Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 AP004609.3-201ENST00000610705 1884 ntBASIC27.95■■■□□ 2.06
PPP4R3AQ6IN85 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC27.95■■■□□ 2.06
PPP4R3AQ6IN85 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
PPP4R3AQ6IN85 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
PPP4R3AQ6IN85 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC27.94■■■□□ 2.06
PPP4R3AQ6IN85 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
PPP4R3AQ6IN85 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
PPP4R3AQ6IN85 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC27.94■■■□□ 2.06
PPP4R3AQ6IN85 RNF126P1-201ENST00000567452 1320 ntBASIC27.93■■■□□ 2.06
PPP4R3AQ6IN85 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
PPP4R3AQ6IN85 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC27.93■■■□□ 2.06
PPP4R3AQ6IN85 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC27.93■■■□□ 2.06
PPP4R3AQ6IN85 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC27.92■■■□□ 2.06
PPP4R3AQ6IN85 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
PPP4R3AQ6IN85 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC27.92■■■□□ 2.06
PPP4R3AQ6IN85 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
PPP4R3AQ6IN85 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC27.92■■■□□ 2.06
PPP4R3AQ6IN85 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC27.92■■■□□ 2.06
PPP4R3AQ6IN85 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC27.92■■■□□ 2.06
PPP4R3AQ6IN85 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC27.92■■■□□ 2.06
PPP4R3AQ6IN85 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
PPP4R3AQ6IN85 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
PPP4R3AQ6IN85 AC025884.2-201ENST00000553429 711 ntBASIC27.91■■■□□ 2.06
PPP4R3AQ6IN85 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
PPP4R3AQ6IN85 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
PPP4R3AQ6IN85 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
PPP4R3AQ6IN85 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.06
PPP4R3AQ6IN85 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC27.89■■■□□ 2.06
PPP4R3AQ6IN85 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC27.89■■■□□ 2.06
PPP4R3AQ6IN85 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
PPP4R3AQ6IN85 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
PPP4R3AQ6IN85 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC27.87■■■□□ 2.05
PPP4R3AQ6IN85 SMPD5-203ENST00000639008 1464 ntBASIC27.87■■■□□ 2.05
PPP4R3AQ6IN85 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
PPP4R3AQ6IN85 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
PPP4R3AQ6IN85 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
PPP4R3AQ6IN85 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
PPP4R3AQ6IN85 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC27.85■■■□□ 2.05
PPP4R3AQ6IN85 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC27.85■■■□□ 2.05
PPP4R3AQ6IN85 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
PPP4R3AQ6IN85 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
PPP4R3AQ6IN85 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC27.84■■■□□ 2.05
PPP4R3AQ6IN85 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC27.84■■■□□ 2.05
PPP4R3AQ6IN85 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC27.84■■■□□ 2.05
PPP4R3AQ6IN85 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC27.84■■■□□ 2.05
PPP4R3AQ6IN85 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC27.84■■■□□ 2.05
PPP4R3AQ6IN85 REST-210ENST00000638187 1334 ntTSL 5 BASIC27.84■■■□□ 2.05
PPP4R3AQ6IN85 PKM-203ENST00000389093 2279 ntTSL 5 BASIC27.84■■■□□ 2.05
PPP4R3AQ6IN85 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
PPP4R3AQ6IN85 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC27.83■■■□□ 2.05
PPP4R3AQ6IN85 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC27.83■■■□□ 2.05
PPP4R3AQ6IN85 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
PPP4R3AQ6IN85 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC27.83■■■□□ 2.05
PPP4R3AQ6IN85 PFN2-211ENST00000489155 636 ntTSL 4 BASIC27.83■■■□□ 2.05
PPP4R3AQ6IN85 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
PPP4R3AQ6IN85 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC27.82■■■□□ 2.04
PPP4R3AQ6IN85 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC27.82■■■□□ 2.04
PPP4R3AQ6IN85 RARRES2P2-201ENST00000394842 485 ntBASIC27.82■■■□□ 2.04
PPP4R3AQ6IN85 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
PPP4R3AQ6IN85 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC27.81■■■□□ 2.04
PPP4R3AQ6IN85 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
PPP4R3AQ6IN85 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
PPP4R3AQ6IN85 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC27.81■■■□□ 2.04
PPP4R3AQ6IN85 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC27.81■■■□□ 2.04
PPP4R3AQ6IN85 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC27.81■■■□□ 2.04
PPP4R3AQ6IN85 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC27.81■■■□□ 2.04
PPP4R3AQ6IN85 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC27.8■■■□□ 2.04
PPP4R3AQ6IN85 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC27.8■■■□□ 2.04
PPP4R3AQ6IN85 BRD4-212ENST00000630599 726 ntTSL 2 BASIC27.8■■■□□ 2.04
PPP4R3AQ6IN85 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
PPP4R3AQ6IN85 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
PPP4R3AQ6IN85 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
PPP4R3AQ6IN85 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC27.79■■■□□ 2.04
PPP4R3AQ6IN85 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
PPP4R3AQ6IN85 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC27.79■■■□□ 2.04
PPP4R3AQ6IN85 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC27.79■■■□□ 2.04
PPP4R3AQ6IN85 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
PPP4R3AQ6IN85 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC27.78■■■□□ 2.04
PPP4R3AQ6IN85 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
PPP4R3AQ6IN85 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
PPP4R3AQ6IN85 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
PPP4R3AQ6IN85 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
PPP4R3AQ6IN85 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
PPP4R3AQ6IN85 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC27.78■■■□□ 2.04
PPP4R3AQ6IN85 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC27.78■■■□□ 2.04
PPP4R3AQ6IN85 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
PPP4R3AQ6IN85 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
PPP4R3AQ6IN85 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
PPP4R3AQ6IN85 AC007029.1-201ENST00000604183 313 ntBASIC27.77■■■□□ 2.04
PPP4R3AQ6IN85 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC27.77■■■□□ 2.04
PPP4R3AQ6IN85 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
PPP4R3AQ6IN85 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC27.76■■■□□ 2.04
PPP4R3AQ6IN85 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC27.76■■■□□ 2.04
PPP4R3AQ6IN85 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
PPP4R3AQ6IN85 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC27.76■■■□□ 2.03
PPP4R3AQ6IN85 MIR3960-201ENST00000583311 91 ntBASIC27.76■■■□□ 2.03
PPP4R3AQ6IN85 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
PPP4R3AQ6IN85 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC27.76■■■□□ 2.03
PPP4R3AQ6IN85 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC27.75■■■□□ 2.03
PPP4R3AQ6IN85 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms