Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CDH20Q9HBT6 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDH20Q9HBT6 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDH20Q9HBT6 AC092296.2-201ENST00000589470 999 ntBASIC21.35■■□□□ 1.01
CDH20Q9HBT6 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.35■■□□□ 1.01
CDH20Q9HBT6 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDH20Q9HBT6 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.34■■□□□ 1.01
CDH20Q9HBT6 AL157400.5-201ENST00000507624 621 ntBASIC21.34■■□□□ 1.01
CDH20Q9HBT6 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDH20Q9HBT6 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDH20Q9HBT6 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CDH20Q9HBT6 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDH20Q9HBT6 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDH20Q9HBT6 AP004609.3-201ENST00000610705 1884 ntBASIC21.33■■□□□ 1.01
CDH20Q9HBT6 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDH20Q9HBT6 ECEL1P2-201ENST00000461596 1295 ntBASIC21.33■■□□□ 1.01
CDH20Q9HBT6 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CDH20Q9HBT6 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.33■■□□□ 1
CDH20Q9HBT6 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CDH20Q9HBT6 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDH20Q9HBT6 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDH20Q9HBT6 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.32■■□□□ 1
CDH20Q9HBT6 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDH20Q9HBT6 AC142472.1-201ENST00000612013 1741 ntBASIC21.32■■□□□ 1
CDH20Q9HBT6 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.32■■□□□ 1
CDH20Q9HBT6 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDH20Q9HBT6 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
CDH20Q9HBT6 RNF126P1-201ENST00000567452 1320 ntBASIC21.31■■□□□ 1
CDH20Q9HBT6 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.31■■□□□ 1
CDH20Q9HBT6 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDH20Q9HBT6 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDH20Q9HBT6 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDH20Q9HBT6 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDH20Q9HBT6 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDH20Q9HBT6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.31■■□□□ 1
CDH20Q9HBT6 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.3■■□□□ 1
CDH20Q9HBT6 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CDH20Q9HBT6 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDH20Q9HBT6 AL359504.2-201ENST00000605506 1601 ntBASIC21.3■■□□□ 1
CDH20Q9HBT6 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CDH20Q9HBT6 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CDH20Q9HBT6 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
CDH20Q9HBT6 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDH20Q9HBT6 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDH20Q9HBT6 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDH20Q9HBT6 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDH20Q9HBT6 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDH20Q9HBT6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDH20Q9HBT6 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDH20Q9HBT6 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CDH20Q9HBT6 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.28■■□□□ 1
CDH20Q9HBT6 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.28■■□□□ 1
CDH20Q9HBT6 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.28■■□□□ 1
CDH20Q9HBT6 SMPD5-203ENST00000639008 1464 ntBASIC21.27■■□□□ 1
CDH20Q9HBT6 AL121749.1-202ENST00000609313 2153 ntBASIC21.27■■□□□ 1
CDH20Q9HBT6 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH20Q9HBT6 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDH20Q9HBT6 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.26■□□□□ 0.99
CDH20Q9HBT6 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH20Q9HBT6 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH20Q9HBT6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH20Q9HBT6 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH20Q9HBT6 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.25■□□□□ 0.99
CDH20Q9HBT6 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH20Q9HBT6 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.25■□□□□ 0.99
CDH20Q9HBT6 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CDH20Q9HBT6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH20Q9HBT6 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDH20Q9HBT6 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH20Q9HBT6 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH20Q9HBT6 RARRES2P2-201ENST00000394842 485 ntBASIC21.24■□□□□ 0.99
CDH20Q9HBT6 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.24■□□□□ 0.99
CDH20Q9HBT6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.24■□□□□ 0.99
CDH20Q9HBT6 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.23■□□□□ 0.99
CDH20Q9HBT6 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.23■□□□□ 0.99
CDH20Q9HBT6 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDH20Q9HBT6 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH20Q9HBT6 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDH20Q9HBT6 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH20Q9HBT6 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
CDH20Q9HBT6 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CDH20Q9HBT6 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.22■□□□□ 0.99
CDH20Q9HBT6 AC025884.2-201ENST00000553429 711 ntBASIC21.22■□□□□ 0.99
CDH20Q9HBT6 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.22■□□□□ 0.99
CDH20Q9HBT6 MIR3960-201ENST00000583311 91 ntBASIC21.22■□□□□ 0.99
CDH20Q9HBT6 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH20Q9HBT6 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDH20Q9HBT6 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH20Q9HBT6 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CDH20Q9HBT6 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH20Q9HBT6 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH20Q9HBT6 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.21■□□□□ 0.99
CDH20Q9HBT6 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CDH20Q9HBT6 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
CDH20Q9HBT6 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDH20Q9HBT6 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.2■□□□□ 0.98
CDH20Q9HBT6 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CDH20Q9HBT6 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH20Q9HBT6 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH20Q9HBT6 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms