RNA–Protein interactions for RNA: ENST00000354283.8

DDX46-201, Transcript of DEAD-box helicase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX46, Length 3,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX46-201ENST00000354283 NISCHQ9Y2I1 1504 aa14.1□□□□□ -0.15
DDX46-201ENST00000354283 DCAF8L2P0C7V8 631 aa13.85□□□□□ -0.19
DDX46-201ENST00000354283 SHROOM4Q9ULL8 1493 aa13.51□□□□□ -0.25
DDX46-201ENST00000354283 SUPT5HO00267 1087 aaKnown RBP13.47□□□□□ -0.25
DDX46-201ENST00000354283 EHMT2Q96KQ7 1210 aa13.03□□□□□ -0.32
DDX46-201ENST00000354283 FAM9AQ8IZU1 332 aaPredicted RBP12.69□□□□□ -0.38
DDX46-201ENST00000354283 PCGF6Q9BYE7 350 aa12.6□□□□□ -0.39
DDX46-201ENST00000354283 TTBK1Q5TCY1 1321 aaPredicted RBP12.52□□□□□ -0.41
DDX46-201ENST00000354283 LOC105371045A0A1W2PR82 267 aa12.41□□□□□ -0.42
DDX46-201ENST00000354283 PPARGC1BQ86YN6 1023 aaKnown RBP12.39□□□□□ -0.43
DDX46-201ENST00000354283 CHIC1Q5VXU3 224 aa12.32□□□□□ -0.44
DDX46-201ENST00000354283 RANGAP1P46060 587 aaPredicted RBP12.28□□□□□ -0.44
DDX46-201ENST00000354283 TRIM41Q8WV44 630 aa12.27□□□□□ -0.45
DDX46-201ENST00000354283 HRCP23327 699 aa12□□□□□ -0.49
DDX46-201ENST00000354283 UBTFP17480 764 aaKnown RBP11.97□□□□□ -0.49
DDX46-201ENST00000354283 ABCC9O60706 1549 aa11.95□□□□□ -0.5
DDX46-201ENST00000354283 CCER1Q8TC90 406 aaPredicted RBP11.94□□□□□ -0.5
DDX46-201ENST00000354283 PABPN1Q86U42 306 aaKnown RBP eCLIP11.91□□□□□ -0.5
DDX46-201ENST00000354283 TRIM26Q12899 539 aaPredicted RBP11.88□□□□□ -0.51
DDX46-201ENST00000354283 APLP2Q06481 763 aa11.85□□□□□ -0.51
DDX46-201ENST00000354283 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.82□□□□□ -0.52
DDX46-201ENST00000354283 ATP1B4Q9UN42 357 aaPredicted RBP11.81□□□□□ -0.52
DDX46-201ENST00000354283 MYO15BQ96JP2 1530 aa11.79□□□□□ -0.52
DDX46-201ENST00000354283 YTHDC1Q96MU7 727 aaKnown RBP11.77□□□□□ -0.52
DDX46-201ENST00000354283 HNRNPUL2Q1KMD3 747 aaKnown RBP11.74□□□□□ -0.53
DDX46-201ENST00000354283 ZCCHC6Q5VYS8 1495 aaKnown RBP11.73□□□□□ -0.53
DDX46-201ENST00000354283 ITGAEP38570 1179 aa11.71□□□□□ -0.53
DDX46-201ENST00000354283 ZEB1P37275 1124 aaPredicted RBP11.64□□□□□ -0.55
DDX46-201ENST00000354283 SCRIBQ14160 1630 aa11.6□□□□□ -0.55
DDX46-201ENST00000354283 CENPBP07199 599 aaPredicted RBP11.45□□□□□ -0.58
DDX46-201ENST00000354283 CNGB1Q14028 1251 aaPredicted RBP11.43□□□□□ -0.58
DDX46-201ENST00000354283 DIEXFQ68CQ4 756 aaKnown RBP11.42□□□□□ -0.58
DDX46-201ENST00000354283 RSF1Q96T23 1441 aaPredicted RBP11.42□□□□□ -0.58
DDX46-201ENST00000354283 P3H3Q8IVL6 736 aa11.39□□□□□ -0.59
DDX46-201ENST00000354283 CSRNP3Q8WYN3 585 aa11.39□□□□□ -0.59
DDX46-201ENST00000354283 CECR2Q9BXF3 1484 aa11.36□□□□□ -0.59
DDX46-201ENST00000354283 CCDC180Q9P1Z9 1646 aa11.34□□□□□ -0.59
DDX46-201ENST00000354283 ARID3CA6NKF2 412 aa11.32□□□□□ -0.6
DDX46-201ENST00000354283 NEUROD1Q13562 356 aa11.3□□□□□ -0.6
DDX46-201ENST00000354283 FAM50AQ14320 339 aaKnown RBP11.3□□□□□ -0.6
DDX46-201ENST00000354283 GTF3C3Q9Y5Q9 886 aa11.28□□□□□ -0.6
DDX46-201ENST00000354283 DCAF1Q9Y4B6 1507 aa11.27□□□□□ -0.61
DDX46-201ENST00000354283 POLR3GLQ9BT43 218 aa11.25□□□□□ -0.61
DDX46-201ENST00000354283 BCANQ96GW7 911 aa11.17□□□□□ -0.62
DDX46-201ENST00000354283 RB1CC1Q8TDY2 1594 aa11.17□□□□□ -0.62
DDX46-201ENST00000354283 ZNF316A6NFI3 1004 aaPredicted RBP11.16□□□□□ -0.62
DDX46-201ENST00000354283 SCAF1Q9H7N4 1312 aaKnown RBP11.15□□□□□ -0.62
DDX46-201ENST00000354283 HIRIP3Q9BW71 556 aaPredicted RBP11.15□□□□□ -0.62
DDX46-201ENST00000354283 MROH2BQ7Z745 1585 aa11.13□□□□□ -0.63
DDX46-201ENST00000354283 SOGA1O94964 1423 aa11.12□□□□□ -0.63
DDX46-201ENST00000354283 PELP1Q8IZL8 1130 aaKnown RBP11.11□□□□□ -0.63
DDX46-201ENST00000354283 ACIN1Q9UKV3 1341 aaKnown RBP11.11□□□□□ -0.63
DDX46-201ENST00000354283 FBLN2P98095 1184 aa11.09□□□□□ -0.63
DDX46-201ENST00000354283 MIER1Q8N108 512 aa11.08□□□□□ -0.64
DDX46-201ENST00000354283 TRIM52Q96A61 297 aa11.08□□□□□ -0.64
DDX46-201ENST00000354283 ABCC8Q09428 1581 aa11.06□□□□□ -0.64
DDX46-201ENST00000354283 CEP162Q5TB80 1403 aa11.06□□□□□ -0.64
DDX46-201ENST00000354283 ZNF326Q5BKZ1 582 aaKnown RBP11.04□□□□□ -0.64
DDX46-201ENST00000354283 CCDC88BA6NC98 1476 aa11.03□□□□□ -0.64
DDX46-201ENST00000354283 NEFLP07196 543 aa11.02□□□□□ -0.64
DDX46-201ENST00000354283 CHIC2Q9UKJ5 165 aa11□□□□□ -0.65
DDX46-201ENST00000354283 DDX10Q13206 875 aaKnown RBP11□□□□□ -0.65
DDX46-201ENST00000354283 CLIP1P30622 1438 aa11□□□□□ -0.65
DDX46-201ENST00000354283 SENP3-EIF4A1A0A087X0R7 540 aa10.99□□□□□ -0.65
DDX46-201ENST00000354283 WIZO95785 1651 aa10.98□□□□□ -0.65
DDX46-201ENST00000354283 RUSC2Q8N2Y8 1516 aa10.97□□□□□ -0.65
DDX46-201ENST00000354283 MYT1LQ9UL68 1186 aa10.97□□□□□ -0.65
DDX46-201ENST00000354283 WRNQ14191 1432 aaPredicted RBP eCLIP10.97□□□□□ -0.65
DDX46-201ENST00000354283 ZNF777Q9ULD5 760 aaPredicted RBP10.94□□□□□ -0.66
DDX46-201ENST00000354283 KANK4Q5T7N3 995 aaPredicted RBP10.94□□□□□ -0.66
DDX46-201ENST00000354283 NACADO15069 1562 aa10.93□□□□□ -0.66
DDX46-201ENST00000354283 SIN3AQ96ST3 1273 aa10.91□□□□□ -0.66
DDX46-201ENST00000354283 TNIKQ9UKE5 1360 aa10.89□□□□□ -0.67
DDX46-201ENST00000354283 ERICH6Q7L0X2 663 aa10.88□□□□□ -0.67
DDX46-201ENST00000354283 BAZ1AQ9NRL2 1556 aaPredicted RBP10.86□□□□□ -0.67
DDX46-201ENST00000354283 RRP7BPQ9NSQ0 103 aa10.86□□□□□ -0.67
DDX46-201ENST00000354283 BAZ1BQ9UIG0 1483 aaKnown RBP10.86□□□□□ -0.67
DDX46-201ENST00000354283 GOLGA3Q08378 1498 aa10.85□□□□□ -0.67
DDX46-201ENST00000354283 ANP32CO43423 234 aa10.84□□□□□ -0.67
DDX46-201ENST00000354283 IRX6P78412 446 aaPredicted RBP10.84□□□□□ -0.67
DDX46-201ENST00000354283 FKBP8Q14318 412 aa10.82□□□□□ -0.68
DDX46-201ENST00000354283 SALL2Q9Y467 1007 aaPredicted RBP10.8□□□□□ -0.68
DDX46-201ENST00000354283 SLC4A1APQ9BWU0 796 aaKnown RBP10.78□□□□□ -0.68
DDX46-201ENST00000354283 SENP3Q9H4L4 574 aaPredicted RBP10.77□□□□□ -0.68
DDX46-201ENST00000354283 FAM9BQ8IZU0 186 aa10.77□□□□□ -0.69
DDX46-201ENST00000354283 HNRNPUQ00839 825 aaKnown RBP eCLIP10.75□□□□□ -0.69
DDX46-201ENST00000354283 KCNH8Q96L42 1107 aa10.75□□□□□ -0.69
DDX46-201ENST00000354283 CEP164Q9UPV0 1460 aa10.74□□□□□ -0.69
DDX46-201ENST00000354283 TONSLQ96HA7 1378 aa10.74□□□□□ -0.69
DDX46-201ENST00000354283 KDM2AQ9Y2K7 1162 aa10.74□□□□□ -0.69
DDX46-201ENST00000354283 RAPGEF2Q9Y4G8 1499 aa10.74□□□□□ -0.69
DDX46-201ENST00000354283 MTUS2Q5JR59 1369 aa10.73□□□□□ -0.69
DDX46-201ENST00000354283 FOXD1Q16676 465 aa10.72□□□□□ -0.69
DDX46-201ENST00000354283 EEA1Q15075 1411 aa10.72□□□□□ -0.69
DDX46-201ENST00000354283 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.71□□□□□ -0.71e-6■■□□□ 13.4
DDX46-201ENST00000354283 KIF27Q86VH2 1401 aa10.7□□□□□ -0.7
DDX46-201ENST00000354283 CUX2O14529 1486 aa10.7□□□□□ -0.7
DDX46-201ENST00000354283 TDRD9Q8NDG6 1382 aaKnown RBP10.67□□□□□ -0.7
DDX46-201ENST00000354283 CARMIL1Q5VZK9 1371 aa10.66□□□□□ -0.7
DDX46-201ENST00000354283 VPS8Q8N3P4 1428 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms