Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.036e-9■■■■□ 24.9
SRSF1Q07955 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.37e-8■■■■□ 24.9
SRSF1Q07955 PVRIG2P-201ENST00000435460 978 ntBASIC18.02■□□□□ 0.481e-10■■■■□ 24.9
SRSF1Q07955 ZMYND19-202ENST00000471957 1259 ntTSL 215.89■□□□□ 0.137e-8■■■■□ 24.9
SRSF1Q07955 HELLS-207ENST00000419900 711 ntTSL 314.1□□□□□ -0.152e-6■■■■□ 24.9
SRSF1Q07955 HELLS-212ENST00000630929 400 ntTSL 5 BASIC12.86□□□□□ -0.352e-6■■■■□ 24.9
SRSF1Q07955 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.692e-6■■■■□ 24.9
SRSF1Q07955 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC7.99□□□□□ -1.132e-6■■■■□ 24.9
SRSF1Q07955 ZWINT-207ENST00000478181 793 ntTSL 37.65□□□□□ -1.187e-8■■■■□ 24.9
SRSF1Q07955 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.41□□□□□ -1.382e-6■■■■□ 24.9
SRSF1Q07955 TTC21B-202ENST00000392695 1572 ntTSL 55.85□□□□□ -1.477e-8■■■■□ 24.9
SRSF1Q07955 TTC21B-206ENST00000486672 745 ntTSL 24.93□□□□□ -1.627e-8■■■■□ 24.9
SRSF1Q07955 TTC21B-207ENST00000489714 647 ntTSL 34.93□□□□□ -1.627e-8■■■■□ 24.9
SRSF1Q07955 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.34□□□□□ -1.712e-6■■■■□ 24.9
SRSF1Q07955 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.64□□□□□ -1.992e-6■■■■□ 24.9
SRSF1Q07955 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 02e-7■■■■□ 24.9
SRSF1Q07955 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.192e-7■■■■□ 24.9
SRSF1Q07955 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.78□□□□□ -0.22e-7■■■■□ 24.9
SRSF1Q07955 CREBZF-201ENST00000260058 1431 ntTSL 215.13■□□□□ 0.011e-10■■■■□ 24.8
SRSF1Q07955 CREBZF-208ENST00000531515 724 ntTSL 313.84□□□□□ -0.191e-10■■■■□ 24.8
SRSF1Q07955 CREBZF-203ENST00000525639 2850 ntTSL 513.73□□□□□ -0.211e-10■■■■□ 24.8
SRSF1Q07955 CREBZF-202ENST00000490820 4329 ntTSL 1 (best)11.55□□□□□ -0.561e-10■■■■□ 24.8
SRSF1Q07955 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC10.65□□□□□ -0.711e-10■■■■□ 24.8
SRSF1Q07955 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC4.62□□□□□ -1.671e-10■■■■□ 24.8
SRSF1Q07955 RBM6-207ENST00000434592 2342 ntTSL 26.01□□□□□ -1.451e-10■■■■□ 24.8
SRSF1Q07955 LONP1-206ENST00000587552 2816 ntTSL 211.76□□□□□ -0.532e-8■■■■□ 24.8
SRSF1Q07955 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.76□□□□□ -0.215e-8■■■■□ 24.8
SRSF1Q07955 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.88□□□□□ -0.355e-8■■■■□ 24.8
SRSF1Q07955 HNRNPR-203ENST00000374616 2691 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.845e-8■■■■□ 24.8
SRSF1Q07955 HNRNPR-201ENST00000302271 2629 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.925e-8■■■■□ 24.8
SRSF1Q07955 HNRNPR-202ENST00000374612 2694 ntAPPRIS P3 TSL 5 BASIC8.99□□□□□ -0.975e-8■■■■□ 24.8
SRSF1Q07955 HNRNPR-205ENST00000463552 837 ntTSL 46.88□□□□□ -1.315e-8■■■■□ 24.8
SRSF1Q07955 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC6.72□□□□□ -1.331e-6■■■■□ 24.8
SRSF1Q07955 HNRNPR-207ENST00000470941 560 ntTSL 46.49□□□□□ -1.375e-8■■■■□ 24.8
SRSF1Q07955 HNRNPR-208ENST00000476451 814 ntTSL 46.04□□□□□ -1.445e-8■■■■□ 24.8
SRSF1Q07955 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.11■□□□□ 0.812e-7■■■■□ 24.8
SRSF1Q07955 SNHG12-201ENST00000461448 1629 ntTSL 1 (best)17.29■□□□□ 0.362e-7■■■■□ 24.8
SRSF1Q07955 SNHG12-208ENST00000481220 751 ntTSL 317.27■□□□□ 0.362e-7■■■■□ 24.8
SRSF1Q07955 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.74□□□□□ -0.052e-7■■■■□ 24.8
SRSF1Q07955 SNHG12-206ENST00000474814 1903 ntTSL 214.51□□□□□ -0.092e-7■■■■□ 24.8
SRSF1Q07955 SNHG12-205ENST00000470977 1098 ntTSL 1 (best)13.87□□□□□ -0.192e-7■■■■□ 24.8
SRSF1Q07955 SNHG12-209ENST00000481368 1588 ntTSL 1 (best)13.7□□□□□ -0.222e-7■■■■□ 24.8
SRSF1Q07955 SNHG12-204ENST00000464612 719 ntTSL 1 (best)8.14□□□□□ -1.113e-11■■■■□ 24.8
SRSF1Q07955 SNHG12-211ENST00000488745 1365 ntTSL 1 (best) BASIC8.02□□□□□ -1.132e-7■■■■□ 24.8
SRSF1Q07955 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.13□□□□□ -1.433e-11■■■■□ 24.8
SRSF1Q07955 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.24■□□□□ 0.351e-10■■■■□ 24.7
SRSF1Q07955 MTG1-204ENST00000473735 2212 ntTSL 517.1■□□□□ 0.331e-10■■■■□ 24.7
SRSF1Q07955 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.231e-10■■■■□ 24.7
SRSF1Q07955 MTG1-202ENST00000432508 953 ntTSL 215.37■□□□□ 0.051e-10■■■■□ 24.7
SRSF1Q07955 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -01e-10■■■■□ 24.7
SRSF1Q07955 MTG1-206ENST00000492266 413 ntTSL 210.66□□□□□ -0.71e-10■■■■□ 24.7
SRSF1Q07955 MTG1-203ENST00000460848 2730 ntTSL 210.65□□□□□ -0.71e-10■■■■□ 24.7
SRSF1Q07955 DDX46-202ENST00000452510 5689 ntTSL 1 (best) BASIC8.38□□□□□ -1.072e-6■■■■□ 24.7
SRSF1Q07955 DDX46-207ENST00000507392 3565 ntTSL 26.56□□□□□ -1.362e-6■■■■□ 24.7
SRSF1Q07955 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.462e-6■■■■□ 24.7
SRSF1Q07955 DDX46-208ENST00000509178 766 ntTSL 54.51□□□□□ -1.692e-6■■■■□ 24.7
SRSF1Q07955 DDX46-203ENST00000503946 4078 ntTSL 23.58□□□□□ -1.842e-6■■■■□ 24.7
SRSF1Q07955 DDX46-210ENST00000513592 571 ntTSL 43.37□□□□□ -1.872e-6■■■■□ 24.7
SRSF1Q07955 SEC22B-201ENST00000578049 6922 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.972e-7■■■■□ 24.7
SRSF1Q07955 HERC4-214ENST00000513996 944 ntTSL 38.27□□□□□ -1.095e-10■■■■□ 24.7
SRSF1Q07955 HERC4-203ENST00000395185 625 ntTSL 47.65□□□□□ -1.185e-10■■■■□ 24.7
SRSF1Q07955 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.43□□□□□ -1.385e-10■■■■□ 24.7
SRSF1Q07955 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.445e-10■■■■□ 24.7
SRSF1Q07955 HERC4-209ENST00000473533 3593 ntTSL 1 (best)4.85□□□□□ -1.635e-10■■■■□ 24.7
SRSF1Q07955 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.61□□□□□ -1.675e-10■■■■□ 24.7
SRSF1Q07955 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.775e-10■■■■□ 24.7
SRSF1Q07955 AC084337.2-201ENST00000639224 589 ntAPPRIS ALT2 TSL 49.81□□□□□ -0.841e-8■■■■□ 24.6
SRSF1Q07955 SKIV2L-211ENST00000485349 734 ntTSL 216.53■□□□□ 0.241e-7■■■■□ 24.6
SRSF1Q07955 SKIV2L-210ENST00000484835 931 ntTSL 215.13■□□□□ 0.011e-6■■■■□ 24.6
SRSF1Q07955 SKIV2L-206ENST00000470453 455 ntTSL 313.16□□□□□ -0.37e-8■■■■□ 24.6
SRSF1Q07955 IST1-212ENST00000538104 531 ntTSL 47.82□□□□□ -1.162e-6■■■■□ 24.6
SRSF1Q07955 MSH5-217ENST00000494458 520 ntTSL 25.6□□□□□ -1.512e-10■■■■□ 24.5
SRSF1Q07955 MVD-211ENST00000565720 436 ntTSL 317.93■□□□□ 0.461e-8■■■■□ 24.5
SRSF1Q07955 PUM1-202ENST00000373741 4242 ntTSL 1 (best) BASIC9.14□□□□□ -0.953e-8■■■■□ 24.5
SRSF1Q07955 PUM1-201ENST00000257075 5360 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.033e-8■■■■□ 24.5
SRSF1Q07955 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC6.98□□□□□ -1.293e-8■■■■□ 24.5
SRSF1Q07955 PUM1-203ENST00000373742 3515 ntTSL 2 BASIC6.88□□□□□ -1.313e-8■■■■□ 24.5
SRSF1Q07955 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC6.45□□□□□ -1.383e-8■■■■□ 24.5
SRSF1Q07955 PUM1-214ENST00000525843 4528 ntTSL 56.12□□□□□ -1.433e-8■■■■□ 24.5
SRSF1Q07955 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.493e-8■■■■□ 24.5
SRSF1Q07955 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.33□□□□□ -1.563e-8■■■■□ 24.5
SRSF1Q07955 METTL3-208ENST00000539760 1462 ntTSL 29.57□□□□□ -0.882e-6■■■■□ 24.5
SRSF1Q07955 METTL3-204ENST00000396522 2523 ntTSL 28.95□□□□□ -0.982e-6■■■■□ 24.5
SRSF1Q07955 METTL3-212ENST00000544500 1789 ntTSL 28.22□□□□□ -1.092e-6■■■■□ 24.5
SRSF1Q07955 AC004674.1-201ENST00000458400 739 ntBASIC10.71□□□□□ -0.698e-8■■■■□ 24.4
SRSF1Q07955 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.5■■□□□ 1.031e-7■■■■□ 24.4
SRSF1Q07955 CNOT2-206ENST00000547780 582 ntTSL 519.02■□□□□ 0.641e-7■■■■□ 24.4
SRSF1Q07955 PPP2R5C-207ENST00000553730 1227 ntTSL 218.93■□□□□ 0.621e-7■■■■□ 24.4
SRSF1Q07955 CNOT2-236ENST00000552231 1545 ntTSL 216.57■□□□□ 0.241e-7■■■■□ 24.4
SRSF1Q07955 CNOT2-227ENST00000551043 2288 ntTSL 214.32□□□□□ -0.121e-7■■■■□ 24.4
SRSF1Q07955 CNOT2-220ENST00000549750 1085 ntTSL 513.89□□□□□ -0.191e-7■■■■□ 24.4
SRSF1Q07955 CNOT2-209ENST00000548159 2549 ntTSL 1 (best)12.13□□□□□ -0.471e-7■■■■□ 24.4
SRSF1Q07955 PPP2R5C-227ENST00000557268 2013 ntTSL 211.91□□□□□ -0.51e-7■■■■□ 24.4
SRSF1Q07955 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC11.89□□□□□ -0.511e-7■■■■□ 24.4
SRSF1Q07955 PPP2R5C-209ENST00000553890 492 ntTSL 310.67□□□□□ -0.71e-7■■■■□ 24.4
SRSF1Q07955 PPP2R5C-224ENST00000556946 735 ntTSL 2 BASIC10.67□□□□□ -0.71e-7■■■■□ 24.4
SRSF1Q07955 CNOT2-241ENST00000552915 1071 ntTSL 510.4□□□□□ -0.741e-7■■■■□ 24.4
SRSF1Q07955 CNOT2-239ENST00000552483 895 ntTSL 510.01□□□□□ -0.811e-7■■■■□ 24.4
SRSF1Q07955 CNOT2-223ENST00000550160 993 ntTSL 59.94□□□□□ -0.821e-7■■■■□ 24.4
SRSF1Q07955 CNOT2-214ENST00000548741 536 ntTSL 49.88□□□□□ -0.831e-7■■■■□ 24.4
Retrieved 100 of 14,836 protein–RNA pairs in 356.3 ms