Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
COL23A1Q86Y22 PEMT-206ENST00000435340 960 ntTSL 5 BASIC31.6■■■□□ 2.65
COL23A1Q86Y22 GRAMD4P7-201ENST00000578182 1232 ntBASIC31.6■■■□□ 2.65
COL23A1Q86Y22 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.6■■■□□ 2.65
COL23A1Q86Y22 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
COL23A1Q86Y22 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC31.59■■■□□ 2.65
COL23A1Q86Y22 Z92544.1-202ENST00000571933 1220 ntBASIC31.58■■■□□ 2.65
COL23A1Q86Y22 AC019171.1-201ENST00000601251 1056 ntBASIC31.58■■■□□ 2.65
COL23A1Q86Y22 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC31.58■■■□□ 2.65
COL23A1Q86Y22 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC31.56■■■□□ 2.64
COL23A1Q86Y22 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
COL23A1Q86Y22 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC31.56■■■□□ 2.64
COL23A1Q86Y22 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC31.56■■■□□ 2.64
COL23A1Q86Y22 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
COL23A1Q86Y22 TK2-216ENST00000564917 1156 ntTSL 3 BASIC31.55■■■□□ 2.64
COL23A1Q86Y22 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC31.55■■■□□ 2.64
COL23A1Q86Y22 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
COL23A1Q86Y22 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
COL23A1Q86Y22 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC31.54■■■□□ 2.64
COL23A1Q86Y22 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
COL23A1Q86Y22 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
COL23A1Q86Y22 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
COL23A1Q86Y22 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
COL23A1Q86Y22 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC31.53■■■□□ 2.64
COL23A1Q86Y22 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
COL23A1Q86Y22 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
COL23A1Q86Y22 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
COL23A1Q86Y22 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
COL23A1Q86Y22 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.63
COL23A1Q86Y22 MIR638-201ENST00000385237 100 ntBASIC31.51■■■□□ 2.63
COL23A1Q86Y22 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC31.51■■■□□ 2.63
COL23A1Q86Y22 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.63
COL23A1Q86Y22 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC31.5■■■□□ 2.63
COL23A1Q86Y22 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
COL23A1Q86Y22 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC31.5■■■□□ 2.63
COL23A1Q86Y22 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
COL23A1Q86Y22 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC31.5■■■□□ 2.63
COL23A1Q86Y22 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
COL23A1Q86Y22 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.49■■■□□ 2.63
COL23A1Q86Y22 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
COL23A1Q86Y22 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC31.49■■■□□ 2.63
COL23A1Q86Y22 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC31.49■■■□□ 2.63
COL23A1Q86Y22 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
COL23A1Q86Y22 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC31.48■■■□□ 2.63
COL23A1Q86Y22 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC31.48■■■□□ 2.63
COL23A1Q86Y22 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
COL23A1Q86Y22 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
COL23A1Q86Y22 AC087393.1-201ENST00000582896 145 ntBASIC31.47■■■□□ 2.63
COL23A1Q86Y22 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC31.46■■■□□ 2.63
COL23A1Q86Y22 AL359504.2-201ENST00000605506 1601 ntBASIC31.46■■■□□ 2.63
COL23A1Q86Y22 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
COL23A1Q86Y22 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
COL23A1Q86Y22 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC31.45■■■□□ 2.63
COL23A1Q86Y22 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
COL23A1Q86Y22 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC31.44■■■□□ 2.62
COL23A1Q86Y22 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC31.44■■■□□ 2.62
COL23A1Q86Y22 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC31.44■■■□□ 2.62
COL23A1Q86Y22 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC31.44■■■□□ 2.62
COL23A1Q86Y22 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC31.44■■■□□ 2.62
COL23A1Q86Y22 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
COL23A1Q86Y22 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
COL23A1Q86Y22 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC31.43■■■□□ 2.62
COL23A1Q86Y22 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC31.43■■■□□ 2.62
COL23A1Q86Y22 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
COL23A1Q86Y22 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC31.43■■■□□ 2.62
COL23A1Q86Y22 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC31.42■■■□□ 2.62
COL23A1Q86Y22 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
COL23A1Q86Y22 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC31.41■■■□□ 2.62
COL23A1Q86Y22 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
COL23A1Q86Y22 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
COL23A1Q86Y22 UNC93B8-201ENST00000511903 705 ntBASIC31.4■■■□□ 2.62
COL23A1Q86Y22 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
COL23A1Q86Y22 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
COL23A1Q86Y22 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
COL23A1Q86Y22 LONRF2P2-201ENST00000439212 571 ntBASIC31.39■■■□□ 2.62
COL23A1Q86Y22 MIR4787-201ENST00000607364 84 ntBASIC31.39■■■□□ 2.62
COL23A1Q86Y22 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC31.38■■■□□ 2.61
COL23A1Q86Y22 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC31.38■■■□□ 2.61
COL23A1Q86Y22 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
COL23A1Q86Y22 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
COL23A1Q86Y22 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
COL23A1Q86Y22 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC31.37■■■□□ 2.61
COL23A1Q86Y22 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC31.37■■■□□ 2.61
COL23A1Q86Y22 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC31.37■■■□□ 2.61
COL23A1Q86Y22 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC31.36■■■□□ 2.61
COL23A1Q86Y22 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC31.36■■■□□ 2.61
COL23A1Q86Y22 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
COL23A1Q86Y22 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC31.36■■■□□ 2.61
COL23A1Q86Y22 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC31.36■■■□□ 2.61
COL23A1Q86Y22 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
COL23A1Q86Y22 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC31.35■■■□□ 2.61
COL23A1Q86Y22 KRT125P-201ENST00000546827 989 ntBASIC31.35■■■□□ 2.61
COL23A1Q86Y22 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
COL23A1Q86Y22 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
COL23A1Q86Y22 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
COL23A1Q86Y22 ST7-AS1-201ENST00000456775 1889 ntBASIC31.34■■■□□ 2.61
COL23A1Q86Y22 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC31.34■■■□□ 2.61
COL23A1Q86Y22 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
COL23A1Q86Y22 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
COL23A1Q86Y22 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms