Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GCM1Q9NP62 ECEL1P2-201ENST00000461596 1295 ntBASIC20.87■□□□□ 0.93
GCM1Q9NP62 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
GCM1Q9NP62 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.86■□□□□ 0.93
GCM1Q9NP62 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
GCM1Q9NP62 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GCM1Q9NP62 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.86■□□□□ 0.93
GCM1Q9NP62 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GCM1Q9NP62 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
GCM1Q9NP62 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.85■□□□□ 0.93
GCM1Q9NP62 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
GCM1Q9NP62 RARRES2P2-201ENST00000394842 485 ntBASIC20.85■□□□□ 0.93
GCM1Q9NP62 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
GCM1Q9NP62 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GCM1Q9NP62 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GCM1Q9NP62 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.84■□□□□ 0.93
GCM1Q9NP62 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GCM1Q9NP62 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GCM1Q9NP62 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
GCM1Q9NP62 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GCM1Q9NP62 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GCM1Q9NP62 AL359504.2-201ENST00000605506 1601 ntBASIC20.82■□□□□ 0.92
GCM1Q9NP62 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.82■□□□□ 0.92
GCM1Q9NP62 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
GCM1Q9NP62 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.82■□□□□ 0.92
GCM1Q9NP62 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.82■□□□□ 0.92
GCM1Q9NP62 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GCM1Q9NP62 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
GCM1Q9NP62 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.81■□□□□ 0.92
GCM1Q9NP62 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GCM1Q9NP62 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GCM1Q9NP62 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.81■□□□□ 0.92
GCM1Q9NP62 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GCM1Q9NP62 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GCM1Q9NP62 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.81■□□□□ 0.92
GCM1Q9NP62 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.8■□□□□ 0.92
GCM1Q9NP62 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
GCM1Q9NP62 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
GCM1Q9NP62 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GCM1Q9NP62 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.8■□□□□ 0.92
GCM1Q9NP62 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GCM1Q9NP62 SMPD5-203ENST00000639008 1464 ntBASIC20.8■□□□□ 0.92
GCM1Q9NP62 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GCM1Q9NP62 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GCM1Q9NP62 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GCM1Q9NP62 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.79■□□□□ 0.92
GCM1Q9NP62 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GCM1Q9NP62 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GCM1Q9NP62 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GCM1Q9NP62 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
GCM1Q9NP62 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.79■□□□□ 0.92
GCM1Q9NP62 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GCM1Q9NP62 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
GCM1Q9NP62 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.78■□□□□ 0.92
GCM1Q9NP62 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
GCM1Q9NP62 AC025884.2-201ENST00000553429 711 ntBASIC20.78■□□□□ 0.92
GCM1Q9NP62 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.78■□□□□ 0.92
GCM1Q9NP62 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
GCM1Q9NP62 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GCM1Q9NP62 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
GCM1Q9NP62 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GCM1Q9NP62 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
GCM1Q9NP62 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.77■□□□□ 0.92
GCM1Q9NP62 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.77■□□□□ 0.92
GCM1Q9NP62 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GCM1Q9NP62 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.76■□□□□ 0.91
GCM1Q9NP62 AP004609.3-201ENST00000610705 1884 ntBASIC20.76■□□□□ 0.91
GCM1Q9NP62 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GCM1Q9NP62 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
GCM1Q9NP62 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.76■□□□□ 0.91
GCM1Q9NP62 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GCM1Q9NP62 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
GCM1Q9NP62 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
GCM1Q9NP62 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.75■□□□□ 0.91
GCM1Q9NP62 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.75■□□□□ 0.91
GCM1Q9NP62 AC142472.1-201ENST00000612013 1741 ntBASIC20.75■□□□□ 0.91
GCM1Q9NP62 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GCM1Q9NP62 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
GCM1Q9NP62 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GCM1Q9NP62 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GCM1Q9NP62 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GCM1Q9NP62 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
GCM1Q9NP62 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.74■□□□□ 0.91
GCM1Q9NP62 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GCM1Q9NP62 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GCM1Q9NP62 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.73■□□□□ 0.91
GCM1Q9NP62 AC007029.1-201ENST00000604183 313 ntBASIC20.73■□□□□ 0.91
GCM1Q9NP62 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
GCM1Q9NP62 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GCM1Q9NP62 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GCM1Q9NP62 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
GCM1Q9NP62 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
GCM1Q9NP62 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GCM1Q9NP62 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.72■□□□□ 0.91
GCM1Q9NP62 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
GCM1Q9NP62 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
GCM1Q9NP62 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GCM1Q9NP62 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
GCM1Q9NP62 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GCM1Q9NP62 ABHD17AP5-201ENST00000580133 923 ntBASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms