U8 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
LEMD3Q9Y2U8 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC30.04■■■□□ 2.4
LEMD3Q9Y2U8 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
LEMD3Q9Y2U8 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC30.04■■■□□ 2.4
LEMD3Q9Y2U8 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
LEMD3Q9Y2U8 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
LEMD3Q9Y2U8 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
LEMD3Q9Y2U8 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC30.03■■■□□ 2.4
LEMD3Q9Y2U8 MIR4508-201ENST00000584178 70 ntBASIC30.03■■■□□ 2.4
LEMD3Q9Y2U8 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.03■■■□□ 2.4
LEMD3Q9Y2U8 MTX2-204ENST00000443241 799 ntTSL 3 BASIC30.02■■■□□ 2.4
LEMD3Q9Y2U8 TRIR-205ENST00000592273 783 ntTSL 3 BASIC30.02■■■□□ 2.4
LEMD3Q9Y2U8 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
LEMD3Q9Y2U8 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
LEMD3Q9Y2U8 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms