Protein–RNA interactions for Protein: Q96N87

SLC6A18, Sodium-dependent neutral amino acid transporter B(0)AT3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A18Q96N87 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
SLC6A18Q96N87 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
SLC6A18Q96N87 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SLC6A18Q96N87 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.47■■□□□ 1.51
SLC6A18Q96N87 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SLC6A18Q96N87 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SLC6A18Q96N87 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC24.47■■□□□ 1.51
SLC6A18Q96N87 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
SLC6A18Q96N87 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SLC6A18Q96N87 MIR6765-201ENST00000614092 87 ntBASIC24.46■■□□□ 1.51
SLC6A18Q96N87 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
SLC6A18Q96N87 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
SLC6A18Q96N87 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SLC6A18Q96N87 AL451085.2-201ENST00000605085 799 ntBASIC24.45■■□□□ 1.5
SLC6A18Q96N87 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SLC6A18Q96N87 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC24.45■■□□□ 1.5
SLC6A18Q96N87 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SLC6A18Q96N87 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SLC6A18Q96N87 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SLC6A18Q96N87 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
SLC6A18Q96N87 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.44■■□□□ 1.5
SLC6A18Q96N87 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC24.44■■□□□ 1.5
SLC6A18Q96N87 KRT8P33-201ENST00000508125 1423 ntBASIC24.44■■□□□ 1.5
SLC6A18Q96N87 WHAMMP3-201ENST00000611636 1609 ntBASIC24.43■■□□□ 1.5
SLC6A18Q96N87 AC139795.1-202ENST00000500444 432 ntBASIC24.43■■□□□ 1.5
SLC6A18Q96N87 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
SLC6A18Q96N87 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
SLC6A18Q96N87 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SLC6A18Q96N87 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SLC6A18Q96N87 AC018755.3-202ENST00000596210 929 ntBASIC24.42■■□□□ 1.5
SLC6A18Q96N87 AL035685.1-201ENST00000636663 812 ntBASIC24.42■■□□□ 1.5
SLC6A18Q96N87 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC24.42■■□□□ 1.5
SLC6A18Q96N87 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
SLC6A18Q96N87 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.41■■□□□ 1.5
SLC6A18Q96N87 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC24.41■■□□□ 1.5
SLC6A18Q96N87 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC24.41■■□□□ 1.5
SLC6A18Q96N87 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC24.41■■□□□ 1.5
SLC6A18Q96N87 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
SLC6A18Q96N87 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
SLC6A18Q96N87 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
SLC6A18Q96N87 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SLC6A18Q96N87 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SLC6A18Q96N87 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SLC6A18Q96N87 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC24.4■■□□□ 1.5
SLC6A18Q96N87 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC24.39■■□□□ 1.5
SLC6A18Q96N87 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
SLC6A18Q96N87 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SLC6A18Q96N87 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.39■■□□□ 1.49
SLC6A18Q96N87 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.39■■□□□ 1.49
SLC6A18Q96N87 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SLC6A18Q96N87 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC24.39■■□□□ 1.49
SLC6A18Q96N87 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
SLC6A18Q96N87 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
SLC6A18Q96N87 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SLC6A18Q96N87 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC24.39■■□□□ 1.49
SLC6A18Q96N87 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SLC6A18Q96N87 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SLC6A18Q96N87 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SLC6A18Q96N87 AC074183.2-201ENST00000623112 922 ntBASIC24.38■■□□□ 1.49
SLC6A18Q96N87 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SLC6A18Q96N87 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SLC6A18Q96N87 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC24.37■■□□□ 1.49
SLC6A18Q96N87 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.37■■□□□ 1.49
SLC6A18Q96N87 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SLC6A18Q96N87 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC24.37■■□□□ 1.49
SLC6A18Q96N87 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.37■■□□□ 1.49
SLC6A18Q96N87 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.36■■□□□ 1.49
SLC6A18Q96N87 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SLC6A18Q96N87 HYI-210ENST00000486909 905 ntTSL 5 BASIC24.36■■□□□ 1.49
SLC6A18Q96N87 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.36■■□□□ 1.49
SLC6A18Q96N87 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SLC6A18Q96N87 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SLC6A18Q96N87 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SLC6A18Q96N87 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC24.35■■□□□ 1.49
SLC6A18Q96N87 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC24.35■■□□□ 1.49
SLC6A18Q96N87 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SLC6A18Q96N87 PVT1_1.1-201ENST00000615125 194 ntBASIC24.35■■□□□ 1.49
SLC6A18Q96N87 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.34■■□□□ 1.49
SLC6A18Q96N87 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
SLC6A18Q96N87 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.34■■□□□ 1.49
SLC6A18Q96N87 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SLC6A18Q96N87 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SLC6A18Q96N87 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SLC6A18Q96N87 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SLC6A18Q96N87 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.34■■□□□ 1.49
SLC6A18Q96N87 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SLC6A18Q96N87 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
SLC6A18Q96N87 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC24.33■■□□□ 1.49
SLC6A18Q96N87 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SLC6A18Q96N87 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SLC6A18Q96N87 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
SLC6A18Q96N87 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
SLC6A18Q96N87 AC103834.1-201ENST00000520383 144 ntBASIC24.31■■□□□ 1.48
SLC6A18Q96N87 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.3■■□□□ 1.48
SLC6A18Q96N87 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SLC6A18Q96N87 YBX1P4-201ENST00000392794 808 ntBASIC24.3■■□□□ 1.48
SLC6A18Q96N87 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC24.3■■□□□ 1.48
SLC6A18Q96N87 TRIR-205ENST00000592273 783 ntTSL 3 BASIC24.3■■□□□ 1.48
SLC6A18Q96N87 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SLC6A18Q96N87 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms