Protein–RNA interactions for Protein: Q8NBS3

SLC4A11, Sodium bicarbonate transporter-like protein 11, humanhuman

Predictions only

Length 891 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A11Q8NBS3 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SLC4A11Q8NBS3 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SLC4A11Q8NBS3 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SLC4A11Q8NBS3 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.18■■□□□ 1.78
SLC4A11Q8NBS3 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SLC4A11Q8NBS3 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SLC4A11Q8NBS3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
SLC4A11Q8NBS3 ECEL1P2-201ENST00000461596 1295 ntBASIC26.17■■□□□ 1.78
SLC4A11Q8NBS3 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SLC4A11Q8NBS3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.16■■□□□ 1.78
SLC4A11Q8NBS3 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SLC4A11Q8NBS3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SLC4A11Q8NBS3 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.16■■□□□ 1.78
SLC4A11Q8NBS3 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.15■■□□□ 1.78
SLC4A11Q8NBS3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.15■■□□□ 1.78
SLC4A11Q8NBS3 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.15■■□□□ 1.78
SLC4A11Q8NBS3 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.15■■□□□ 1.78
SLC4A11Q8NBS3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.15■■□□□ 1.78
SLC4A11Q8NBS3 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SLC4A11Q8NBS3 RNF126P1-201ENST00000567452 1320 ntBASIC26.14■■□□□ 1.78
SLC4A11Q8NBS3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SLC4A11Q8NBS3 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
SLC4A11Q8NBS3 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.14■■□□□ 1.78
SLC4A11Q8NBS3 AC025884.2-201ENST00000553429 711 ntBASIC26.14■■□□□ 1.78
SLC4A11Q8NBS3 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
SLC4A11Q8NBS3 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
SLC4A11Q8NBS3 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
SLC4A11Q8NBS3 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.77
SLC4A11Q8NBS3 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.77
SLC4A11Q8NBS3 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
SLC4A11Q8NBS3 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SLC4A11Q8NBS3 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
SLC4A11Q8NBS3 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SLC4A11Q8NBS3 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.13■■□□□ 1.77
SLC4A11Q8NBS3 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SLC4A11Q8NBS3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
SLC4A11Q8NBS3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SLC4A11Q8NBS3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SLC4A11Q8NBS3 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SLC4A11Q8NBS3 SMPD5-203ENST00000639008 1464 ntBASIC26.11■■□□□ 1.77
SLC4A11Q8NBS3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SLC4A11Q8NBS3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.1■■□□□ 1.77
SLC4A11Q8NBS3 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SLC4A11Q8NBS3 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.1■■□□□ 1.77
SLC4A11Q8NBS3 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.1■■□□□ 1.77
SLC4A11Q8NBS3 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.1■■□□□ 1.77
SLC4A11Q8NBS3 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.1■■□□□ 1.77
SLC4A11Q8NBS3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
SLC4A11Q8NBS3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.09■■□□□ 1.77
SLC4A11Q8NBS3 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SLC4A11Q8NBS3 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.09■■□□□ 1.77
SLC4A11Q8NBS3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.09■■□□□ 1.77
SLC4A11Q8NBS3 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.09■■□□□ 1.77
SLC4A11Q8NBS3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SLC4A11Q8NBS3 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
SLC4A11Q8NBS3 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SLC4A11Q8NBS3 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.09■■□□□ 1.77
SLC4A11Q8NBS3 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SLC4A11Q8NBS3 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SLC4A11Q8NBS3 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SLC4A11Q8NBS3 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.07■■□□□ 1.76
SLC4A11Q8NBS3 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.07■■□□□ 1.76
SLC4A11Q8NBS3 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.07■■□□□ 1.76
SLC4A11Q8NBS3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
SLC4A11Q8NBS3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.07■■□□□ 1.76
SLC4A11Q8NBS3 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SLC4A11Q8NBS3 RARRES2P2-201ENST00000394842 485 ntBASIC26.06■■□□□ 1.76
SLC4A11Q8NBS3 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.06■■□□□ 1.76
SLC4A11Q8NBS3 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.06■■□□□ 1.76
SLC4A11Q8NBS3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.06■■□□□ 1.76
SLC4A11Q8NBS3 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.06■■□□□ 1.76
SLC4A11Q8NBS3 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
SLC4A11Q8NBS3 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SLC4A11Q8NBS3 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.05■■□□□ 1.76
SLC4A11Q8NBS3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
SLC4A11Q8NBS3 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SLC4A11Q8NBS3 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.05■■□□□ 1.76
SLC4A11Q8NBS3 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SLC4A11Q8NBS3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
SLC4A11Q8NBS3 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
SLC4A11Q8NBS3 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SLC4A11Q8NBS3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.04■■□□□ 1.76
SLC4A11Q8NBS3 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SLC4A11Q8NBS3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SLC4A11Q8NBS3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.04■■□□□ 1.76
SLC4A11Q8NBS3 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.04■■□□□ 1.76
SLC4A11Q8NBS3 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SLC4A11Q8NBS3 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
SLC4A11Q8NBS3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
SLC4A11Q8NBS3 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SLC4A11Q8NBS3 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SLC4A11Q8NBS3 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.02■■□□□ 1.76
SLC4A11Q8NBS3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
SLC4A11Q8NBS3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
SLC4A11Q8NBS3 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC26.02■■□□□ 1.76
SLC4A11Q8NBS3 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SLC4A11Q8NBS3 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
SLC4A11Q8NBS3 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SLC4A11Q8NBS3 AC007029.1-201ENST00000604183 313 ntBASIC26.01■■□□□ 1.75
SLC4A11Q8NBS3 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms