Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
DDX60Q8IY21 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC30.84■■■□□ 2.53
DDX60Q8IY21 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC30.83■■■□□ 2.53
DDX60Q8IY21 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.53
DDX60Q8IY21 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
DDX60Q8IY21 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
DDX60Q8IY21 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
DDX60Q8IY21 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
DDX60Q8IY21 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC30.81■■■□□ 2.52
DDX60Q8IY21 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC30.81■■■□□ 2.52
DDX60Q8IY21 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC30.81■■■□□ 2.52
DDX60Q8IY21 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
DDX60Q8IY21 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC30.81■■■□□ 2.52
DDX60Q8IY21 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
DDX60Q8IY21 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
DDX60Q8IY21 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC30.8■■■□□ 2.52
DDX60Q8IY21 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
DDX60Q8IY21 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC30.8■■■□□ 2.52
DDX60Q8IY21 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC30.8■■■□□ 2.52
DDX60Q8IY21 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC30.79■■■□□ 2.52
DDX60Q8IY21 MIR6765-201ENST00000614092 87 ntBASIC30.79■■■□□ 2.52
DDX60Q8IY21 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC30.78■■■□□ 2.52
DDX60Q8IY21 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC30.78■■■□□ 2.52
DDX60Q8IY21 PVT1_1.1-201ENST00000615125 194 ntBASIC30.78■■■□□ 2.52
DDX60Q8IY21 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC30.78■■■□□ 2.52
DDX60Q8IY21 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC30.77■■■□□ 2.52
DDX60Q8IY21 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
DDX60Q8IY21 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
DDX60Q8IY21 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC30.77■■■□□ 2.52
DDX60Q8IY21 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC30.76■■■□□ 2.52
DDX60Q8IY21 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC30.76■■■□□ 2.51
DDX60Q8IY21 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.51
DDX60Q8IY21 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC30.76■■■□□ 2.51
DDX60Q8IY21 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
DDX60Q8IY21 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
DDX60Q8IY21 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC30.76■■■□□ 2.51
DDX60Q8IY21 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC30.75■■■□□ 2.51
DDX60Q8IY21 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC30.74■■■□□ 2.51
DDX60Q8IY21 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
DDX60Q8IY21 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC30.74■■■□□ 2.51
DDX60Q8IY21 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
DDX60Q8IY21 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
DDX60Q8IY21 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC30.74■■■□□ 2.51
DDX60Q8IY21 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC30.74■■■□□ 2.51
DDX60Q8IY21 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC30.74■■■□□ 2.51
DDX60Q8IY21 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
DDX60Q8IY21 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC30.73■■■□□ 2.51
DDX60Q8IY21 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC30.73■■■□□ 2.51
DDX60Q8IY21 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
DDX60Q8IY21 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC30.73■■■□□ 2.51
DDX60Q8IY21 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
DDX60Q8IY21 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC30.72■■■□□ 2.51
DDX60Q8IY21 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC30.72■■■□□ 2.51
DDX60Q8IY21 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
DDX60Q8IY21 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
DDX60Q8IY21 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
DDX60Q8IY21 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
DDX60Q8IY21 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC30.71■■■□□ 2.51
DDX60Q8IY21 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
DDX60Q8IY21 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
DDX60Q8IY21 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
DDX60Q8IY21 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.51
DDX60Q8IY21 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.5
DDX60Q8IY21 AC010980.1-201ENST00000587192 1142 ntBASIC30.7■■■□□ 2.5
DDX60Q8IY21 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
DDX60Q8IY21 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC30.69■■■□□ 2.5
DDX60Q8IY21 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
DDX60Q8IY21 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC30.69■■■□□ 2.5
DDX60Q8IY21 IDNK-203ENST00000405990 629 ntTSL 2 BASIC30.68■■■□□ 2.5
DDX60Q8IY21 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
DDX60Q8IY21 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC30.68■■■□□ 2.5
DDX60Q8IY21 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
DDX60Q8IY21 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC30.67■■■□□ 2.5
DDX60Q8IY21 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC30.67■■■□□ 2.5
DDX60Q8IY21 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
DDX60Q8IY21 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
DDX60Q8IY21 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
DDX60Q8IY21 AC139795.1-202ENST00000500444 432 ntBASIC30.66■■■□□ 2.5
DDX60Q8IY21 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
DDX60Q8IY21 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC30.66■■■□□ 2.5
DDX60Q8IY21 MIR4508-201ENST00000584178 70 ntBASIC30.65■■■□□ 2.5
DDX60Q8IY21 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC30.65■■■□□ 2.5
DDX60Q8IY21 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
DDX60Q8IY21 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
DDX60Q8IY21 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC30.64■■■□□ 2.5
DDX60Q8IY21 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC30.64■■■□□ 2.5
DDX60Q8IY21 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC30.64■■■□□ 2.5
DDX60Q8IY21 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
DDX60Q8IY21 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC30.64■■■□□ 2.5
DDX60Q8IY21 KRT8P33-201ENST00000508125 1423 ntBASIC30.64■■■□□ 2.5
DDX60Q8IY21 AL035685.1-201ENST00000636663 812 ntBASIC30.64■■■□□ 2.5
DDX60Q8IY21 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC30.64■■■□□ 2.49
DDX60Q8IY21 AL449106.1-201ENST00000608517 1980 ntBASIC30.63■■■□□ 2.49
DDX60Q8IY21 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
DDX60Q8IY21 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC30.63■■■□□ 2.49
DDX60Q8IY21 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC30.63■■■□□ 2.49
DDX60Q8IY21 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC30.63■■■□□ 2.49
DDX60Q8IY21 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
DDX60Q8IY21 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC30.62■■■□□ 2.49
DDX60Q8IY21 LINC01003-201ENST00000564834 1764 ntBASIC30.62■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms