Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
C3orf56Q8N813 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.34■□□□□ 0.69
C3orf56Q8N813 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
C3orf56Q8N813 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.33■□□□□ 0.68
C3orf56Q8N813 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.33■□□□□ 0.68
C3orf56Q8N813 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.33■□□□□ 0.68
C3orf56Q8N813 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
C3orf56Q8N813 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
C3orf56Q8N813 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
C3orf56Q8N813 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.32■□□□□ 0.68
C3orf56Q8N813 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C3orf56Q8N813 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
C3orf56Q8N813 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
C3orf56Q8N813 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
C3orf56Q8N813 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
C3orf56Q8N813 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.31■□□□□ 0.68
C3orf56Q8N813 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
C3orf56Q8N813 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.31■□□□□ 0.68
C3orf56Q8N813 AC019171.1-201ENST00000601251 1056 ntBASIC19.31■□□□□ 0.68
C3orf56Q8N813 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
C3orf56Q8N813 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC19.3■□□□□ 0.68
C3orf56Q8N813 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
C3orf56Q8N813 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
C3orf56Q8N813 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
C3orf56Q8N813 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.3■□□□□ 0.68
C3orf56Q8N813 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.3■□□□□ 0.68
C3orf56Q8N813 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.29■□□□□ 0.68
C3orf56Q8N813 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
C3orf56Q8N813 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
C3orf56Q8N813 MIR638-201ENST00000385237 100 ntBASIC19.28■□□□□ 0.68
C3orf56Q8N813 BX664725.1-201ENST00000438252 379 ntBASIC19.28■□□□□ 0.68
C3orf56Q8N813 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.28■□□□□ 0.68
C3orf56Q8N813 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
C3orf56Q8N813 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.27■□□□□ 0.68
C3orf56Q8N813 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
C3orf56Q8N813 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
C3orf56Q8N813 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.27■□□□□ 0.68
C3orf56Q8N813 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
C3orf56Q8N813 MIR4787-201ENST00000607364 84 ntBASIC19.27■□□□□ 0.68
C3orf56Q8N813 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
C3orf56Q8N813 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
C3orf56Q8N813 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.26■□□□□ 0.67
C3orf56Q8N813 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
C3orf56Q8N813 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.26■□□□□ 0.67
C3orf56Q8N813 KRT16P3-201ENST00000439127 1283 ntBASIC19.26■□□□□ 0.67
C3orf56Q8N813 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.26■□□□□ 0.67
C3orf56Q8N813 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.26■□□□□ 0.67
C3orf56Q8N813 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.26■□□□□ 0.67
C3orf56Q8N813 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
C3orf56Q8N813 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
C3orf56Q8N813 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C3orf56Q8N813 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
C3orf56Q8N813 AP004833.2-201ENST00000532228 1454 ntBASIC19.25■□□□□ 0.67
C3orf56Q8N813 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C3orf56Q8N813 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.25■□□□□ 0.67
C3orf56Q8N813 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.25■□□□□ 0.67
C3orf56Q8N813 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
C3orf56Q8N813 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C3orf56Q8N813 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
C3orf56Q8N813 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
C3orf56Q8N813 LONRF2P2-201ENST00000439212 571 ntBASIC19.24■□□□□ 0.67
C3orf56Q8N813 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.24■□□□□ 0.67
C3orf56Q8N813 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
C3orf56Q8N813 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
C3orf56Q8N813 AC100797.4-201ENST00000631653 1827 ntBASIC19.23■□□□□ 0.67
C3orf56Q8N813 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
C3orf56Q8N813 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
C3orf56Q8N813 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.23■□□□□ 0.67
C3orf56Q8N813 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.23■□□□□ 0.67
C3orf56Q8N813 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.23■□□□□ 0.67
C3orf56Q8N813 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
C3orf56Q8N813 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
C3orf56Q8N813 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
C3orf56Q8N813 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
C3orf56Q8N813 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
C3orf56Q8N813 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
C3orf56Q8N813 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.22■□□□□ 0.67
C3orf56Q8N813 AL139246.5-201ENST00000606645 996 ntBASIC19.22■□□□□ 0.67
C3orf56Q8N813 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
C3orf56Q8N813 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
C3orf56Q8N813 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
C3orf56Q8N813 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.21■□□□□ 0.67
C3orf56Q8N813 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
C3orf56Q8N813 AC087393.1-201ENST00000582896 145 ntBASIC19.21■□□□□ 0.67
C3orf56Q8N813 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.21■□□□□ 0.67
C3orf56Q8N813 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
C3orf56Q8N813 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
C3orf56Q8N813 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
C3orf56Q8N813 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
C3orf56Q8N813 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.2■□□□□ 0.66
C3orf56Q8N813 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.2■□□□□ 0.66
C3orf56Q8N813 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
C3orf56Q8N813 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
C3orf56Q8N813 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.19■□□□□ 0.66
C3orf56Q8N813 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.19■□□□□ 0.66
C3orf56Q8N813 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C3orf56Q8N813 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C3orf56Q8N813 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
C3orf56Q8N813 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
C3orf56Q8N813 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms