Protein–RNA interactions for Protein: Q6UWI4

SHISA2, Protein shisa-2 homolog, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2Q6UWI4 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHISA2Q6UWI4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SHISA2Q6UWI4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
SHISA2Q6UWI4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.23■□□□□ 0.67
SHISA2Q6UWI4 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHISA2Q6UWI4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHISA2Q6UWI4 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHISA2Q6UWI4 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHISA2Q6UWI4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.22■□□□□ 0.67
SHISA2Q6UWI4 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SHISA2Q6UWI4 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHISA2Q6UWI4 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SHISA2Q6UWI4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.21■□□□□ 0.67
SHISA2Q6UWI4 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.21■□□□□ 0.67
SHISA2Q6UWI4 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.21■□□□□ 0.67
SHISA2Q6UWI4 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHISA2Q6UWI4 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHISA2Q6UWI4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHISA2Q6UWI4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SHISA2Q6UWI4 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHISA2Q6UWI4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHISA2Q6UWI4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHISA2Q6UWI4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.19■□□□□ 0.66
SHISA2Q6UWI4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.19■□□□□ 0.66
SHISA2Q6UWI4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.19■□□□□ 0.66
SHISA2Q6UWI4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.19■□□□□ 0.66
SHISA2Q6UWI4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SHISA2Q6UWI4 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHISA2Q6UWI4 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC19.18■□□□□ 0.66
SHISA2Q6UWI4 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHISA2Q6UWI4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHISA2Q6UWI4 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHISA2Q6UWI4 KRT125P-201ENST00000546827 989 ntBASIC19.18■□□□□ 0.66
SHISA2Q6UWI4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHISA2Q6UWI4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHISA2Q6UWI4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SHISA2Q6UWI4 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.17■□□□□ 0.66
SHISA2Q6UWI4 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SHISA2Q6UWI4 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHISA2Q6UWI4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.16■□□□□ 0.66
SHISA2Q6UWI4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.16■□□□□ 0.66
SHISA2Q6UWI4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.16■□□□□ 0.66
SHISA2Q6UWI4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.16■□□□□ 0.66
SHISA2Q6UWI4 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SHISA2Q6UWI4 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.16■□□□□ 0.66
SHISA2Q6UWI4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHISA2Q6UWI4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.15■□□□□ 0.66
SHISA2Q6UWI4 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SHISA2Q6UWI4 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHISA2Q6UWI4 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SHISA2Q6UWI4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHISA2Q6UWI4 AC100797.4-201ENST00000631653 1827 ntBASIC19.14■□□□□ 0.65
SHISA2Q6UWI4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHISA2Q6UWI4 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SHISA2Q6UWI4 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.13■□□□□ 0.65
SHISA2Q6UWI4 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
SHISA2Q6UWI4 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHISA2Q6UWI4 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHISA2Q6UWI4 BX664725.1-201ENST00000438252 379 ntBASIC19.12■□□□□ 0.65
SHISA2Q6UWI4 AC087393.1-201ENST00000582896 145 ntBASIC19.12■□□□□ 0.65
SHISA2Q6UWI4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.12■□□□□ 0.65
SHISA2Q6UWI4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.12■□□□□ 0.65
SHISA2Q6UWI4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC19.11■□□□□ 0.65
SHISA2Q6UWI4 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.11■□□□□ 0.65
SHISA2Q6UWI4 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHISA2Q6UWI4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.11■□□□□ 0.65
SHISA2Q6UWI4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.11■□□□□ 0.65
SHISA2Q6UWI4 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHISA2Q6UWI4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.11■□□□□ 0.65
SHISA2Q6UWI4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SHISA2Q6UWI4 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHISA2Q6UWI4 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHISA2Q6UWI4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SHISA2Q6UWI4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.1■□□□□ 0.65
SHISA2Q6UWI4 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.1■□□□□ 0.65
SHISA2Q6UWI4 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.1■□□□□ 0.65
SHISA2Q6UWI4 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHISA2Q6UWI4 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SHISA2Q6UWI4 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHISA2Q6UWI4 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SHISA2Q6UWI4 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHISA2Q6UWI4 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHISA2Q6UWI4 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHISA2Q6UWI4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHISA2Q6UWI4 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHISA2Q6UWI4 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHISA2Q6UWI4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.09■□□□□ 0.65
SHISA2Q6UWI4 LONRF2P2-201ENST00000439212 571 ntBASIC19.09■□□□□ 0.65
SHISA2Q6UWI4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.09■□□□□ 0.65
SHISA2Q6UWI4 MIR4787-201ENST00000607364 84 ntBASIC19.09■□□□□ 0.65
SHISA2Q6UWI4 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.09■□□□□ 0.65
SHISA2Q6UWI4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHISA2Q6UWI4 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SHISA2Q6UWI4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
SHISA2Q6UWI4 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SHISA2Q6UWI4 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
SHISA2Q6UWI4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.08■□□□□ 0.64
SHISA2Q6UWI4 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHISA2Q6UWI4 MIR638-201ENST00000385237 100 ntBASIC19.08■□□□□ 0.64
SHISA2Q6UWI4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms